Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17220

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,784,599	+		LRK53_RS17215	0.23	-1.3
3,784,599	+		LRK53_RS17215	0.23	-1.0
3,784,600	-		LRK53_RS17215	0.23	-1.0
3,784,600	-		LRK53_RS17215	0.23	+0.6
3,784,600	-		LRK53_RS17215	0.23	-0.0
3,784,600	-		LRK53_RS17215	0.23	-0.8
3,784,600	-		LRK53_RS17215	0.23	+1.0
3,784,600	-		LRK53_RS17215	0.23	-1.6
3,784,600	-		LRK53_RS17215	0.23	-1.0
3,784,600	-		LRK53_RS17215	0.23	-0.6
3,784,600	-		LRK53_RS17215	0.23	-0.0
3,784,600	-		LRK53_RS17215	0.23	-1.3
3,784,659	+		LRK53_RS17215	0.29	-1.6
3,784,659	+		LRK53_RS17215	0.29	-1.8
3,784,659	+		LRK53_RS17215	0.29	-0.0
3,784,659	+		LRK53_RS17215	0.29	-0.0
3,784,659	+		LRK53_RS17215	0.29	-0.6
3,784,659	+		LRK53_RS17215	0.29	+1.0
3,784,659	+		LRK53_RS17215	0.29	+0.2
3,784,659	+		LRK53_RS17215	0.29	-1.6
3,784,659	+		LRK53_RS17215	0.29	-0.1
3,784,659	+		LRK53_RS17215	0.29	+1.0
3,784,659	+		LRK53_RS17215	0.29	-1.0
3,784,659	+		LRK53_RS17215	0.29	+1.0
3,784,659	+		LRK53_RS17215	0.29	-0.6
3,784,660	-		LRK53_RS17215	0.29	-0.6
3,784,660	-		LRK53_RS17215	0.29	-1.8
3,784,660	-		LRK53_RS17215	0.29	+0.1
3,784,660	-		LRK53_RS17215	0.29	-0.5
3,784,660	-		LRK53_RS17215	0.29	-1.8
3,784,660	-		LRK53_RS17215	0.29	-0.2
3,784,660	-		LRK53_RS17215	0.29	-1.6
3,784,707	+		LRK53_RS17215	0.33	+1.0
3,784,708	-		LRK53_RS17215	0.33	-1.9
3,784,708	-		LRK53_RS17215	0.33	-1.0
3,784,719	+		LRK53_RS17215	0.34	-1.6
3,784,719	+		LRK53_RS17215	0.34	+0.4
3,784,719	+		LRK53_RS17215	0.34	+1.0
3,784,719	+		LRK53_RS17215	0.34	-0.0
3,784,719	+		LRK53_RS17215	0.34	-0.6
3,784,719	+		LRK53_RS17215	0.34	-0.7
3,784,719	+		LRK53_RS17215	0.34	-0.6
3,784,719	+		LRK53_RS17215	0.34	-0.6
3,784,720	-		LRK53_RS17215	0.34	-1.0
3,784,720	-		LRK53_RS17215	0.34	+1.0
3,784,720	-		LRK53_RS17215	0.34	+1.2
3,784,720	-		LRK53_RS17215	0.34	-1.0
3,784,720	-		LRK53_RS17215	0.34	-0.6
3,784,720	-		LRK53_RS17215	0.34	-0.4
3,784,836	+		LRK53_RS17215	0.45	-0.0
3,784,837	-		LRK53_RS17215	0.45	-1.2
3,784,869	+		LRK53_RS17215	0.48	-1.5
3,784,869	+		LRK53_RS17215	0.48	-0.6
3,784,869	+		LRK53_RS17215	0.48	+1.0
3,784,869	+		LRK53_RS17215	0.48	-0.0
3,784,869	+		LRK53_RS17215	0.48	-0.0
3,784,869	+		LRK53_RS17215	0.48	-0.2
3,784,869	+		LRK53_RS17215	0.48	-1.2
3,784,870	-		LRK53_RS17215	0.48	-0.0
3,784,870	-		LRK53_RS17215	0.48	-0.6
3,784,870	-		LRK53_RS17215	0.48	+2.0
3,784,870	-		LRK53_RS17215	0.48	+0.2
3,784,870	-		LRK53_RS17215	0.48	+3.0
3,784,870	-		LRK53_RS17215	0.48	-0.9
3,784,872	+		LRK53_RS17215	0.48	-1.8
3,784,872	+		LRK53_RS17215	0.48	+0.7
3,784,872	+		LRK53_RS17215	0.48	+0.4
3,784,872	+		LRK53_RS17215	0.48	-0.2
3,784,873	-		LRK53_RS17215	0.49	-0.0
3,784,873	-		LRK53_RS17215	0.49	+0.4
3,784,873	-		LRK53_RS17215	0.49	-0.0
3,784,873	-		LRK53_RS17215	0.49	-0.6
3,784,873	-		LRK53_RS17215	0.49	-0.6
3,784,873	-		LRK53_RS17215	0.49	-0.1
3,784,980	+		LRK53_RS17215	0.58	-1.2
3,784,980	+		LRK53_RS17215	0.58	-1.8
3,784,981	-		LRK53_RS17215	0.58	-0.0
3,784,992	+		LRK53_RS17215	0.59	-0.6
3,784,992	+		LRK53_RS17215	0.59	-2.0
3,784,993	-		LRK53_RS17215	0.60	-1.0
3,784,993	-		LRK53_RS17215	0.60	-2.2
3,785,019	+		LRK53_RS17215	0.62	-0.0
3,785,019	+		LRK53_RS17215	0.62	-0.3
3,785,019	+		LRK53_RS17215	0.62	-2.0
3,785,019	+		LRK53_RS17215	0.62	+1.0
3,785,019	+		LRK53_RS17215	0.62	-0.7
3,785,020	-		LRK53_RS17215	0.62	-1.2
3,785,020	-		LRK53_RS17215	0.62	-0.2
3,785,020	-		LRK53_RS17215	0.62	-0.3
3,785,020	-		LRK53_RS17215	0.62	-1.0
3,785,020	-		LRK53_RS17215	0.62	-0.1
3,785,038	+		LRK53_RS17215	0.64	-0.6
3,785,395	+				-1.0
3,785,395	+				-0.1
3,785,395	+				-0.9
3,785,395	+				-2.0
3,785,395	+				-1.1
3,785,395	+				-0.0
3,785,395	+				+2.0
3,785,395	+				-0.4
3,785,395	+				-0.0
3,785,395	+				-0.2
3,785,396	-				+0.5
3,785,396	-				-1.2
3,785,396	-				-0.2
3,785,396	-				+0.4
3,785,396	-				-3.4
3,785,396	-				+0.3
3,785,396	-				-0.6
3,785,396	-				-0.6
3,785,501	+				+1.0
3,785,504	-				+1.0
3,785,666	-		LRK53_RS17220	0.26	+1.0
3,785,666	-		LRK53_RS17220	0.26	-1.3
3,785,666	-		LRK53_RS17220	0.26	-3.6
3,785,666	-		LRK53_RS17220	0.26	-1.6
3,785,666	-		LRK53_RS17220	0.26	-1.0
3,786,097	+				+1.0
3,786,098	-				-0.0
3,786,155	+				-1.0
3,786,155	+				+1.0
3,786,155	+				-0.5
3,786,155	+				-0.8
3,786,155	+				-1.6
3,786,155	+				-0.0
3,786,155	+				-0.2
3,786,155	+				-0.0
3,786,155	+				+1.4
3,786,155	+				-0.7
3,786,156	-				+0.3
3,786,156	-				-0.2
3,786,156	-				+1.0
3,786,156	-				+1.0
3,786,156	-				-0.3
3,786,156	-				-2.5
3,786,156	-				-0.3
3,786,180	-				+1.0
3,786,180	-				-0.0
3,786,182	+				-0.0
3,786,182	+				-1.0
3,786,182	+				-2.0
3,786,182	+				-0.2
3,786,182	+				-0.5
3,786,182	+				+0.3
3,786,182	+				-1.8
3,786,183	-				-1.0
3,786,183	-				-0.9
3,786,183	-				-0.0
3,786,183	-				+1.4
3,786,183	-				-0.8
3,786,183	-				-0.9
3,786,416	+		LRK53_RS17225	0.11	+2.0
3,786,416	+		LRK53_RS17225	0.11	-1.1
3,786,416	+		LRK53_RS17225	0.11	-0.9
3,786,416	+		LRK53_RS17225	0.11	+1.0
3,786,494	+		LRK53_RS17225	0.14	+0.7
3,786,494	+		LRK53_RS17225	0.14	-1.6
3,786,494	+		LRK53_RS17225	0.14	-0.6
3,786,494	+		LRK53_RS17225	0.14	-1.0
3,786,495	-		LRK53_RS17225	0.14	-0.0
3,786,539	+		LRK53_RS17225	0.15	+0.4
3,786,539	+		LRK53_RS17225	0.15	+2.0
3,786,539	+		LRK53_RS17225	0.15	-0.4
3,786,539	+		LRK53_RS17225	0.15	-2.0
3,786,539	+		LRK53_RS17225	0.15	-0.6
3,786,539	+		LRK53_RS17225	0.15	-1.6
3,786,539	+		LRK53_RS17225	0.15	-0.0
3,786,539	+		LRK53_RS17225	0.15	-1.6
3,786,539	+		LRK53_RS17225	0.15	-0.0
3,786,539	+		LRK53_RS17225	0.15	-1.0
3,786,540	-		LRK53_RS17225	0.15	-0.0
3,786,540	-		LRK53_RS17225	0.15	+1.0
3,786,540	-		LRK53_RS17225	0.15	-1.1
3,786,540	-		LRK53_RS17225	0.15	+1.0
3,786,540	-		LRK53_RS17225	0.15	+2.0
3,786,540	-		LRK53_RS17225	0.15	-2.6
3,786,540	-		LRK53_RS17225	0.15	+0.1
3,786,540	-		LRK53_RS17225	0.15	-0.6
3,786,540	-		LRK53_RS17225	0.15	-1.2
3,786,540	-		LRK53_RS17225	0.15	-1.3
3,786,699	-		LRK53_RS17225	0.21	+0.4
3,786,699	-		LRK53_RS17225	0.21	-0.8
3,786,740	+		LRK53_RS17225	0.22	-0.8
3,786,740	+		LRK53_RS17225	0.22	-0.9
3,786,740	+		LRK53_RS17225	0.22	-0.6
3,786,740	+		LRK53_RS17225	0.22	-0.6
3,786,740	+		LRK53_RS17225	0.22	-1.6
3,786,740	+		LRK53_RS17225	0.22	-2.3
3,786,740	+		LRK53_RS17225	0.22	-0.6
3,786,740	+		LRK53_RS17225	0.22	-0.6
3,786,740	+		LRK53_RS17225	0.22	-0.0
3,786,740	+		LRK53_RS17225	0.22	-1.5
3,786,740	+		LRK53_RS17225	0.22	+2.0
3,786,740	+		LRK53_RS17225	0.22	-0.0
3,786,740	+		LRK53_RS17225	0.22	-0.6
3,786,741	-		LRK53_RS17225	0.22	-1.6
3,786,741	-		LRK53_RS17225	0.22	-0.8
3,786,741	-		LRK53_RS17225	0.22	-1.3
3,786,741	-		LRK53_RS17225	0.22	+1.0
3,786,741	-		LRK53_RS17225	0.22	-1.6
3,786,745	-		LRK53_RS17225	0.23	-1.5
3,786,745	-		LRK53_RS17225	0.23	-0.6
3,786,881	+		LRK53_RS17225	0.27	-0.2
3,786,899	+		LRK53_RS17225	0.28	+0.3
3,786,899	+		LRK53_RS17225	0.28	+0.4
3,786,899	+		LRK53_RS17225	0.28	-1.8
3,786,899	+		LRK53_RS17225	0.28	-0.0
3,786,899	+		LRK53_RS17225	0.28	+1.3
3,786,899	+		LRK53_RS17225	0.28	-0.0
3,786,899	+		LRK53_RS17225	0.28	-0.6
3,786,899	+		LRK53_RS17225	0.28	-1.0
3,786,899	+		LRK53_RS17225	0.28	-1.0
3,786,899	+		LRK53_RS17225	0.28	-1.0
3,786,899	+		LRK53_RS17225	0.28	-1.3
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,899	+		LRK53_RS17225	0.28	-0.6
3,786,899	+		LRK53_RS17225	0.28	+1.6
3,786,899	+		LRK53_RS17225	0.28	-3.2
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,899	+		LRK53_RS17225	0.28	+0.6
3,786,899	+		LRK53_RS17225	0.28	-1.0
3,786,899	+		LRK53_RS17225	0.28	-0.6
3,786,899	+		LRK53_RS17225	0.28	+0.4
3,786,899	+		LRK53_RS17225	0.28	+2.0
3,786,899	+		LRK53_RS17225	0.28	-1.8
3,786,899	+		LRK53_RS17225	0.28	-1.0
3,786,899	+		LRK53_RS17225	0.28	-0.9
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,899	+		LRK53_RS17225	0.28	+2.0
3,786,899	+		LRK53_RS17225	0.28	-0.3
3,786,899	+		LRK53_RS17225	0.28	-0.6
3,786,899	+		LRK53_RS17225	0.28	-1.3
3,786,899	+		LRK53_RS17225	0.28	-0.3
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,899	+		LRK53_RS17225	0.28	+0.1
3,786,899	+		LRK53_RS17225	0.28	+1.0
3,786,900	-		LRK53_RS17225	0.28	-2.1
3,786,900	-		LRK53_RS17225	0.28	+0.4
3,786,900	-		LRK53_RS17225	0.28	-0.6
3,786,900	-		LRK53_RS17225	0.28	-1.2
3,786,900	-		LRK53_RS17225	0.28	-0.8
3,786,900	-		LRK53_RS17225	0.28	-0.8
3,786,900	-		LRK53_RS17225	0.28	-0.9
3,786,900	-		LRK53_RS17225	0.28	-1.6
3,786,900	-		LRK53_RS17225	0.28	-0.4
3,786,900	-		LRK53_RS17225	0.28	+1.0
3,786,900	-		LRK53_RS17225	0.28	-1.0
3,786,900	-		LRK53_RS17225	0.28	+0.1
3,786,900	-		LRK53_RS17225	0.28	-1.2
3,786,900	-		LRK53_RS17225	0.28	-0.3
3,786,900	-		LRK53_RS17225	0.28	-0.2
3,786,900	-		LRK53_RS17225	0.28	+0.4
3,786,900	-		LRK53_RS17225	0.28	-0.4
3,786,900	-		LRK53_RS17225	0.28	+1.8
3,786,900	-		LRK53_RS17225	0.28	-0.1
3,786,900	-		LRK53_RS17225	0.28	-1.8
3,786,900	-		LRK53_RS17225	0.28	+0.3
3,786,900	-		LRK53_RS17225	0.28	-0.6
3,786,900	-		LRK53_RS17225	0.28	-1.0
3,786,900	-		LRK53_RS17225	0.28	-1.2
3,786,900	-		LRK53_RS17225	0.28	+0.6
3,786,986	+		LRK53_RS17225	0.31	-0.6
3,786,986	+		LRK53_RS17225	0.31	-1.2
3,786,986	+		LRK53_RS17225	0.31	-0.2
3,786,987	-		LRK53_RS17225	0.31	-1.1
3,786,987	-		LRK53_RS17225	0.31	-0.6