Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16900

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,709,960	+		LRK53_RS16890	0.20	+2.3
3,709,960	+		LRK53_RS16890	0.20	-1.0
3,709,960	+		LRK53_RS16890	0.20	-0.6
3,709,960	+		LRK53_RS16890	0.20	-0.7
3,709,961	-		LRK53_RS16890	0.20	+2.0
3,709,961	-		LRK53_RS16890	0.20	-1.9
3,709,961	-		LRK53_RS16890	0.20	-0.3
3,709,961	-		LRK53_RS16890	0.20	+0.4
3,710,144	+		LRK53_RS16890	0.50	-1.6
3,710,144	+		LRK53_RS16890	0.50	+0.7
3,710,198	+		LRK53_RS16890	0.59	-1.0
3,710,198	+		LRK53_RS16890	0.59	-0.6
3,710,198	+		LRK53_RS16890	0.59	-1.1
3,710,198	+		LRK53_RS16890	0.59	-1.0
3,710,198	+		LRK53_RS16890	0.59	-0.3
3,710,198	+		LRK53_RS16890	0.59	-0.0
3,710,199	-		LRK53_RS16890	0.59	-1.3
3,710,199	-		LRK53_RS16890	0.59	-0.0
3,710,258	-		LRK53_RS16890	0.68	-0.0
3,710,260	+		LRK53_RS16890	0.69	+0.3
3,710,260	+		LRK53_RS16890	0.69	-2.2
3,710,260	+		LRK53_RS16890	0.69	+2.0
3,710,260	+		LRK53_RS16890	0.69	-0.6
3,710,260	+		LRK53_RS16890	0.69	-0.6
3,710,260	+		LRK53_RS16890	0.69	-1.3
3,710,260	+		LRK53_RS16890	0.69	-1.8
3,710,260	+		LRK53_RS16890	0.69	-1.6
3,710,260	+		LRK53_RS16890	0.69	-0.0
3,710,261	-		LRK53_RS16890	0.69	-0.2
3,710,261	-		LRK53_RS16890	0.69	-1.0
3,710,261	-		LRK53_RS16890	0.69	+0.4
3,710,261	-		LRK53_RS16890	0.69	-0.6
3,710,261	-		LRK53_RS16890	0.69	+0.3
3,710,261	-		LRK53_RS16890	0.69	-1.8
3,710,261	-		LRK53_RS16890	0.69	-0.3
3,710,294	+		LRK53_RS16890	0.74	+1.4
3,710,294	+		LRK53_RS16890	0.74	-1.6
3,710,294	+		LRK53_RS16890	0.74	-0.3
3,710,294	+		LRK53_RS16890	0.74	-0.6
3,710,295	-		LRK53_RS16890	0.74	+0.4
3,710,295	-		LRK53_RS16890	0.74	+1.0
3,710,409	+				+0.2
3,710,410	-				-1.6
3,710,544	+		LRK53_RS16895	0.18	-0.5
3,710,544	+		LRK53_RS16895	0.18	-0.0
3,710,544	+		LRK53_RS16895	0.18	-0.0
3,710,544	+		LRK53_RS16895	0.18	-0.0
3,710,544	+		LRK53_RS16895	0.18	+0.4
3,710,544	+		LRK53_RS16895	0.18	-1.5
3,710,544	+		LRK53_RS16895	0.18	-0.6
3,710,544	+		LRK53_RS16895	0.18	+0.2
3,710,544	+		LRK53_RS16895	0.18	-1.2
3,710,545	-		LRK53_RS16895	0.18	-0.0
3,710,545	-		LRK53_RS16895	0.18	-1.6
3,710,545	-		LRK53_RS16895	0.18	+1.0
3,710,545	-		LRK53_RS16895	0.18	-0.9
3,710,545	-		LRK53_RS16895	0.18	-1.3
3,710,545	-		LRK53_RS16895	0.18	-1.3
3,710,545	-		LRK53_RS16895	0.18	-1.3
3,710,545	-		LRK53_RS16895	0.18	-0.2
3,710,545	-		LRK53_RS16895	0.18	-0.0
3,710,545	-		LRK53_RS16895	0.18	-0.6
3,710,545	-		LRK53_RS16895	0.18	-1.3
3,710,545	-		LRK53_RS16895	0.18	-0.1
3,710,545	-		LRK53_RS16895	0.18	-0.6
3,710,545	-		LRK53_RS16895	0.18	-1.8
3,710,545	-		LRK53_RS16895	0.18	-0.6
3,710,559	+		LRK53_RS16895	0.21	-1.1
3,710,559	+		LRK53_RS16895	0.21	-0.3
3,710,559	+		LRK53_RS16895	0.21	+1.0
3,710,559	+		LRK53_RS16895	0.21	+0.1
3,710,559	+		LRK53_RS16895	0.21	-1.4
3,710,559	+		LRK53_RS16895	0.21	+3.0
3,710,559	+		LRK53_RS16895	0.21	+0.6
3,710,559	+		LRK53_RS16895	0.21	-0.9
3,710,559	+		LRK53_RS16895	0.21	-1.5
3,710,559	+		LRK53_RS16895	0.21	+0.4
3,710,559	+		LRK53_RS16895	0.21	-0.3
3,710,559	+		LRK53_RS16895	0.21	+0.4
3,710,559	+		LRK53_RS16895	0.21	-2.0
3,710,559	+		LRK53_RS16895	0.21	-1.2
3,710,559	+		LRK53_RS16895	0.21	-0.0
3,710,559	+		LRK53_RS16895	0.21	-2.3
3,710,559	+		LRK53_RS16895	0.21	-0.0
3,710,560	-		LRK53_RS16895	0.21	-0.7
3,710,560	-		LRK53_RS16895	0.21	-2.0
3,710,560	-		LRK53_RS16895	0.21	-0.3
3,710,560	-		LRK53_RS16895	0.21	-0.6
3,710,560	-		LRK53_RS16895	0.21	-2.0
3,710,560	-		LRK53_RS16895	0.21	-1.6
3,710,560	-		LRK53_RS16895	0.21	-0.9
3,710,560	-		LRK53_RS16895	0.21	-1.8
3,710,560	-		LRK53_RS16895	0.21	+1.0
3,710,560	-		LRK53_RS16895	0.21	-1.0
3,710,560	-		LRK53_RS16895	0.21	-1.0
3,710,560	-		LRK53_RS16895	0.21	-1.0
3,710,560	-		LRK53_RS16895	0.21	-1.0
3,710,601	+		LRK53_RS16895	0.31	-1.0
3,710,601	+		LRK53_RS16895	0.31	-0.3
3,710,601	+		LRK53_RS16895	0.31	+2.0
3,710,602	-		LRK53_RS16895	0.31	+0.3
3,710,662	-		LRK53_RS16895	0.45	-1.6
3,710,662	-		LRK53_RS16895	0.45	-1.8
3,710,697	+		LRK53_RS16895	0.53	-1.3
3,710,697	+		LRK53_RS16895	0.53	-1.1
3,710,697	+		LRK53_RS16895	0.53	-0.0
3,710,697	+		LRK53_RS16895	0.53	-1.5
3,710,697	+		LRK53_RS16895	0.53	-0.3
3,710,697	+		LRK53_RS16895	0.53	-1.5
3,710,697	+		LRK53_RS16895	0.53	-1.5
3,710,697	+		LRK53_RS16895	0.53	-0.3
3,710,697	+		LRK53_RS16895	0.53	-1.0
3,710,697	+		LRK53_RS16895	0.53	+1.0
3,710,697	+		LRK53_RS16895	0.53	-0.5
3,710,698	-		LRK53_RS16895	0.53	-1.3
3,710,698	-		LRK53_RS16895	0.53	-0.8
3,710,698	-		LRK53_RS16895	0.53	-2.5
3,710,698	-		LRK53_RS16895	0.53	-0.8
3,710,698	-		LRK53_RS16895	0.53	-0.6
3,710,698	-		LRK53_RS16895	0.53	-1.0
3,710,698	-		LRK53_RS16895	0.53	+2.6
3,710,698	-		LRK53_RS16895	0.53	+0.6
3,710,698	-		LRK53_RS16895	0.53	+1.0
3,710,698	-		LRK53_RS16895	0.53	-1.3
3,710,698	-		LRK53_RS16895	0.53	-2.8
3,710,698	-		LRK53_RS16895	0.53	-0.9
3,710,698	-		LRK53_RS16895	0.53	-1.2
3,710,698	-		LRK53_RS16895	0.53	-0.1
3,710,698	-		LRK53_RS16895	0.53	-0.6
3,710,883	+				+1.0
3,710,883	+				-1.5
3,710,883	+				+2.0
3,710,883	+				+0.6
3,710,883	+				+0.6
3,710,883	+				-0.8
3,710,883	+				-1.0
3,710,883	+				-0.8
3,710,883	+				-0.8
3,710,883	+				-0.9
3,710,883	+				-0.6
3,710,883	+				-0.0
3,710,883	+				-0.6
3,710,883	+				+1.0
3,710,883	+				-2.5
3,710,883	+				-0.3
3,710,883	+				-0.8
3,710,883	+				+0.4
3,710,883	+				-1.5
3,710,883	+				-0.0
3,710,883	+				-1.5
3,710,883	+				-0.6
3,710,883	+				-1.0
3,710,884	-				-1.0
3,710,884	-				-1.0
3,710,884	-				+1.0
3,710,884	-				+0.4
3,710,884	-				-0.6
3,710,884	-				+0.2
3,710,884	-				-0.6
3,710,884	-				-0.0
3,710,884	-				-0.6
3,710,884	-				+1.0
3,710,884	-				-0.6
3,710,884	-				-2.2
3,710,884	-				-0.6
3,710,884	-				-0.5
3,710,884	-				-0.6
3,710,884	-				-1.3
3,710,884	-				-2.3
3,710,884	-				+1.6
3,710,884	-				-1.5
3,710,884	-				-0.6
3,710,884	-				-0.0
3,710,884	-				-1.2
3,710,884	-				-0.2
3,710,884	-				-1.6
3,710,884	-				-1.0
3,710,884	-				+1.0
3,710,884	-				-0.0
3,710,884	-				-1.0
3,710,884	-				+3.0
3,710,884	-				-0.8
3,710,884	-				-3.5
3,710,884	-				-1.0
3,710,884	-				-2.0
3,710,884	-				-2.2
3,710,987	-				-0.0
3,711,172	+		LRK53_RS16900	0.36	-0.9
3,711,172	+		LRK53_RS16900	0.36	-1.1
3,711,172	+		LRK53_RS16900	0.36	-0.6
3,711,172	+		LRK53_RS16900	0.36	-0.6
3,711,172	+		LRK53_RS16900	0.36	-1.0
3,711,202	+		LRK53_RS16900	0.41	-2.7
3,711,202	+		LRK53_RS16900	0.41	-2.5
3,711,202	+		LRK53_RS16900	0.41	+0.4
3,711,202	+		LRK53_RS16900	0.41	-1.7
3,711,203	-		LRK53_RS16900	0.41	-0.6
3,711,203	-		LRK53_RS16900	0.41	-1.2
3,711,203	-		LRK53_RS16900	0.41	-1.6
3,711,203	-		LRK53_RS16900	0.41	-1.2
3,711,203	-		LRK53_RS16900	0.41	+0.4
3,711,654	+				-0.7
3,711,933	+		LRK53_RS16905	0.16	-1.0
3,711,933	+		LRK53_RS16905	0.16	-0.0
3,711,933	+		LRK53_RS16905	0.16	-0.0
3,711,933	+		LRK53_RS16905	0.16	-0.9
3,711,933	+		LRK53_RS16905	0.16	+2.0
3,711,933	+		LRK53_RS16905	0.16	-0.0
3,711,933	+		LRK53_RS16905	0.16	-0.0
3,711,934	-		LRK53_RS16905	0.16	-0.0
3,711,934	-		LRK53_RS16905	0.16	-0.6
3,711,934	-		LRK53_RS16905	0.16	-0.6
3,711,934	-		LRK53_RS16905	0.16	-1.0
3,711,934	-		LRK53_RS16905	0.16	-0.6
3,711,934	-		LRK53_RS16905	0.16	-0.1
3,711,934	-		LRK53_RS16905	0.16	-0.2
3,711,934	-		LRK53_RS16905	0.16	+0.4
3,711,978	+		LRK53_RS16905	0.18	+0.7
3,711,978	+		LRK53_RS16905	0.18	-0.2
3,711,978	+		LRK53_RS16905	0.18	-0.6
3,711,978	+		LRK53_RS16905	0.18	-1.0
3,711,978	+		LRK53_RS16905	0.18	-0.0
3,711,978	+		LRK53_RS16905	0.18	-0.0
3,711,978	+		LRK53_RS16905	0.18	-0.6
3,711,978	+		LRK53_RS16905	0.18	+1.0
3,711,979	-		LRK53_RS16905	0.18	+0.2
3,711,979	-		LRK53_RS16905	0.18	-1.3
3,712,134	+		LRK53_RS16905	0.26	-0.2
3,712,135	-		LRK53_RS16905	0.26	-0.0
3,712,227	+		LRK53_RS16905	0.31	+0.3
3,712,227	+		LRK53_RS16905	0.31	+1.0
3,712,227	+		LRK53_RS16905	0.31	-1.0
3,712,228	-		LRK53_RS16905	0.31	-1.8
3,712,228	-		LRK53_RS16905	0.31	-1.6
3,712,363	+		LRK53_RS16905	0.38	+0.4
3,712,363	+		LRK53_RS16905	0.38	+2.0
3,712,363	+		LRK53_RS16905	0.38	-1.3
3,712,363	+		LRK53_RS16905	0.38	-0.6
3,712,363	+		LRK53_RS16905	0.38	-0.0
3,712,364	-		LRK53_RS16905	0.38	-0.9
3,712,364	-		LRK53_RS16905	0.38	-0.6
3,712,364	-		LRK53_RS16905	0.38	-1.0
3,712,364	-		LRK53_RS16905	0.38	-0.3
3,712,364	-		LRK53_RS16905	0.38	+0.4
3,712,364	-		LRK53_RS16905	0.38	+0.4
3,712,364	-		LRK53_RS16905	0.38	-0.6
3,712,364	-		LRK53_RS16905	0.38	+0.1
3,712,364	-		LRK53_RS16905	0.38	-0.3
3,712,575	+		LRK53_RS16905	0.48	-0.6
3,712,576	-		LRK53_RS16905	0.48	-1.2