Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16635

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,660,429	+		LRK53_RS16620	0.37	-1.0
3,660,429	+		LRK53_RS16620	0.37	-0.2
3,660,450	+		LRK53_RS16620	0.42	-0.3
3,660,450	+		LRK53_RS16620	0.42	-2.3
3,660,450	+		LRK53_RS16620	0.42	-1.3
3,660,450	+		LRK53_RS16620	0.42	-0.6
3,660,451	-		LRK53_RS16620	0.43	-1.0
3,660,451	-		LRK53_RS16620	0.43	-1.5
3,660,451	-		LRK53_RS16620	0.43	-0.3
3,660,451	-		LRK53_RS16620	0.43	-2.2
3,660,451	-		LRK53_RS16620	0.43	+1.0
3,660,451	-		LRK53_RS16620	0.43	+0.3
3,660,451	-		LRK53_RS16620	0.43	-0.6
3,660,526	+		LRK53_RS16620	0.62	+1.4
3,660,526	+		LRK53_RS16620	0.62	-0.2
3,660,526	+		LRK53_RS16620	0.62	+1.4
3,660,526	+		LRK53_RS16620	0.62	+0.0
3,660,526	+		LRK53_RS16620	0.62	-2.2
3,660,526	+		LRK53_RS16620	0.62	-0.5
3,660,526	+		LRK53_RS16620	0.62	-1.0
3,660,526	+		LRK53_RS16620	0.62	+2.0
3,660,527	-		LRK53_RS16620	0.62	+1.0
3,660,527	-		LRK53_RS16620	0.62	-1.0
3,660,527	-		LRK53_RS16620	0.62	+0.0
3,660,527	-		LRK53_RS16620	0.62	-0.6
3,660,527	-		LRK53_RS16620	0.62	-1.0
3,660,527	-		LRK53_RS16620	0.62	-1.6
3,660,527	-		LRK53_RS16620	0.62	-3.0
3,660,527	-		LRK53_RS16620	0.62	+0.4
3,660,527	-		LRK53_RS16620	0.62	-2.9
3,660,527	-		LRK53_RS16620	0.62	-0.6
3,660,527	-		LRK53_RS16620	0.62	+0.3
3,660,527	-		LRK53_RS16620	0.62	-0.4
3,660,527	-		LRK53_RS16620	0.62	-1.2
3,660,641	+				-0.6
3,660,641	+				-0.6
3,660,642	-				-0.6
3,660,642	-				+0.0
3,660,642	-				-1.3
3,660,642	-				-1.3
3,660,642	-				-0.2
3,660,642	-				-0.6
3,660,642	-				-0.6
3,660,642	-				-1.0
3,660,642	-				-1.4
3,660,642	-				+1.0
3,660,702	+				+0.4
3,660,703	-				-1.7
3,660,703	-				-1.3
3,660,703	-				-2.0
3,660,703	-				+0.8
3,660,703	-				-1.3
3,660,703	-				+1.2
3,660,730	+				-0.2
3,660,730	+				-2.7
3,660,730	+				-1.6
3,660,730	+				+0.3
3,660,730	+				+1.0
3,660,730	+				+0.0
3,660,730	+				-1.5
3,660,731	-				+0.0
3,660,731	-				-1.8
3,660,731	-				-1.6
3,660,731	-				+0.0
3,660,731	-				-0.3
3,660,731	-				-0.6
3,660,731	-				-1.0
3,660,731	-				-1.0
3,660,793	+				-1.5
3,660,793	+				-1.6
3,660,793	+				-0.6
3,660,793	+				-1.0
3,660,793	+				-0.6
3,660,793	+				+1.0
3,660,793	+				-0.8
3,660,793	+				-2.2
3,660,793	+				+0.4
3,660,793	+				+0.0
3,660,793	+				-0.2
3,660,794	-				+1.0
3,660,794	-				-1.0
3,660,794	-				-1.3
3,660,794	-				+0.0
3,660,794	-				+1.1
3,660,794	-				+1.0
3,660,794	-				-0.8
3,660,794	-				-1.8
3,660,794	-				+0.0
3,660,794	-				-0.3
3,660,811	+				-0.8
3,660,811	+				-0.9
3,660,811	+				-1.3
3,660,811	+				-1.5
3,660,811	+				+2.0
3,660,812	-				+0.0
3,660,812	-				+1.6
3,660,873	+		LRK53_RS16625	0.26	-1.3
3,660,874	-		LRK53_RS16625	0.26	+1.6
3,660,874	-		LRK53_RS16625	0.26	+0.4
3,660,915	-		LRK53_RS16625	0.39	+0.0
3,660,998	+		LRK53_RS16625	0.64	-1.1
3,660,998	+		LRK53_RS16625	0.64	+2.0
3,660,998	+		LRK53_RS16625	0.64	+0.0
3,660,998	+		LRK53_RS16625	0.64	-1.6
3,660,998	+		LRK53_RS16625	0.64	-1.6
3,660,999	-		LRK53_RS16625	0.64	-0.6
3,660,999	-		LRK53_RS16625	0.64	-0.2
3,660,999	-		LRK53_RS16625	0.64	-1.0
3,660,999	-		LRK53_RS16625	0.64	-1.0
3,660,999	-		LRK53_RS16625	0.64	-0.3
3,660,999	-		LRK53_RS16625	0.64	-1.9
3,660,999	-		LRK53_RS16625	0.64	-0.2
3,660,999	-		LRK53_RS16625	0.64	-1.3
3,660,999	-		LRK53_RS16625	0.64	-1.2
3,660,999	-		LRK53_RS16625	0.64	-0.2
3,660,999	-		LRK53_RS16625	0.64	-2.2
3,660,999	-		LRK53_RS16625	0.64	+0.4
3,660,999	-		LRK53_RS16625	0.64	-1.3
3,661,155	+				-0.3
3,661,156	-				+1.0
3,661,156	-				+0.0
3,661,156	-				-1.3
3,661,174	+				+1.3
3,661,174	+				+1.4
3,661,174	+				+0.0
3,661,174	+				-1.3
3,661,174	+				+0.5
3,661,175	-				-0.7
3,661,175	-				-1.7
3,661,175	-				+0.0
3,661,175	-				-0.6
3,661,175	-				-0.3
3,661,207	+				+0.0
3,661,207	+				+0.1
3,661,207	+				+0.0
3,661,207	+				-1.3
3,661,207	+				+0.6
3,661,207	+				+2.6
3,661,207	+				-1.0
3,661,207	+				+0.0
3,661,208	-				-0.8
3,661,208	-				-0.6
3,661,208	-				-1.2
3,661,213	+				-1.1
3,661,213	+				-3.3
3,661,213	+				-2.1
3,661,214	-				-1.3
3,661,214	-				-1.2
3,661,214	-				-0.6
3,661,224	+				+0.0
3,661,224	+				+0.0
3,661,224	+				+0.0
3,661,224	+				+0.0
3,661,224	+				-0.3
3,661,224	+				+0.4
3,661,224	+				-0.9
3,661,224	+				-0.6
3,661,224	+				+0.4
3,661,224	+				-2.3
3,661,224	+				-2.2
3,661,224	+				-1.0
3,661,224	+				+0.2
3,661,224	+				-2.1
3,661,224	+				-1.6
3,661,224	+				-0.8
3,661,224	+				+1.6
3,661,224	+				-0.6
3,661,224	+				-2.2
3,661,224	+				-1.1
3,661,224	+				+0.4
3,661,224	+				+0.4
3,661,224	+				-0.6
3,661,224	+				-0.6
3,661,224	+				-0.8
3,661,225	-				+0.1
3,661,225	-				+1.0
3,661,225	-				+0.0
3,661,225	-				-0.8
3,661,225	-				+1.4
3,661,225	-				-1.2
3,661,225	-				-0.9
3,661,225	-				-1.0
3,661,225	-				+0.0
3,661,225	-				+1.0
3,661,225	-				-1.0
3,661,225	-				+0.2
3,661,226	+				-0.7
3,661,226	+				-0.7
3,661,226	+				+1.0
3,661,227	-				-1.0
3,661,227	-				+0.0
3,661,227	-				-1.0
3,661,227	-				+0.4
3,661,227	-				-0.2
3,661,227	-				-0.3
3,661,227	-				-1.1
3,661,307	+		LRK53_RS16630	0.50	-2.0
3,661,308	-		LRK53_RS16630	0.50	+0.4
3,661,308	-		LRK53_RS16630	0.50	-0.4
3,661,308	-		LRK53_RS16630	0.50	-1.0
3,661,522	-		LRK53_RS16635	0.36	-1.4
3,661,522	-		LRK53_RS16635	0.36	-0.6
3,661,522	-		LRK53_RS16635	0.36	-1.2
3,661,982	+		LRK53_RS16640	0.63	+0.8
3,661,982	+		LRK53_RS16640	0.63	-0.6
3,661,982	+		LRK53_RS16640	0.63	+0.7
3,662,251	+				+0.6
3,662,251	+				-0.6
3,662,251	+				-2.3
3,662,251	+				+0.0
3,662,252	-				+0.2
3,662,252	-				-1.1
3,662,252	-				-1.6
3,662,252	-				+0.4
3,662,322	+				-0.3
3,662,322	+				-1.6
3,662,322	+				+2.0
3,662,322	+				+0.0
3,662,322	+				-0.3
3,662,322	+				+0.0
3,662,322	+				-0.5
3,662,322	+				-1.5
3,662,323	-				+1.0
3,662,323	-				-1.3
3,662,323	-				-1.1
3,662,323	-				+0.0
3,662,323	-				+0.5
3,662,323	-				+1.0
3,662,323	-				+0.0
3,662,323	-				+0.0
3,662,533	+		LRK53_RS16645	0.32	-0.2
3,662,533	+		LRK53_RS16645	0.32	+0.0
3,662,533	+		LRK53_RS16645	0.32	+0.0
3,662,561	+		LRK53_RS16645	0.38	-0.7
3,662,561	+		LRK53_RS16645	0.38	+0.4
3,662,561	+		LRK53_RS16645	0.38	+0.0
3,662,561	+		LRK53_RS16645	0.38	+0.4
3,662,561	+		LRK53_RS16645	0.38	-1.6
3,662,561	+		LRK53_RS16645	0.38	+1.0
3,662,562	-		LRK53_RS16645	0.39	-0.1
3,662,562	-		LRK53_RS16645	0.39	-2.9
3,662,562	-		LRK53_RS16645	0.39	-0.6
3,662,562	-		LRK53_RS16645	0.39	-1.3
3,662,562	-		LRK53_RS16645	0.39	-0.3
3,662,562	-		LRK53_RS16645	0.39	-0.9
3,662,562	-		LRK53_RS16645	0.39	-0.4
3,662,562	-		LRK53_RS16645	0.39	-0.1
3,662,562	-		LRK53_RS16645	0.39	-0.4
3,662,562	-		LRK53_RS16645	0.39	-1.1
3,662,562	-		LRK53_RS16645	0.39	-0.3
3,662,562	-		LRK53_RS16645	0.39	-0.4
3,662,562	-		LRK53_RS16645	0.39	-1.0
3,662,562	-		LRK53_RS16645	0.39	-3.0
3,662,562	-		LRK53_RS16645	0.39	-0.2
3,662,562	-		LRK53_RS16645	0.39	+0.1
3,662,562	-		LRK53_RS16645	0.39	-0.2
3,662,708	+		LRK53_RS16645	0.71	+1.0
3,662,708	+		LRK53_RS16645	0.71	-0.4
3,662,708	+		LRK53_RS16645	0.71	-1.0
3,662,708	+		LRK53_RS16645	0.71	+0.0
3,662,708	+		LRK53_RS16645	0.71	-1.8
3,662,708	+		LRK53_RS16645	0.71	-1.0
3,662,708	+		LRK53_RS16645	0.71	-0.4
3,662,708	+		LRK53_RS16645	0.71	-0.6
3,662,708	+		LRK53_RS16645	0.71	-1.4
3,662,709	-		LRK53_RS16645	0.71	-0.8
3,662,709	-		LRK53_RS16645	0.71	-0.5
3,662,709	-		LRK53_RS16645	0.71	+0.0
3,662,709	-		LRK53_RS16645	0.71	-0.4
3,662,709	-		LRK53_RS16645	0.71	+0.0
3,662,709	-		LRK53_RS16645	0.71	-1.2
3,662,709	-		LRK53_RS16645	0.71	-0.7
3,662,709	-		LRK53_RS16645	0.71	-1.2
3,662,709	-		LRK53_RS16645	0.71	+0.0
3,662,709	-		LRK53_RS16645	0.71	-1.0
3,662,709	-		LRK53_RS16645	0.71	+1.0