Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16520

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,638,308	+		LRK53_RS16515	0.24	-1.7
3,638,308	+		LRK53_RS16515	0.24	+1.0
3,638,308	+		LRK53_RS16515	0.24	+0.4
3,638,308	+		LRK53_RS16515	0.24	-1.5
3,638,308	+		LRK53_RS16515	0.24	-0.4
3,638,308	+		LRK53_RS16515	0.24	+0.0
3,638,308	+		LRK53_RS16515	0.24	-0.6
3,638,308	+		LRK53_RS16515	0.24	-0.5
3,638,308	+		LRK53_RS16515	0.24	-0.1
3,638,308	+		LRK53_RS16515	0.24	+0.4
3,638,308	+		LRK53_RS16515	0.24	-1.2
3,638,309	-		LRK53_RS16515	0.24	+1.0
3,638,309	-		LRK53_RS16515	0.24	-0.2
3,638,309	-		LRK53_RS16515	0.24	-1.4
3,638,309	-		LRK53_RS16515	0.24	+2.0
3,638,309	-		LRK53_RS16515	0.24	+1.0
3,638,309	-		LRK53_RS16515	0.24	+1.0
3,638,309	-		LRK53_RS16515	0.24	+0.2
3,638,374	+		LRK53_RS16515	0.31	-0.6
3,638,374	+		LRK53_RS16515	0.31	-1.1
3,638,374	+		LRK53_RS16515	0.31	+0.0
3,638,374	+		LRK53_RS16515	0.31	-1.8
3,638,375	-		LRK53_RS16515	0.31	+0.4
3,638,375	-		LRK53_RS16515	0.31	+0.0
3,638,375	-		LRK53_RS16515	0.31	+0.5
3,638,375	-		LRK53_RS16515	0.31	-1.0
3,638,393	-		LRK53_RS16515	0.33	-1.8
3,638,470	+		LRK53_RS16515	0.42	-0.3
3,638,471	-		LRK53_RS16515	0.42	+0.0
3,638,575	+		LRK53_RS16515	0.53	-0.3
3,638,575	+		LRK53_RS16515	0.53	+0.0
3,638,575	+		LRK53_RS16515	0.53	-0.6
3,638,575	+		LRK53_RS16515	0.53	-0.8
3,638,575	+		LRK53_RS16515	0.53	+1.7
3,638,575	+		LRK53_RS16515	0.53	+1.7
3,638,575	+		LRK53_RS16515	0.53	+0.4
3,638,575	+		LRK53_RS16515	0.53	-0.6
3,638,575	+		LRK53_RS16515	0.53	-0.7
3,638,576	-		LRK53_RS16515	0.53	-2.2
3,638,576	-		LRK53_RS16515	0.53	+0.4
3,638,576	-		LRK53_RS16515	0.53	-1.8
3,638,576	-		LRK53_RS16515	0.53	+1.0
3,638,576	-		LRK53_RS16515	0.53	-0.3
3,638,576	-		LRK53_RS16515	0.53	+0.0
3,638,576	-		LRK53_RS16515	0.53	-0.6
3,638,576	-		LRK53_RS16515	0.53	-0.2
3,638,576	-		LRK53_RS16515	0.53	-1.1
3,638,576	-		LRK53_RS16515	0.53	+0.0
3,638,576	-		LRK53_RS16515	0.53	-1.0
3,638,576	-		LRK53_RS16515	0.53	-1.3
3,638,576	-		LRK53_RS16515	0.53	-1.2
3,638,576	-		LRK53_RS16515	0.53	+2.0
3,638,576	-		LRK53_RS16515	0.53	+0.0
3,638,576	-		LRK53_RS16515	0.53	-1.0
3,638,817	+		LRK53_RS16515	0.79	+0.6
3,638,818	+		LRK53_RS16515	0.79	-1.1
3,638,818	+		LRK53_RS16515	0.79	-3.0
3,638,818	+		LRK53_RS16515	0.79	-1.0
3,638,818	+		LRK53_RS16515	0.79	-1.3
3,638,818	+		LRK53_RS16515	0.79	-0.3
3,638,818	+		LRK53_RS16515	0.79	-1.8
3,638,818	+		LRK53_RS16515	0.79	+2.0
3,638,818	+		LRK53_RS16515	0.79	+0.8
3,638,818	+		LRK53_RS16515	0.79	-0.8
3,638,818	+		LRK53_RS16515	0.79	+0.0
3,638,818	+		LRK53_RS16515	0.79	+0.0
3,638,818	+		LRK53_RS16515	0.79	+0.6
3,638,819	-		LRK53_RS16515	0.80	-1.0
3,638,819	-		LRK53_RS16515	0.80	-1.7
3,638,819	-		LRK53_RS16515	0.80	+1.0
3,638,819	-		LRK53_RS16515	0.80	-1.3
3,638,819	-		LRK53_RS16515	0.80	-1.2
3,638,819	-		LRK53_RS16515	0.80	+0.0
3,638,819	-		LRK53_RS16515	0.80	-1.3
3,638,819	-		LRK53_RS16515	0.80	-0.8
3,638,819	-		LRK53_RS16515	0.80	-0.8
3,638,822	+		LRK53_RS16515	0.80	-1.0
3,638,824	+		LRK53_RS16515	0.80	-1.5
3,638,824	+		LRK53_RS16515	0.80	-2.0
3,638,824	+		LRK53_RS16515	0.80	+0.3
3,638,824	+		LRK53_RS16515	0.80	-0.9
3,638,825	-		LRK53_RS16515	0.80	-0.7
3,638,825	-		LRK53_RS16515	0.80	-0.8
3,638,825	-		LRK53_RS16515	0.80	-1.2
3,638,825	-		LRK53_RS16515	0.80	+0.0
3,638,825	-		LRK53_RS16515	0.80	-0.6
3,638,825	-		LRK53_RS16515	0.80	-1.0
3,639,102	+				+0.0
3,639,102	+				-0.5
3,639,102	+				-1.1
3,639,103	-				+0.3
3,639,103	-				-2.9
3,639,103	-				-0.8
3,639,159	+				-3.2
3,639,159	+				+1.0
3,639,159	+				-0.2
3,639,159	+				-0.6
3,639,159	+				-1.2
3,639,160	-				-0.6
3,639,160	-				+0.6
3,639,160	-				-1.6
3,639,160	-				-0.6
3,639,160	-				-0.6
3,639,160	-				-0.8
3,639,160	-				-0.9
3,639,160	-				-2.7
3,639,160	-				+2.0
3,639,160	-				-1.3
3,639,160	-				+1.2
3,639,160	-				-1.0
3,639,558	-		LRK53_RS16520	0.20	+0.0
3,639,766	+		LRK53_RS16520	0.36	+0.0
3,639,766	+		LRK53_RS16520	0.36	-2.2
3,639,766	+		LRK53_RS16520	0.36	+1.0
3,639,767	-		LRK53_RS16520	0.36	+0.6
3,640,215	-		LRK53_RS16520	0.71	-1.0
3,640,215	-		LRK53_RS16520	0.71	-0.6
3,640,215	-		LRK53_RS16520	0.71	-0.7
3,640,262	+		LRK53_RS16520	0.75	-1.4
3,640,263	-		LRK53_RS16520	0.75	-1.0
3,640,263	-		LRK53_RS16520	0.75	+0.0
3,640,346	+		LRK53_RS16520	0.81	-2.2
3,640,347	-		LRK53_RS16520	0.81	+1.0
3,640,347	-		LRK53_RS16520	0.81	+1.0
3,640,347	-		LRK53_RS16520	0.81	-1.0
3,640,347	-		LRK53_RS16520	0.81	+1.0
3,640,347	-		LRK53_RS16520	0.81	+0.0
3,640,347	-		LRK53_RS16520	0.81	-1.8
3,640,347	-		LRK53_RS16520	0.81	-1.0
3,640,347	-		LRK53_RS16520	0.81	-0.4
3,640,347	-		LRK53_RS16520	0.81	-0.6
3,640,347	-		LRK53_RS16520	0.81	+0.0
3,640,347	-		LRK53_RS16520	0.81	-1.0
3,640,347	-		LRK53_RS16520	0.81	-1.3
3,640,347	-		LRK53_RS16520	0.81	-0.8
3,640,347	-		LRK53_RS16520	0.81	+1.0
3,640,347	-		LRK53_RS16520	0.81	+0.0
3,640,347	-		LRK53_RS16520	0.81	-0.4
3,640,572	+				+1.0
3,640,573	-				-1.0
3,640,573	-				+1.0
3,640,573	-				-0.6
3,640,573	-				-1.0
3,640,573	-				+2.0
3,641,306	+				+0.7
3,641,306	+				-0.1
3,641,306	+				+2.0
3,641,306	+				-0.3
3,641,307	-				+1.0
3,641,307	-				-1.0
3,641,307	-				-1.5
3,641,422	+				-0.2
3,641,422	+				+1.6
3,641,422	+				-1.8
3,641,422	+				-0.0
3,641,422	+				-1.0
3,641,422	+				-0.2
3,641,422	+				-1.8
3,641,422	+				-0.0
3,641,422	+				+1.0
3,641,422	+				+0.4
3,641,422	+				-1.2
3,641,422	+				+1.0
3,641,423	-				+0.5
3,641,423	-				-0.0
3,641,423	-				-0.7
3,641,423	-				-1.0
3,641,423	-				+0.5
3,641,423	-				+1.0
3,641,423	-				+0.2
3,641,423	-				+2.0
3,641,423	-				-0.9
3,641,423	-				-1.0
3,641,423	-				+1.0
3,641,423	-				-0.5
3,641,433	+				-1.3
3,641,494	+				-1.0
3,641,494	+				+0.4
3,641,494	+				+1.0
3,641,494	+				-1.6
3,641,494	+				-0.0
3,641,494	+				-2.3
3,641,495	-				-0.8
3,641,496	+				+1.0
3,641,496	+				-0.2
3,641,496	+				+1.0
3,641,497	-				+2.0
3,641,497	-				-0.6
3,641,497	-				+2.0
3,641,497	-				-1.0
3,641,512	-				+2.0
3,641,512	-				+0.5