Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16335

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,595,594	+				-0.0
3,595,594	+				-0.5
3,595,594	+				-0.4
3,595,594	+				-1.8
3,595,594	+				-1.8
3,595,594	+				-0.0
3,595,594	+				-0.8
3,595,594	+				+1.0
3,595,594	+				+0.4
3,595,594	+				-0.7
3,595,594	+				-0.0
3,595,594	+				-1.2
3,595,594	+				+0.2
3,595,594	+				-0.9
3,595,594	+				+2.0
3,595,594	+				-0.3
3,595,594	+				-1.2
3,595,594	+				-0.0
3,595,595	-				-0.9
3,595,595	-				-0.6
3,595,595	-				-0.4
3,595,595	-				-0.5
3,595,595	-				-0.6
3,595,595	-				-3.1
3,595,595	-				-0.6
3,595,595	-				+2.0
3,595,595	-				+0.7
3,595,595	-				+1.0
3,595,595	-				+0.4
3,595,595	-				-0.3
3,595,595	-				-0.9
3,595,595	-				-1.0
3,595,595	-				-0.9
3,595,595	-				-1.8
3,596,070	+		LRK53_RS16330	0.50	+1.6
3,596,070	+		LRK53_RS16330	0.50	-2.2
3,596,070	+		LRK53_RS16330	0.50	-2.8
3,596,070	+		LRK53_RS16330	0.50	-1.3
3,596,070	+		LRK53_RS16330	0.50	-2.2
3,596,070	+		LRK53_RS16330	0.50	-0.0
3,596,070	+		LRK53_RS16330	0.50	+0.4
3,596,070	+		LRK53_RS16330	0.50	-1.0
3,596,070	+		LRK53_RS16330	0.50	-1.0
3,596,070	+		LRK53_RS16330	0.50	-1.8
3,596,070	+		LRK53_RS16330	0.50	-0.6
3,596,070	+		LRK53_RS16330	0.50	+1.0
3,596,071	-		LRK53_RS16330	0.50	-1.0
3,596,071	-		LRK53_RS16330	0.50	-0.8
3,596,071	-		LRK53_RS16330	0.50	-3.3
3,596,071	-		LRK53_RS16330	0.50	-4.3
3,596,071	-		LRK53_RS16330	0.50	-2.1
3,596,071	-		LRK53_RS16330	0.50	-1.0
3,596,071	-		LRK53_RS16330	0.50	-1.9
3,596,071	-		LRK53_RS16330	0.50	-0.0
3,596,071	-		LRK53_RS16330	0.50	-2.0
3,596,071	-		LRK53_RS16330	0.50	-3.1
3,596,071	-		LRK53_RS16330	0.50	+0.3
3,596,071	-		LRK53_RS16330	0.50	-0.0
3,596,071	-		LRK53_RS16330	0.50	-3.0
3,596,071	-		LRK53_RS16330	0.50	-1.5
3,596,071	-		LRK53_RS16330	0.50	-3.9
3,596,071	-		LRK53_RS16330	0.50	-2.7
3,596,071	-		LRK53_RS16330	0.50	+0.4
3,596,127	+		LRK53_RS16330	0.59	+1.0
3,596,128	-		LRK53_RS16330	0.59	-2.2
3,596,128	-		LRK53_RS16330	0.59	-2.6
3,596,325	+				-0.4
3,596,325	+				-1.3
3,596,325	+				-0.0
3,596,326	-				-1.0
3,596,486	+				-1.6
3,596,487	-				-1.0
3,596,487	-				-2.8
3,596,487	-				-1.3
3,596,487	-				-1.9
3,596,487	-				+1.0
3,596,487	-				-1.6
3,596,487	-				-1.6
3,596,487	-				-3.1
3,596,687	+		LRK53_RS16335	0.26	-1.3
3,596,687	+		LRK53_RS16335	0.26	-0.7
3,596,687	+		LRK53_RS16335	0.26	-0.6
3,596,687	+		LRK53_RS16335	0.26	-2.5
3,596,687	+		LRK53_RS16335	0.26	-1.8
3,596,688	-		LRK53_RS16335	0.26	-2.3
3,596,688	-		LRK53_RS16335	0.26	-1.6
3,596,688	-		LRK53_RS16335	0.26	-2.8
3,596,688	-		LRK53_RS16335	0.26	-0.6
3,596,688	-		LRK53_RS16335	0.26	-1.6
3,596,688	-		LRK53_RS16335	0.26	-2.9
3,596,688	-		LRK53_RS16335	0.26	-4.5
3,596,826	+		LRK53_RS16335	0.39	-0.6
3,596,826	+		LRK53_RS16335	0.39	-2.7
3,596,826	+		LRK53_RS16335	0.39	-0.6
3,596,826	+		LRK53_RS16335	0.39	-2.0
3,596,827	-		LRK53_RS16335	0.39	-2.6
3,596,827	-		LRK53_RS16335	0.39	+1.0
3,596,827	-		LRK53_RS16335	0.39	-1.6
3,596,827	-		LRK53_RS16335	0.39	-1.3
3,596,827	-		LRK53_RS16335	0.39	+1.0
3,596,827	-		LRK53_RS16335	0.39	-0.6
3,597,029	+		LRK53_RS16335	0.58	-2.0
3,597,063	+		LRK53_RS16335	0.61	-2.8
3,597,518	-				-1.8
3,597,802	+		LRK53_RS16340	0.40	-0.0
3,597,802	+		LRK53_RS16340	0.40	-0.6
3,597,803	-		LRK53_RS16340	0.40	-0.6
3,597,821	+		LRK53_RS16340	0.43	+1.0
3,597,821	+		LRK53_RS16340	0.43	-1.1
3,597,821	+		LRK53_RS16340	0.43	-0.8
3,597,821	+		LRK53_RS16340	0.43	+0.3
3,597,821	+		LRK53_RS16340	0.43	-0.0
3,597,822	-		LRK53_RS16340	0.43	-1.3
3,597,822	-		LRK53_RS16340	0.43	-1.3
3,597,875	+		LRK53_RS16340	0.52	+0.4
3,597,935	+		LRK53_RS16340	0.61	-0.0
3,597,935	+		LRK53_RS16340	0.61	-1.8
3,597,935	+		LRK53_RS16340	0.61	-2.0
3,597,935	+		LRK53_RS16340	0.61	-0.6
3,597,935	+		LRK53_RS16340	0.61	-1.3
3,597,935	+		LRK53_RS16340	0.61	-1.8
3,597,935	+		LRK53_RS16340	0.61	-1.8
3,597,935	+		LRK53_RS16340	0.61	-0.9
3,597,935	+		LRK53_RS16340	0.61	-0.3
3,597,935	+		LRK53_RS16340	0.61	-1.8
3,597,936	-		LRK53_RS16340	0.61	-0.4
3,597,936	-		LRK53_RS16340	0.61	+0.6
3,597,936	-		LRK53_RS16340	0.61	-0.0
3,597,936	-		LRK53_RS16340	0.61	+0.4
3,597,936	-		LRK53_RS16340	0.61	+1.0
3,597,936	-		LRK53_RS16340	0.61	-0.0
3,597,936	-		LRK53_RS16340	0.61	+1.0
3,597,936	-		LRK53_RS16340	0.61	+2.6
3,597,936	-		LRK53_RS16340	0.61	-0.8
3,597,936	-		LRK53_RS16340	0.61	+0.6
3,597,936	-		LRK53_RS16340	0.61	-0.6
3,597,936	-		LRK53_RS16340	0.61	+0.7
3,597,936	-		LRK53_RS16340	0.61	-0.7
3,597,936	-		LRK53_RS16340	0.61	-1.5
3,597,937	+		LRK53_RS16340	0.61	-1.0
3,597,938	-		LRK53_RS16340	0.62	-1.0
3,597,938	-		LRK53_RS16340	0.62	-1.7
3,598,093	+		LRK53_RS16340	0.86	-1.6
3,598,119	-				-0.3
3,598,192	+				-1.0
3,598,192	+				+1.0
3,598,192	+				+0.4
3,598,193	-				+0.4
3,598,193	-				-1.3
3,598,193	-				-0.5
3,598,193	-				-0.0
3,598,193	-				-2.5
3,598,201	+				-0.6
3,598,333	-		LRK53_RS16345	0.46	+0.6
3,598,333	-		LRK53_RS16345	0.46	-1.6
3,598,333	-		LRK53_RS16345	0.46	-1.0