Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS16280 and LRK53_RS16285 are separated by 26 nucleotides LRK53_RS16285 and LRK53_RS16290 are separated by 42 nucleotides LRK53_RS16290 and LRK53_RS16300 are separated by 752 nucleotides
LRK53_RS16280: LRK53_RS16280 - cell division protein FtsL, at 3,586,267 to 3,586,506
_RS16280
LRK53_RS16285: LRK53_RS16285 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 3,586,533 to 3,587,459
_RS16285
LRK53_RS16290: LRK53_RS16290 - division/cell wall cluster transcriptional repressor MraZ, at 3,587,502 to 3,587,957
_RS16290
LRK53_RS16300: LRK53_RS16300 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 3,588,710 to 3,589,540
_RS16300
Position (kb)
3587
3588 Strain fitness (log2 ratio)
-2
-1
0
1 at 3587.504 kb on - strand at 3587.504 kb on - strand at 3587.504 kb on - strand at 3587.504 kb on - strand at 3587.798 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3588.650 kb on + strand at 3588.650 kb on + strand at 3588.650 kb on + strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM remove 3,587,504 - -0.0 3,587,504 - +0.6 3,587,504 - -0.0 3,587,504 - -1.4 3,587,798 - LRK53_RS16290 0.65 -0.3 3,587,837 - LRK53_RS16290 0.73 -1.6 3,587,837 - LRK53_RS16290 0.73 +0.7 3,587,837 - LRK53_RS16290 0.73 -0.5 3,587,837 - LRK53_RS16290 0.73 -1.8 3,587,837 - LRK53_RS16290 0.73 -0.6 3,587,837 - LRK53_RS16290 0.73 -0.6 3,587,837 - LRK53_RS16290 0.73 -1.3 3,587,837 - LRK53_RS16290 0.73 -0.6 3,588,650 + +1.6 3,588,650 + -1.0 3,588,650 + -0.0 3,588,651 - +0.4 3,588,651 - +1.0 3,588,651 - -0.0 3,588,651 - -1.0 3,588,651 - -0.8 3,588,651 - +1.0 3,588,651 - -0.3 3,588,651 - -1.9 3,588,651 - +0.4 3,588,651 - -0.0 3,588,651 - +0.4 3,588,651 - +0.4 3,588,651 - -0.0 3,588,651 - -0.6 3,588,651 - -0.9 3,588,651 - -0.3 3,588,721 - +1.0 3,588,721 - +0.6 3,588,721 - -0.5 3,588,721 - -0.0 3,588,721 - -0.8 3,588,721 - -1.3
Or see this region's nucleotide sequence