Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16035

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
3,520,863	+		LRK53_RS16025	0.69	-1.6
3,520,863	+		LRK53_RS16025	0.69	+1.0
3,520,863	+		LRK53_RS16025	0.69	-0.9
3,520,863	+		LRK53_RS16025	0.69	-1.0
3,520,863	+		LRK53_RS16025	0.69	-0.0
3,520,863	+		LRK53_RS16025	0.69	-0.6
3,520,863	+		LRK53_RS16025	0.69	+0.1
3,520,863	+		LRK53_RS16025	0.69	-2.3
3,520,863	+		LRK53_RS16025	0.69	-1.3
3,520,864	-		LRK53_RS16025	0.70	-0.9
3,520,864	-		LRK53_RS16025	0.70	-0.0
3,520,864	-		LRK53_RS16025	0.70	-0.0
3,520,864	-		LRK53_RS16025	0.70	-1.5
3,520,864	-		LRK53_RS16025	0.70	-0.5
3,520,911	+		LRK53_RS16025	0.77	-0.6
3,520,911	+		LRK53_RS16025	0.77	+0.6
3,520,911	+		LRK53_RS16025	0.77	-0.1
3,520,911	+		LRK53_RS16025	0.77	-0.8
3,520,911	+		LRK53_RS16025	0.77	-0.0
3,520,912	-		LRK53_RS16025	0.77	-0.0
3,520,912	-		LRK53_RS16025	0.77	-1.6
3,520,912	-		LRK53_RS16025	0.77	-0.1
3,520,912	-		LRK53_RS16025	0.77	-1.3
3,520,912	-		LRK53_RS16025	0.77	-0.6
3,520,912	-		LRK53_RS16025	0.77	-1.3
3,520,912	-		LRK53_RS16025	0.77	+0.4
3,520,912	-		LRK53_RS16025	0.77	-0.6
3,520,912	-		LRK53_RS16025	0.77	-0.4
3,520,912	-		LRK53_RS16025	0.77	-1.0
3,520,912	-		LRK53_RS16025	0.77	-0.0
3,520,990	-		LRK53_RS16025	0.89	+0.2
3,520,990	-		LRK53_RS16025	0.89	-1.6
3,520,990	-		LRK53_RS16025	0.89	+1.0
3,520,990	-		LRK53_RS16025	0.89	-0.8
3,520,991	+		LRK53_RS16025	0.89	-0.9
3,520,991	+		LRK53_RS16025	0.89	-0.0
3,520,991	+		LRK53_RS16025	0.89	-1.5
3,520,991	+		LRK53_RS16025	0.89	+1.0
3,520,991	+		LRK53_RS16025	0.89	-2.0
3,520,991	+		LRK53_RS16025	0.89	+0.4
3,520,991	+		LRK53_RS16025	0.89	-1.8
3,520,991	+		LRK53_RS16025	0.89	+0.6
3,520,991	+		LRK53_RS16025	0.89	-1.6
3,520,991	+		LRK53_RS16025	0.89	-1.5
3,520,991	+		LRK53_RS16025	0.89	-0.3
3,520,991	+		LRK53_RS16025	0.89	+2.0
3,520,991	+		LRK53_RS16025	0.89	-1.6
3,520,991	+		LRK53_RS16025	0.89	+0.5
3,520,991	+		LRK53_RS16025	0.89	-0.0
3,520,991	+		LRK53_RS16025	0.89	-0.0
3,520,991	+		LRK53_RS16025	0.89	-0.4
3,520,991	+		LRK53_RS16025	0.89	+0.2
3,520,991	+		LRK53_RS16025	0.89	+0.4
3,520,991	+		LRK53_RS16025	0.89	-1.3
3,520,991	+		LRK53_RS16025	0.89	-0.5
3,520,991	+		LRK53_RS16025	0.89	+2.0
3,520,991	+		LRK53_RS16025	0.89	-0.6
3,520,991	+		LRK53_RS16025	0.89	+0.4
3,520,991	+		LRK53_RS16025	0.89	-0.3
3,520,991	+		LRK53_RS16025	0.89	-0.0
3,520,991	+		LRK53_RS16025	0.89	-1.2
3,520,991	+		LRK53_RS16025	0.89	-1.8
3,520,991	+		LRK53_RS16025	0.89	-1.0
3,520,991	+		LRK53_RS16025	0.89	+1.0
3,520,991	+		LRK53_RS16025	0.89	-2.0
3,520,991	+		LRK53_RS16025	0.89	+1.3
3,520,991	+		LRK53_RS16025	0.89	-0.5
3,520,991	+		LRK53_RS16025	0.89	+1.4
3,520,991	+		LRK53_RS16025	0.89	-0.6
3,520,992	-		LRK53_RS16025	0.89	-1.3
3,520,992	-		LRK53_RS16025	0.89	-0.7
3,520,992	-		LRK53_RS16025	0.89	-2.7
3,520,992	-		LRK53_RS16025	0.89	+3.0
3,520,992	-		LRK53_RS16025	0.89	-0.0
3,520,992	-		LRK53_RS16025	0.89	-0.0
3,520,992	-		LRK53_RS16025	0.89	-0.2
3,520,992	-		LRK53_RS16025	0.89	-0.6
3,520,992	-		LRK53_RS16025	0.89	-1.3
3,520,992	-		LRK53_RS16025	0.89	-0.3
3,520,992	-		LRK53_RS16025	0.89	+0.7
3,520,992	-		LRK53_RS16025	0.89	-0.9
3,520,992	-		LRK53_RS16025	0.89	-0.4
3,520,992	-		LRK53_RS16025	0.89	-1.0
3,520,992	-		LRK53_RS16025	0.89	-0.0
3,520,992	-		LRK53_RS16025	0.89	+0.3
3,520,992	-		LRK53_RS16025	0.89	-0.6
3,520,992	-		LRK53_RS16025	0.89	-0.6
3,520,992	-		LRK53_RS16025	0.89	-1.8
3,520,992	-		LRK53_RS16025	0.89	-2.8
3,520,992	-		LRK53_RS16025	0.89	-0.4
3,520,992	-		LRK53_RS16025	0.89	-1.8
3,520,992	-		LRK53_RS16025	0.89	-0.7
3,520,992	-		LRK53_RS16025	0.89	-1.3
3,520,992	-		LRK53_RS16025	0.89	-3.3
3,520,992	-		LRK53_RS16025	0.89	-1.0
3,520,992	-		LRK53_RS16025	0.89	-0.5
3,520,992	-		LRK53_RS16025	0.89	+0.7
3,520,992	-		LRK53_RS16025	0.89	-0.7
3,520,992	-		LRK53_RS16025	0.89	-1.1
3,520,992	-		LRK53_RS16025	0.89	-0.7
3,520,992	-		LRK53_RS16025	0.89	-0.4
3,520,992	-		LRK53_RS16025	0.89	+2.0
3,521,120	+		LRK53_RS16030	0.23	-0.6
3,521,120	+		LRK53_RS16030	0.23	-1.3
3,521,126	+		LRK53_RS16030	0.24	-1.0
3,521,126	+		LRK53_RS16030	0.24	-1.3
3,521,126	+		LRK53_RS16030	0.24	+1.0
3,521,126	+		LRK53_RS16030	0.24	+0.3
3,521,126	+		LRK53_RS16030	0.24	-0.9
3,521,126	+		LRK53_RS16030	0.24	-2.5
3,521,126	+		LRK53_RS16030	0.24	+1.0
3,521,126	+		LRK53_RS16030	0.24	-1.9
3,521,126	+		LRK53_RS16030	0.24	-0.1
3,521,127	-		LRK53_RS16030	0.24	-0.2
3,521,127	-		LRK53_RS16030	0.24	-1.7
3,521,127	-		LRK53_RS16030	0.24	+1.0
3,521,127	-		LRK53_RS16030	0.24	-0.3
3,521,127	-		LRK53_RS16030	0.24	+0.1
3,521,127	-		LRK53_RS16030	0.24	-1.3
3,521,127	-		LRK53_RS16030	0.24	-0.8
3,521,127	-		LRK53_RS16030	0.24	-0.8
3,521,127	-		LRK53_RS16030	0.24	-1.3
3,521,127	-		LRK53_RS16030	0.24	+1.0
3,521,291	+		LRK53_RS16030	0.59	-2.0
3,521,291	+		LRK53_RS16030	0.59	-0.0
3,521,291	+		LRK53_RS16030	0.59	-3.3
3,521,291	+		LRK53_RS16030	0.59	-0.0
3,521,291	+		LRK53_RS16030	0.59	+1.0
3,521,291	+		LRK53_RS16030	0.59	-2.2
3,521,291	+		LRK53_RS16030	0.59	-0.6
3,521,291	+		LRK53_RS16030	0.59	-1.2
3,521,292	-		LRK53_RS16030	0.59	-0.3
3,521,292	-		LRK53_RS16030	0.59	+2.6
3,521,292	-		LRK53_RS16030	0.59	-1.0
3,521,345	+		LRK53_RS16030	0.71	-1.0
3,521,345	+		LRK53_RS16030	0.71	-1.3
3,521,345	+		LRK53_RS16030	0.71	-0.6
3,521,345	+		LRK53_RS16030	0.71	-1.8
3,521,346	-		LRK53_RS16030	0.71	-0.0
3,521,346	-		LRK53_RS16030	0.71	-0.0
3,521,346	-		LRK53_RS16030	0.71	-1.0
3,521,346	-		LRK53_RS16030	0.71	-1.7
3,521,387	+		LRK53_RS16030	0.80	-0.6
3,521,387	+		LRK53_RS16030	0.80	+1.6
3,521,387	+		LRK53_RS16030	0.80	-1.1
3,521,388	-		LRK53_RS16030	0.80	-0.0
3,521,388	-		LRK53_RS16030	0.80	+0.4
3,521,388	-		LRK53_RS16030	0.80	-1.8
3,521,388	-		LRK53_RS16030	0.80	-1.4
3,521,388	-		LRK53_RS16030	0.80	-1.3
3,521,388	-		LRK53_RS16030	0.80	-0.6
3,521,500	+				+2.0
3,521,501	-				-1.0
3,521,501	-				-0.1
3,521,686	+				-0.1
3,521,686	+				+2.0
3,521,686	+				-0.6
3,521,686	+				+2.0
3,521,686	+				-1.3
3,521,686	+				-0.0
3,521,686	+				-2.2
3,521,686	+				-1.0
3,521,686	+				-1.4
3,521,687	-				-0.6
3,521,687	-				-0.6
3,521,687	-				+1.3
3,521,798	-		LRK53_RS16035	0.16	-1.0
3,521,881	+		LRK53_RS16035	0.33	+2.0
3,521,881	+		LRK53_RS16035	0.33	+0.4
3,521,881	+		LRK53_RS16035	0.33	+0.4
3,521,881	+		LRK53_RS16035	0.33	-0.6
3,521,882	-		LRK53_RS16035	0.34	-1.3
3,521,882	-		LRK53_RS16035	0.34	-1.0
3,521,882	-		LRK53_RS16035	0.34	-0.2
3,521,882	-		LRK53_RS16035	0.34	-0.0
3,521,924	+		LRK53_RS16035	0.42	-0.0
3,521,924	+		LRK53_RS16035	0.42	-0.0
3,522,079	+		LRK53_RS16035	0.75	-2.3
3,522,080	-		LRK53_RS16035	0.75	+0.4
3,522,190	+				-0.3
3,522,190	+				-1.0
3,522,190	+				-0.6
3,522,190	+				-0.6
3,522,190	+				+1.6
3,522,190	+				-0.0
3,522,190	+				-0.3
3,522,190	+				-1.7
3,522,190	+				-0.6
3,522,190	+				-1.0
3,522,190	+				+1.0
3,522,190	+				-0.2
3,522,190	+				+2.3
3,522,190	+				-0.0
3,522,190	+				-1.6
3,522,190	+				-1.8
3,522,191	-				-1.7
3,522,191	-				-1.8
3,522,191	-				+2.0
3,522,191	-				-1.2
3,522,191	-				+1.0
3,522,191	-				-1.0
3,522,191	-				+0.2
3,522,191	-				-0.6
3,522,191	-				-0.0
3,522,191	-				-2.0
3,522,191	-				+0.7
3,522,191	-				+0.4
3,522,191	-				-0.6
3,522,191	-				+1.7
3,522,191	-				-0.0
3,522,196	+				-0.4
3,522,197	-				-1.0
3,522,197	-				+0.5
3,522,238	+				-0.8
3,522,238	+				-1.8
3,522,238	+				-1.4
3,522,238	+				-0.0
3,522,239	-				-1.3
3,522,239	-				-1.8
3,522,239	-				-1.3
3,522,239	-				-1.6
3,522,239	-				-0.1
3,522,281	+				+0.6
3,522,281	+				-0.1
3,522,281	+				-1.6
3,522,281	+				-2.2
3,522,281	+				-0.8
3,522,282	-				-0.0
3,522,431	-		LRK53_RS16040	0.11	-1.0
3,522,431	-		LRK53_RS16040	0.11	-0.6
3,522,533	-		LRK53_RS16040	0.17	-2.0
3,522,814	+		LRK53_RS16040	0.33	+1.0
3,522,814	+		LRK53_RS16040	0.33	+1.7
3,522,815	-		LRK53_RS16040	0.33	+2.0
3,522,815	-		LRK53_RS16040	0.33	-0.0
3,522,990	+		LRK53_RS16040	0.42	-1.3
3,522,990	+		LRK53_RS16040	0.42	-0.4
3,522,990	+		LRK53_RS16040	0.42	-2.6
3,522,990	+		LRK53_RS16040	0.42	-0.3
3,522,990	+		LRK53_RS16040	0.42	-0.0
3,522,990	+		LRK53_RS16040	0.42	-0.6
3,522,991	-		LRK53_RS16040	0.43	-0.5
3,523,075	+		LRK53_RS16040	0.47	-0.4
3,523,075	+		LRK53_RS16040	0.47	-0.8
3,523,076	-		LRK53_RS16040	0.47	-0.6
3,523,076	-		LRK53_RS16040	0.47	-0.6
3,523,076	-		LRK53_RS16040	0.47	+2.0
3,523,076	-		LRK53_RS16040	0.47	+0.3
3,523,198	+		LRK53_RS16040	0.54	+1.0
3,523,198	+		LRK53_RS16040	0.54	+0.7
3,523,198	+		LRK53_RS16040	0.54	-1.0