Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13450

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,970,159	+		LRK53_RS13440	0.86	+1.0
2,970,159	+		LRK53_RS13440	0.86	+0.6
2,970,160	-		LRK53_RS13440	0.86	-0.6
2,970,160	-		LRK53_RS13440	0.86	+1.0
2,970,160	-		LRK53_RS13440	0.86	-1.6
2,970,160	-		LRK53_RS13440	0.86	-0.0
2,970,160	-		LRK53_RS13440	0.86	-0.5
2,970,305	+				-1.2
2,970,305	+				-0.9
2,970,305	+				-1.2
2,970,305	+				-1.3
2,970,305	+				-1.5
2,970,305	+				-1.3
2,970,305	+				-1.6
2,970,305	+				-2.1
2,970,305	+				-0.0
2,970,305	+				-0.2
2,970,305	+				-0.7
2,970,305	+				-0.0
2,970,306	-				+1.3
2,970,306	-				+1.3
2,970,306	-				-0.7
2,970,306	-				-0.5
2,970,306	-				-0.0
2,970,306	-				-0.6
2,970,306	-				+2.6
2,970,306	-				-0.6
2,970,306	-				+2.0
2,970,306	-				-0.3
2,970,306	-				-1.0
2,970,393	+		LRK53_RS13445	0.15	-0.0
2,970,393	+		LRK53_RS13445	0.15	+0.2
2,970,393	+		LRK53_RS13445	0.15	-0.6
2,970,393	+		LRK53_RS13445	0.15	-1.0
2,970,393	+		LRK53_RS13445	0.15	-1.3
2,970,393	+		LRK53_RS13445	0.15	+0.2
2,970,393	+		LRK53_RS13445	0.15	-1.1
2,970,393	+		LRK53_RS13445	0.15	-0.2
2,970,393	+		LRK53_RS13445	0.15	+1.0
2,970,394	-		LRK53_RS13445	0.15	-0.0
2,970,394	-		LRK53_RS13445	0.15	+0.4
2,970,394	-		LRK53_RS13445	0.15	-0.0
2,970,394	-		LRK53_RS13445	0.15	-0.3
2,970,394	-		LRK53_RS13445	0.15	-1.3
2,970,394	-		LRK53_RS13445	0.15	-0.3
2,970,394	-		LRK53_RS13445	0.15	-1.3
2,970,394	-		LRK53_RS13445	0.15	-1.3
2,970,394	-		LRK53_RS13445	0.15	+0.8
2,970,394	-		LRK53_RS13445	0.15	-1.2
2,970,394	-		LRK53_RS13445	0.15	-0.7
2,970,394	-		LRK53_RS13445	0.15	-0.0
2,970,395	+		LRK53_RS13445	0.15	-0.6
2,970,395	+		LRK53_RS13445	0.15	-0.3
2,970,396	-		LRK53_RS13445	0.16	+1.0
2,970,396	-		LRK53_RS13445	0.16	-1.1
2,970,396	-		LRK53_RS13445	0.16	-1.3
2,970,473	+		LRK53_RS13445	0.25	+0.4
2,970,522	-		LRK53_RS13445	0.32	+0.4
2,970,522	-		LRK53_RS13445	0.32	+0.3
2,970,551	+		LRK53_RS13445	0.35	-0.0
2,970,552	-		LRK53_RS13445	0.36	-0.3
2,970,552	-		LRK53_RS13445	0.36	-2.3
2,970,976	+		LRK53_RS13445	0.90	+2.0
2,970,976	+		LRK53_RS13445	0.90	-0.5
2,970,977	-				-0.0
2,971,068	+				-1.4
2,971,068	+				-1.0
2,971,068	+				-0.5
2,971,069	-				-2.5
2,971,069	-				+0.2
2,971,069	-				+0.3
2,971,069	-				+1.0
2,971,083	+				-0.8
2,971,083	+				-0.2
2,971,083	+				+0.3
2,971,084	-				-1.5
2,971,084	-				-1.3
2,971,084	-				+0.4
2,971,084	-				-1.2
2,971,084	-				-0.6
2,971,341	+		LRK53_RS13450	0.35	-0.6
2,971,341	+		LRK53_RS13450	0.35	-0.6
2,971,341	+		LRK53_RS13450	0.35	-0.0
2,971,342	-		LRK53_RS13450	0.35	-0.0
2,971,342	-		LRK53_RS13450	0.35	+1.0
2,971,342	-		LRK53_RS13450	0.35	-0.6
2,971,342	-		LRK53_RS13450	0.35	-0.0
2,971,407	+		LRK53_RS13450	0.44	-1.3
2,971,407	+		LRK53_RS13450	0.44	+0.4
2,971,408	-		LRK53_RS13450	0.44	-2.0
2,971,408	-		LRK53_RS13450	0.44	-2.8
2,971,464	+		LRK53_RS13450	0.52	-0.3
2,971,464	+		LRK53_RS13450	0.52	-0.2
2,971,464	+		LRK53_RS13450	0.52	+0.8
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	+0.6
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	-2.3
2,971,464	+		LRK53_RS13450	0.52	-0.6
2,971,464	+		LRK53_RS13450	0.52	-2.7
2,971,464	+		LRK53_RS13450	0.52	-1.0
2,971,464	+		LRK53_RS13450	0.52	-1.3
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	-1.0
2,971,464	+		LRK53_RS13450	0.52	-1.2
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	-0.6
2,971,464	+		LRK53_RS13450	0.52	-0.6
2,971,464	+		LRK53_RS13450	0.52	-0.0
2,971,464	+		LRK53_RS13450	0.52	-0.1
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	+2.0
2,971,464	+		LRK53_RS13450	0.52	-1.3
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	-1.6
2,971,464	+		LRK53_RS13450	0.52	-1.0
2,971,464	+		LRK53_RS13450	0.52	-1.1
2,971,464	+		LRK53_RS13450	0.52	+1.0
2,971,464	+		LRK53_RS13450	0.52	+0.2
2,971,464	+		LRK53_RS13450	0.52	-1.0
2,971,465	-		LRK53_RS13450	0.52	-1.3
2,971,465	-		LRK53_RS13450	0.52	-0.2
2,971,465	-		LRK53_RS13450	0.52	+1.0
2,971,465	-		LRK53_RS13450	0.52	-1.3
2,971,465	-		LRK53_RS13450	0.52	+1.0
2,971,465	-		LRK53_RS13450	0.52	-1.1
2,971,465	-		LRK53_RS13450	0.52	+1.0
2,971,465	-		LRK53_RS13450	0.52	-0.6
2,971,465	-		LRK53_RS13450	0.52	-0.0
2,971,465	-		LRK53_RS13450	0.52	-0.6
2,971,465	-		LRK53_RS13450	0.52	-0.0
2,971,465	-		LRK53_RS13450	0.52	-1.5
2,971,465	-		LRK53_RS13450	0.52	-0.0
2,971,465	-		LRK53_RS13450	0.52	+1.0
2,971,465	-		LRK53_RS13450	0.52	+1.0
2,971,465	-		LRK53_RS13450	0.52	-1.0
2,971,465	-		LRK53_RS13450	0.52	-0.0
2,971,465	-		LRK53_RS13450	0.52	-1.3
2,971,465	-		LRK53_RS13450	0.52	+3.0
2,971,599	+		LRK53_RS13450	0.70	-0.0
2,971,599	+		LRK53_RS13450	0.70	-0.0
2,971,599	+		LRK53_RS13450	0.70	-1.6
2,971,599	+		LRK53_RS13450	0.70	-0.6
2,971,600	-		LRK53_RS13450	0.70	-0.0
2,971,689	+		LRK53_RS13450	0.83	+2.6
2,971,859	+				-0.0
2,971,859	+				+0.6
2,971,859	+				-0.0
2,971,860	-				-0.0
2,971,860	-				-1.3
2,971,860	-				-0.0
2,971,935	+				-0.1
2,971,935	+				-0.2
2,971,935	+				-2.2
2,971,936	-				-0.4
2,971,936	-				-0.0
2,971,936	-				+1.2
2,971,977	+				+0.7
2,972,190	+		LRK53_RS13455	0.28	-1.1
2,972,192	+		LRK53_RS13455	0.28	-1.3
2,972,192	+		LRK53_RS13455	0.28	-1.0
2,972,192	+		LRK53_RS13455	0.28	-1.8
2,972,192	+		LRK53_RS13455	0.28	-1.3
2,972,192	+		LRK53_RS13455	0.28	-0.3
2,972,192	+		LRK53_RS13455	0.28	+1.0
2,972,192	+		LRK53_RS13455	0.28	-0.6
2,972,192	+		LRK53_RS13455	0.28	+0.3
2,972,192	+		LRK53_RS13455	0.28	-0.6
2,972,192	+		LRK53_RS13455	0.28	-1.3
2,972,193	-		LRK53_RS13455	0.28	-0.0
2,972,193	-		LRK53_RS13455	0.28	-0.8
2,972,193	-		LRK53_RS13455	0.28	-2.2
2,972,193	-		LRK53_RS13455	0.28	+1.0
2,972,193	-		LRK53_RS13455	0.28	-1.2
2,972,193	-		LRK53_RS13455	0.28	-0.1
2,972,490	+		LRK53_RS13455	0.66	+1.0
2,972,490	+		LRK53_RS13455	0.66	-1.5
2,972,490	+		LRK53_RS13455	0.66	-0.4
2,972,490	+		LRK53_RS13455	0.66	-0.9
2,972,491	-		LRK53_RS13455	0.66	+0.8
2,972,491	-		LRK53_RS13455	0.66	-2.0
2,972,491	-		LRK53_RS13455	0.66	-1.4
2,972,491	-		LRK53_RS13455	0.66	-0.6
2,972,810	+				-0.6
2,972,810	+				-0.3
2,972,810	+				+0.3
2,972,810	+				+0.6
2,972,810	+				+0.2
2,972,810	+				+1.0
2,972,811	-				+1.0
2,972,811	-				+1.0
2,972,811	-				-1.3
2,972,811	-				-1.1