Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS13180

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,903,394	+		LRK53_RS13170	0.42	-0.9
2,903,395	-		LRK53_RS13170	0.43	-0.6
2,903,416	-		LRK53_RS13170	0.46	-0.4
2,903,476	-		LRK53_RS13170	0.56	-0.0
2,903,476	-		LRK53_RS13170	0.56	-0.4
2,903,551	-		LRK53_RS13170	0.69	-0.4
2,903,610	+		LRK53_RS13170	0.79	+0.4
2,903,610	+		LRK53_RS13170	0.79	-2.2
2,903,610	+		LRK53_RS13170	0.79	+1.0
2,903,610	+		LRK53_RS13170	0.79	-1.0
2,903,610	+		LRK53_RS13170	0.79	+0.2
2,903,611	-		LRK53_RS13170	0.79	-3.3
2,903,611	-		LRK53_RS13170	0.79	-0.7
2,903,611	-		LRK53_RS13170	0.79	-0.6
2,903,611	-		LRK53_RS13170	0.79	+0.2
2,903,611	-		LRK53_RS13170	0.79	-1.0
2,903,611	-		LRK53_RS13170	0.79	+1.0
2,903,611	-		LRK53_RS13170	0.79	-0.8
2,903,709	+				-1.6
2,903,709	+				-0.0
2,903,709	+				-0.8
2,903,709	+				+0.4
2,903,709	+				+0.4
2,903,710	-				-1.0
2,903,710	-				-0.7
2,903,801	+				-1.0
2,903,802	-				-0.4
2,903,802	-				-0.0
2,903,850	+				-0.6
2,904,525	-		LRK53_RS13180	0.73	-1.6
2,904,553	+		LRK53_RS13180	0.82	-2.4
2,904,553	+		LRK53_RS13180	0.82	-0.4
2,904,554	-		LRK53_RS13180	0.82	-1.0
2,904,617	+				-1.1
2,904,617	+				-0.6
2,904,617	+				+1.0
2,904,617	+				-1.0
2,904,617	+				-1.8
2,904,617	+				-0.6
2,904,617	+				-0.2
2,904,617	+				-1.6
2,904,617	+				-2.5
2,904,617	+				-1.8
2,904,617	+				+0.2
2,904,617	+				+0.4
2,904,617	+				-1.4
2,904,617	+				-0.8
2,904,617	+				+0.4
2,904,617	+				+1.0
2,904,617	+				-2.4
2,904,617	+				-0.6
2,904,617	+				-0.0
2,904,617	+				+1.0
2,904,617	+				-0.6
2,904,617	+				+1.2
2,904,617	+				+0.5
2,904,617	+				-0.6
2,904,617	+				-1.0
2,904,617	+				-0.4
2,904,617	+				-1.4
2,904,617	+				-1.6
2,904,617	+				-0.4
2,904,617	+				+1.4
2,904,617	+				-1.0
2,904,617	+				-1.0
2,904,617	+				-1.8
2,904,618	-				-1.0
2,904,618	-				-0.6
2,904,618	-				+0.2
2,904,618	-				+1.0
2,904,618	-				-0.2
2,904,618	-				+0.6
2,904,618	-				-0.7
2,904,618	-				-1.2
2,904,618	-				+1.0
2,904,618	-				-0.6
2,904,618	-				+0.4
2,904,618	-				-2.4
2,904,618	-				-0.0
2,904,618	-				+1.0
2,904,618	-				-0.6
2,904,618	-				-0.0
2,904,618	-				-2.5
2,904,618	-				-0.0
2,904,618	-				+2.6
2,904,618	-				-0.0
2,904,618	-				+0.5
2,904,618	-				-1.1
2,904,618	-				-0.8
2,904,618	-				-0.6
2,904,618	-				-0.4
2,904,618	-				-0.5
2,904,618	-				-0.0
2,904,618	-				-0.0
2,904,618	-				-0.8
2,904,618	-				-1.0
2,904,618	-				-1.6
2,904,618	-				-0.0
2,904,618	-				-0.0
2,904,618	-				-1.7
2,904,618	-				-0.5
2,904,618	-				-2.7
2,904,696	-				-3.6
2,904,749	+				-1.2
2,904,750	-				+1.0
2,904,750	-				-0.6
2,905,205	+		LRK53_RS13185	0.45	+0.2
2,905,281	+		LRK53_RS13185	0.59	+0.1
2,905,281	+		LRK53_RS13185	0.59	+1.4
2,905,281	+		LRK53_RS13185	0.59	-1.0
2,905,281	+		LRK53_RS13185	0.59	-1.0
2,905,282	-		LRK53_RS13185	0.59	-1.0
2,905,282	-		LRK53_RS13185	0.59	-0.8
2,905,282	-		LRK53_RS13185	0.59	-1.4
2,905,282	-		LRK53_RS13185	0.59	-1.0
2,905,282	-		LRK53_RS13185	0.59	-1.0
2,905,282	-		LRK53_RS13185	0.59	-1.6
2,905,282	-		LRK53_RS13185	0.59	-1.8
2,905,282	-		LRK53_RS13185	0.59	-0.0
2,905,282	-		LRK53_RS13185	0.59	+0.7
2,905,282	-		LRK53_RS13185	0.59	-1.6
2,905,383	+		LRK53_RS13185	0.76	-1.1
2,905,383	+		LRK53_RS13185	0.76	-0.6
2,905,383	+		LRK53_RS13185	0.76	+0.4
2,905,384	-		LRK53_RS13185	0.77	-0.3
2,905,540	+				-0.4
2,905,540	+				-1.3
2,905,540	+				-0.0
2,905,540	+				-1.8
2,905,540	+				-0.0
2,905,540	+				-0.6
2,905,541	-				-1.8
2,905,541	-				+0.2
2,905,541	-				-1.8
2,905,552	+				-1.2
2,905,552	+				-0.6
2,905,552	+				+1.6
2,905,552	+				+1.0
2,905,552	+				-0.7
2,905,552	+				+0.6
2,905,552	+				-1.4
2,905,553	-				+1.2
2,905,553	-				-0.7
2,905,553	-				-0.8
2,905,553	-				+1.0
2,905,553	-				-0.4
2,905,553	-				-0.0
2,905,553	-				-1.0
2,905,553	-				-1.1