Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12555

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,778,003	+				+2.6
2,778,003	+				-1.1
2,778,003	+				-0.9
2,778,003	+				-0.5
2,778,003	+				-0.3
2,778,003	+				+0.1
2,778,003	+				-0.0
2,778,003	+				-0.6
2,778,003	+				-0.0
2,778,003	+				-3.7
2,778,003	+				-0.2
2,778,003	+				-0.0
2,778,003	+				-0.9
2,778,003	+				-1.0
2,778,003	+				+0.4
2,778,003	+				-0.3
2,778,003	+				-0.0
2,778,003	+				-0.0
2,778,003	+				-1.0
2,778,003	+				-0.8
2,778,003	+				+2.6
2,778,003	+				-0.1
2,778,003	+				-0.8
2,778,003	+				-1.6
2,778,003	+				-1.7
2,778,003	+				-0.0
2,778,003	+				+0.5
2,778,003	+				+0.2
2,778,003	+				-0.6
2,778,003	+				-0.6
2,778,003	+				-1.7
2,778,003	+				-0.1
2,778,003	+				-1.0
2,778,003	+				-1.0
2,778,003	+				-0.0
2,778,003	+				-0.6
2,778,003	+				+0.4
2,778,003	+				-1.6
2,778,003	+				-0.6
2,778,003	+				-0.8
2,778,003	+				-1.3
2,778,003	+				-0.4
2,778,003	+				+2.6
2,778,003	+				-1.2
2,778,003	+				-1.0
2,778,003	+				-0.6
2,778,003	+				+0.4
2,778,003	+				-2.9
2,778,003	+				-0.6
2,778,003	+				-3.2
2,778,003	+				-0.0
2,778,003	+				-0.8
2,778,003	+				-1.0
2,778,004	-				-0.5
2,778,004	-				-1.0
2,778,004	-				+1.0
2,778,004	-				+2.0
2,778,004	-				-1.0
2,778,004	-				-1.0
2,778,004	-				-0.6
2,778,004	-				-0.8
2,778,004	-				-1.0
2,778,004	-				-0.8
2,778,004	-				-0.8
2,778,004	-				-2.3
2,778,004	-				+0.4
2,778,004	-				-1.6
2,778,004	-				-0.0
2,778,004	-				+1.0
2,778,004	-				+1.0
2,778,004	-				+1.0
2,778,004	-				-0.2
2,778,004	-				-0.0
2,778,004	-				-1.8
2,778,004	-				+1.0
2,778,004	-				-1.2
2,778,004	-				-0.9
2,778,004	-				-1.6
2,778,004	-				-0.1
2,778,004	-				+0.2
2,778,004	-				-0.0
2,778,004	-				-1.6
2,778,004	-				-0.6
2,778,004	-				-1.7
2,778,004	-				-0.0
2,778,004	-				+1.0
2,778,004	-				-1.5
2,778,004	-				+2.0
2,778,004	-				-2.6
2,778,004	-				-2.4
2,778,004	-				-0.0
2,778,064	+				-0.4
2,778,064	+				-0.2
2,778,064	+				-1.0
2,778,065	-				-0.0
2,778,065	-				-0.9
2,778,065	-				-0.0
2,778,065	-				-1.0
2,778,065	-				-1.0
2,778,245	+				-1.8
2,778,245	+				-0.8
2,778,245	+				-1.3
2,778,245	+				+1.0
2,778,245	+				-0.3
2,778,351	+		LRK53_RS12550	0.35	+0.4
2,778,351	+		LRK53_RS12550	0.35	-0.3
2,778,352	-		LRK53_RS12550	0.35	-0.4
2,778,352	-		LRK53_RS12550	0.35	-0.9
2,778,352	-		LRK53_RS12550	0.35	-0.1
2,778,352	-		LRK53_RS12550	0.35	+0.2
2,778,352	-		LRK53_RS12550	0.35	-0.8
2,778,352	-		LRK53_RS12550	0.35	+0.2
2,778,352	-		LRK53_RS12550	0.35	-0.0
2,778,352	-		LRK53_RS12550	0.35	-0.7
2,778,352	-		LRK53_RS12550	0.35	-0.9
2,778,417	-		LRK53_RS12550	0.51	-0.6
2,778,458	+		LRK53_RS12550	0.61	-0.7
2,778,458	+		LRK53_RS12550	0.61	-1.8
2,778,458	+		LRK53_RS12550	0.61	-1.1
2,778,458	+		LRK53_RS12550	0.61	+0.6
2,778,458	+		LRK53_RS12550	0.61	-0.3
2,778,458	+		LRK53_RS12550	0.61	-2.1
2,778,458	+		LRK53_RS12550	0.61	-2.5
2,778,458	+		LRK53_RS12550	0.61	-2.2
2,778,458	+		LRK53_RS12550	0.61	-1.1
2,778,458	+		LRK53_RS12550	0.61	-1.0
2,778,458	+		LRK53_RS12550	0.61	-0.9
2,778,458	+		LRK53_RS12550	0.61	-0.6
2,778,459	-		LRK53_RS12550	0.61	-1.8
2,778,459	-		LRK53_RS12550	0.61	+1.0
2,778,459	-		LRK53_RS12550	0.61	-1.5
2,778,459	-		LRK53_RS12550	0.61	+1.0
2,778,459	-		LRK53_RS12550	0.61	-0.0
2,778,459	-		LRK53_RS12550	0.61	-2.7
2,778,467	+		LRK53_RS12550	0.63	-0.5
2,778,468	-		LRK53_RS12550	0.63	-1.4
2,778,468	-		LRK53_RS12550	0.63	-2.3
2,778,468	-		LRK53_RS12550	0.63	+1.0
2,778,468	-		LRK53_RS12550	0.63	-1.7
2,778,472	+		LRK53_RS12550	0.64	-0.0
2,778,515	+		LRK53_RS12550	0.75	-0.0
2,778,515	+		LRK53_RS12550	0.75	-1.6
2,778,515	+		LRK53_RS12550	0.75	+0.3
2,778,515	+		LRK53_RS12550	0.75	-0.0
2,778,515	+		LRK53_RS12550	0.75	-0.5
2,778,515	+		LRK53_RS12550	0.75	-1.3
2,778,515	+		LRK53_RS12550	0.75	-0.5
2,778,515	+		LRK53_RS12550	0.75	-1.3
2,778,515	+		LRK53_RS12550	0.75	+1.0
2,778,515	+		LRK53_RS12550	0.75	-1.3
2,778,515	+		LRK53_RS12550	0.75	+1.6
2,778,515	+		LRK53_RS12550	0.75	+1.0
2,778,515	+		LRK53_RS12550	0.75	-1.9
2,778,515	+		LRK53_RS12550	0.75	-0.7
2,778,515	+		LRK53_RS12550	0.75	-0.9
2,778,515	+		LRK53_RS12550	0.75	+0.6
2,778,515	+		LRK53_RS12550	0.75	+1.0
2,778,515	+		LRK53_RS12550	0.75	+3.0
2,778,515	+		LRK53_RS12550	0.75	-0.0
2,778,515	+		LRK53_RS12550	0.75	-2.0
2,778,515	+		LRK53_RS12550	0.75	-0.3
2,778,515	+		LRK53_RS12550	0.75	-0.0
2,778,515	+		LRK53_RS12550	0.75	-1.0
2,778,515	+		LRK53_RS12550	0.75	-0.3
2,778,515	+		LRK53_RS12550	0.75	+1.0
2,778,515	+		LRK53_RS12550	0.75	-0.0
2,778,515	+		LRK53_RS12550	0.75	-0.6
2,778,515	+		LRK53_RS12550	0.75	-0.2
2,778,515	+		LRK53_RS12550	0.75	+1.0
2,778,515	+		LRK53_RS12550	0.75	-1.8
2,778,516	-		LRK53_RS12550	0.75	-0.3
2,778,516	-		LRK53_RS12550	0.75	-1.6
2,778,516	-		LRK53_RS12550	0.75	-0.0
2,778,516	-		LRK53_RS12550	0.75	-0.9
2,778,516	-		LRK53_RS12550	0.75	-0.4
2,778,516	-		LRK53_RS12550	0.75	-0.6
2,778,516	-		LRK53_RS12550	0.75	-0.1
2,778,516	-		LRK53_RS12550	0.75	+0.7
2,778,516	-		LRK53_RS12550	0.75	-1.3
2,778,516	-		LRK53_RS12550	0.75	+2.0
2,778,516	-		LRK53_RS12550	0.75	-0.6
2,778,516	-		LRK53_RS12550	0.75	-1.3
2,778,516	-		LRK53_RS12550	0.75	-0.7
2,778,516	-		LRK53_RS12550	0.75	-0.0
2,778,516	-		LRK53_RS12550	0.75	+0.6
2,778,516	-		LRK53_RS12550	0.75	+0.4
2,778,516	-		LRK53_RS12550	0.75	-0.6
2,778,516	-		LRK53_RS12550	0.75	-0.3
2,778,516	-		LRK53_RS12550	0.75	-1.0
2,778,516	-		LRK53_RS12550	0.75	-0.8
2,778,516	-		LRK53_RS12550	0.75	+1.0
2,778,516	-		LRK53_RS12550	0.75	-1.6
2,778,516	-		LRK53_RS12550	0.75	-0.0
2,778,516	-		LRK53_RS12550	0.75	+1.0
2,778,516	-		LRK53_RS12550	0.75	+0.6
2,778,516	-		LRK53_RS12550	0.75	-0.8
2,778,516	-		LRK53_RS12550	0.75	+0.5
2,778,516	-		LRK53_RS12550	0.75	-2.3
2,778,731	+				-0.3
2,778,731	+				+1.0
2,778,732	-				-1.2
2,778,732	-				-1.4
2,778,784	+				-0.7
2,778,784	+				-0.0
2,778,784	+				-0.6
2,778,784	+				-1.8
2,778,784	+				-1.3
2,778,785	-				-1.3
2,778,785	-				-2.0
2,778,785	-				+0.2
2,778,785	-				-0.7
2,778,787	+				-0.9
2,778,787	+				+0.4
2,778,787	+				-0.9
2,778,787	+				-0.8
2,778,787	+				-0.0
2,778,787	+				-0.8
2,778,787	+				-1.3
2,778,787	+				-1.0
2,778,787	+				-0.1
2,778,787	+				-0.6
2,778,787	+				-0.8
2,778,787	+				-1.0
2,778,787	+				-0.6
2,778,787	+				+0.2
2,778,787	+				-2.0
2,778,787	+				-0.1
2,778,787	+				-0.6
2,778,788	-				-0.0
2,778,788	-				-1.0
2,778,788	-				-0.0
2,778,788	-				-2.0
2,778,788	-				-0.2
2,778,788	-				-0.8
2,778,788	-				+1.0
2,778,788	-				-0.6
2,778,788	-				+1.0
2,778,788	-				+2.0
2,778,788	-				+0.2
2,778,788	-				-0.8
2,778,788	-				-0.7
2,778,788	-				-1.2
2,778,788	-				-0.4
2,778,810	+				-1.3
2,778,810	+				+1.0
2,778,810	+				-0.9
2,778,810	+				-1.4
2,778,810	+				-0.1
2,778,810	+				-0.6
2,778,810	+				-0.6
2,778,810	+				-2.2
2,778,811	-				-0.7
2,778,811	-				+0.5
2,778,811	-				-0.2
2,778,811	-				-0.3
2,778,811	-				-0.0
2,778,811	-				-1.3
2,778,811	-				-0.3
2,778,811	-				+0.4
2,778,811	-				-1.0
2,778,811	-				+1.4
2,778,886	-				-0.2
2,778,886	-				-0.3
2,778,886	-				-0.0
2,779,121	+		LRK53_RS12555	0.25	-1.0
2,779,121	+		LRK53_RS12555	0.25	-0.8
2,779,122	-		LRK53_RS12555	0.25	-0.2
2,779,206	-		LRK53_RS12555	0.31	-2.1
2,779,206	-		LRK53_RS12555	0.31	-1.6
2,779,206	-		LRK53_RS12555	0.31	-0.6
2,779,431	+		LRK53_RS12555	0.46	-2.0
2,779,652	+		LRK53_RS12555	0.62	-1.0
2,779,652	+		LRK53_RS12555	0.62	-0.0
2,779,652	+		LRK53_RS12555	0.62	-1.6
2,779,652	+		LRK53_RS12555	0.62	-1.1
2,779,652	+		LRK53_RS12555	0.62	-0.6
2,779,652	+		LRK53_RS12555	0.62	-0.0
2,779,652	+		LRK53_RS12555	0.62	-0.3
2,779,652	+		LRK53_RS12555	0.62	-1.6
2,779,652	+		LRK53_RS12555	0.62	+1.0
2,779,652	+		LRK53_RS12555	0.62	-0.8
2,779,652	+		LRK53_RS12555	0.62	-0.2
2,779,652	+		LRK53_RS12555	0.62	-0.9
2,779,652	+		LRK53_RS12555	0.62	-2.0
2,779,653	-		LRK53_RS12555	0.62	-1.0
2,779,653	-		LRK53_RS12555	0.62	-1.6
2,779,653	-		LRK53_RS12555	0.62	-0.0
2,779,653	-		LRK53_RS12555	0.62	-0.1
2,779,653	-		LRK53_RS12555	0.62	-0.8
2,779,653	-		LRK53_RS12555	0.62	-0.3
2,779,653	-		LRK53_RS12555	0.62	+1.0
2,779,737	-		LRK53_RS12555	0.68	-1.0
2,779,737	-		LRK53_RS12555	0.68	+1.0
2,779,737	-		LRK53_RS12555	0.68	-2.5
2,779,766	+		LRK53_RS12555	0.70	-1.7
2,779,766	+		LRK53_RS12555	0.70	-1.0
2,779,767	-		LRK53_RS12555	0.70	-2.0
2,779,767	-		LRK53_RS12555	0.70	-2.8
2,779,791	-		LRK53_RS12555	0.71	-0.8
2,779,791	-		LRK53_RS12555	0.71	+1.0
2,779,814	+		LRK53_RS12555	0.73	-1.5
2,779,814	+		LRK53_RS12555	0.73	-0.6
2,779,814	+		LRK53_RS12555	0.73	-1.6
2,779,815	-		LRK53_RS12555	0.73	-1.3
2,779,871	+		LRK53_RS12555	0.77	+1.0
2,779,871	+		LRK53_RS12555	0.77	+2.0
2,779,871	+		LRK53_RS12555	0.77	-2.0
2,779,872	-		LRK53_RS12555	0.77	+1.0
2,779,872	-		LRK53_RS12555	0.77	-1.6
2,779,872	-		LRK53_RS12555	0.77	-0.0
2,779,872	-		LRK53_RS12555	0.77	-1.3
2,779,872	-		LRK53_RS12555	0.77	-0.0
2,779,872	-		LRK53_RS12555	0.77	-1.2
2,779,872	-		LRK53_RS12555	0.77	-1.2
2,779,872	-		LRK53_RS12555	0.77	-0.2
2,779,872	-		LRK53_RS12555	0.77	-3.8
2,780,123	-				-1.0
2,780,232	+				-0.0
2,780,232	+				+1.0
2,780,233	-				-0.9
2,780,233	-				+1.0
2,780,233	-				-0.0
2,780,284	-				+0.4
2,780,284	-				-1.0
2,780,389	+				-1.2
2,780,389	+				-3.8
2,780,389	+				-0.0
2,780,389	+				+0.2
2,780,389	+				-0.8
2,780,390	-				-0.4
2,780,390	-				+0.1
2,780,390	-				+1.0
2,780,390	-				-2.7
2,780,390	-				-0.8
2,780,471	-		LRK53_RS12560	0.11	-1.3
2,780,471	-		LRK53_RS12560	0.11	-1.6
2,780,471	-		LRK53_RS12560	0.11	-0.0
2,780,491	+		LRK53_RS12560	0.13	+0.1
2,780,492	-		LRK53_RS12560	0.13	-1.8
2,780,602	+		LRK53_RS12560	0.20	-0.2
2,780,602	+		LRK53_RS12560	0.20	-1.0
2,780,602	+		LRK53_RS12560	0.20	-0.3
2,780,602	+		LRK53_RS12560	0.20	-0.2
2,780,603	-		LRK53_RS12560	0.20	-2.2
2,780,603	-		LRK53_RS12560	0.20	-0.6
2,780,603	-		LRK53_RS12560	0.20	+1.0
2,780,603	-		LRK53_RS12560	0.20	-0.5
2,780,603	-		LRK53_RS12560	0.20	-0.0
2,780,603	-		LRK53_RS12560	0.20	-0.2
2,780,633	-		LRK53_RS12560	0.22	-0.0
2,780,642	+		LRK53_RS12560	0.22	-0.3
2,780,642	+		LRK53_RS12560	0.22	-1.5
2,780,642	+		LRK53_RS12560	0.22	+2.0
2,780,642	+		LRK53_RS12560	0.22	-0.6
2,780,642	+		LRK53_RS12560	0.22	-1.2
2,780,642	+		LRK53_RS12560	0.22	+0.1
2,780,643	-		LRK53_RS12560	0.22	+0.4
2,780,643	-		LRK53_RS12560	0.22	-0.5
2,780,643	-		LRK53_RS12560	0.22	+0.8
2,780,662	+		LRK53_RS12560	0.24	-0.2
2,780,663	-		LRK53_RS12560	0.24	+0.4
2,780,756	-		LRK53_RS12560	0.30	+1.0
2,780,773	+		LRK53_RS12560	0.31	-1.6
2,780,773	+		LRK53_RS12560	0.31	-1.0
2,780,773	+		LRK53_RS12560	0.31	-1.5
2,780,773	+		LRK53_RS12560	0.31	-0.3
2,780,773	+		LRK53_RS12560	0.31	-1.9
2,780,773	+		LRK53_RS12560	0.31	+1.4
2,780,773	+		LRK53_RS12560	0.31	-0.8
2,780,773	+		LRK53_RS12560	0.31	-0.3
2,780,774	-		LRK53_RS12560	0.31	-0.8
2,780,774	-		LRK53_RS12560	0.31	-0.0
2,780,774	-		LRK53_RS12560	0.31	-1.8
2,780,774	-		LRK53_RS12560	0.31	-0.8
2,780,866	+		LRK53_RS12560	0.37	-0.6
2,780,866	+		LRK53_RS12560	0.37	+1.6
2,780,866	+		LRK53_RS12560	0.37	-0.7
2,780,866	+		LRK53_RS12560	0.37	-0.0
2,780,866	+		LRK53_RS12560	0.37	-0.2
2,780,866	+		LRK53_RS12560	0.37	+0.2
2,780,866	+		LRK53_RS12560	0.37	-2.4
2,780,866	+		LRK53_RS12560	0.37	-0.0
2,780,866	+		LRK53_RS12560	0.37	-1.9
2,780,866	+		LRK53_RS12560	0.37	-1.4
2,780,867	-		LRK53_RS12560	0.37	-0.0
2,780,867	-		LRK53_RS12560	0.37	-0.4
2,780,867	-		LRK53_RS12560	0.37	-0.9
2,780,867	-		LRK53_RS12560	0.37	-0.6
2,780,867	-		LRK53_RS12560	0.37	-0.6
2,780,867	-		LRK53_RS12560	0.37	+0.4
2,780,867	-		LRK53_RS12560	0.37	+1.7
2,780,867	-		LRK53_RS12560	0.37	-0.4
2,780,867	-		LRK53_RS12560	0.37	+2.0
2,780,896	+		LRK53_RS12560	0.39	-2.9
2,780,896	+		LRK53_RS12560	0.39	+1.0
2,780,897	-		LRK53_RS12560	0.39	+2.6
2,780,897	-		LRK53_RS12560	0.39	-1.2
2,781,008	-		LRK53_RS12560	0.46	+0.4
2,781,008	-		LRK53_RS12560	0.46	-0.0
2,781,058	+		LRK53_RS12560	0.49	-0.0
2,781,058	+		LRK53_RS12560	0.49	-1.0
2,781,058	+		LRK53_RS12560	0.49	+0.3
2,781,058	+		LRK53_RS12560	0.49	-3.1
2,781,058	+		LRK53_RS12560	0.49	-0.6
2,781,058	+		LRK53_RS12560	0.49	+0.4
2,781,059	-		LRK53_RS12560	0.49	+1.0
2,781,059	-		LRK53_RS12560	0.49	-1.0
2,781,082	+		LRK53_RS12560	0.51	-0.3
2,781,083	-		LRK53_RS12560	0.51	+2.0
2,781,083	-		LRK53_RS12560	0.51	+0.4
2,781,083	-		LRK53_RS12560	0.51	+1.0
2,781,188	-		LRK53_RS12560	0.57	-1.8