Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12275

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,723,083	+				-1.8
2,723,083	+				-1.6
2,723,083	+				-1.1
2,723,083	+				-1.0
2,723,083	+				-0.3
2,723,083	+				-3.5
2,723,084	-				-1.2
2,723,084	-				-1.5
2,723,084	-				-1.0
2,723,084	-				-2.1
2,723,084	-				-0.0
2,723,084	-				-0.0
2,723,084	-				-0.8
2,723,084	-				-0.3
2,723,084	-				-1.8
2,723,084	-				-0.4
2,723,084	-				-1.4
2,723,084	-				-0.0
2,723,084	-				-2.6
2,723,084	-				-1.0
2,723,084	-				+1.0
2,723,494	+		LRK53_RS12270	0.50	-0.6
2,723,494	+		LRK53_RS12270	0.50	-1.0
2,723,494	+		LRK53_RS12270	0.50	-1.3
2,723,494	+		LRK53_RS12270	0.50	-0.0
2,723,494	+		LRK53_RS12270	0.50	-0.5
2,723,495	-		LRK53_RS12270	0.50	-2.0
2,723,495	-		LRK53_RS12270	0.50	-0.0
2,723,495	-		LRK53_RS12270	0.50	-0.3
2,723,495	-		LRK53_RS12270	0.50	-2.0
2,723,495	-		LRK53_RS12270	0.50	-0.0
2,723,495	-		LRK53_RS12270	0.50	-0.7
2,723,495	-		LRK53_RS12270	0.50	+1.0
2,723,577	+		LRK53_RS12270	0.60	-0.7
2,723,590	+		LRK53_RS12270	0.62	-1.8
2,723,590	+		LRK53_RS12270	0.62	-3.2
2,723,590	+		LRK53_RS12270	0.62	-1.0
2,723,590	+		LRK53_RS12270	0.62	-1.5
2,723,590	+		LRK53_RS12270	0.62	-1.6
2,723,591	-		LRK53_RS12270	0.62	-2.5
2,723,591	-		LRK53_RS12270	0.62	+2.0
2,723,591	-		LRK53_RS12270	0.62	-1.0
2,723,591	-		LRK53_RS12270	0.62	-0.0
2,723,591	-		LRK53_RS12270	0.62	-0.6
2,723,591	-		LRK53_RS12270	0.62	-2.3
2,723,591	-		LRK53_RS12270	0.62	-0.0
2,723,591	-		LRK53_RS12270	0.62	+1.0
2,723,591	-		LRK53_RS12270	0.62	+0.2
2,723,591	-		LRK53_RS12270	0.62	-0.6
2,723,591	-		LRK53_RS12270	0.62	-1.1
2,723,714	-		LRK53_RS12270	0.77	-1.9
2,723,999	-				-0.6
2,724,031	+				+0.2
2,724,031	+				-0.8
2,724,031	+				+1.2
2,724,031	+				+2.0
2,724,031	+				-0.3
2,724,031	+				-1.0
2,724,031	+				-1.0
2,724,031	+				-1.8
2,724,031	+				-0.4
2,724,031	+				-1.0
2,724,031	+				-1.2
2,724,031	+				-1.2
2,724,031	+				-2.2
2,724,031	+				-0.3
2,724,031	+				-1.3
2,724,031	+				-0.8
2,724,031	+				+0.2
2,724,031	+				-1.3
2,724,031	+				-0.0
2,724,031	+				-0.0
2,724,031	+				-1.6
2,724,032	-				-2.2
2,724,032	-				-1.7
2,724,032	-				-1.8
2,724,032	-				-1.2
2,724,032	-				-0.0
2,724,265	+		LRK53_RS12275	0.41	-1.2
2,724,265	+		LRK53_RS12275	0.41	-1.8
2,724,265	+		LRK53_RS12275	0.41	-0.0
2,724,265	+		LRK53_RS12275	0.41	+0.4
2,724,265	+		LRK53_RS12275	0.41	-1.6
2,724,266	-		LRK53_RS12275	0.41	-1.3
2,724,266	-		LRK53_RS12275	0.41	+0.4
2,724,586	+				-3.1
2,724,586	+				+1.4
2,724,586	+				-1.9
2,724,587	-				+0.2
2,724,587	-				-0.7
2,724,587	-				-0.0
2,724,587	-				+0.2
2,724,621	+				+2.0
2,724,621	+				-0.3
2,724,622	-				-0.6
2,724,622	-				-0.5
2,724,622	-				-0.8
2,724,622	-				-1.0
2,724,622	-				+0.3
2,724,743	+				-1.3
2,724,743	+				-0.2
2,724,743	+				-1.3
2,724,743	+				-0.9
2,724,743	+				-1.0
2,724,743	+				-2.0
2,724,743	+				-0.6
2,724,743	+				-0.6
2,724,743	+				-1.6
2,724,743	+				-0.7
2,724,743	+				+0.4
2,724,743	+				-0.9
2,724,743	+				-0.6
2,724,743	+				-0.0
2,724,743	+				-0.0
2,724,743	+				+0.2
2,724,743	+				-0.8
2,724,743	+				-1.0
2,724,743	+				+1.0
2,724,743	+				+1.0
2,724,743	+				-1.7
2,724,743	+				-0.4
2,724,743	+				+1.0
2,724,743	+				-1.6
2,724,743	+				+0.6
2,724,743	+				-0.0
2,724,744	-				+1.0
2,724,744	-				+1.3
2,724,744	-				-1.2
2,724,744	-				-1.7
2,724,744	-				+1.0
2,724,744	-				-1.3
2,724,744	-				-0.5
2,724,744	-				+2.6
2,724,744	-				+0.2
2,724,744	-				+1.0
2,724,744	-				+0.4
2,724,782	+				-0.6
2,724,782	+				-0.8
2,724,782	+				-0.0
2,724,782	+				-0.9
2,724,782	+				-0.0
2,724,782	+				+2.0
2,724,782	+				-1.4
2,724,782	+				+1.6
2,724,782	+				-0.4
2,724,782	+				-0.5
2,724,783	-				-0.7
2,724,783	-				-0.5
2,724,783	-				-1.0
2,724,783	-				+1.0
2,724,783	-				-1.6
2,724,783	-				-0.6
2,724,783	-				-0.0
2,725,283	+		LRK53_RS12280	0.54	-1.5
2,725,283	+		LRK53_RS12280	0.54	+1.0
2,725,284	-		LRK53_RS12280	0.54	-0.3
2,725,284	-		LRK53_RS12280	0.54	-0.8
2,725,284	-		LRK53_RS12280	0.54	-1.3
2,725,284	-		LRK53_RS12280	0.54	-0.6
2,725,284	-		LRK53_RS12280	0.54	-1.0