Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11620

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,587,365	+				-0.2
2,587,366	-				-1.3
2,587,421	+				-0.6
2,587,421	+				+0.8
2,587,421	+				-3.7
2,587,422	-				-1.8
2,587,422	-				+0.3
2,587,422	-				-1.0
2,587,443	+				-0.5
2,587,443	+				-2.2
2,587,443	+				-1.2
2,587,443	+				+2.0
2,587,444	-				+1.0
2,587,444	-				-0.0
2,587,444	-				+0.7
2,587,444	-				+1.0
2,587,444	-				-1.0
2,587,444	-				-1.0
2,587,468	+		LRK53_RS11610	0.14	-0.3
2,587,468	+		LRK53_RS11610	0.14	-1.5
2,587,584	+		LRK53_RS11610	0.40	-0.0
2,587,685	+		LRK53_RS11610	0.64	-1.6
2,587,686	-		LRK53_RS11610	0.64	-1.6
2,587,717	+		LRK53_RS11610	0.71	-0.5
2,587,718	-		LRK53_RS11610	0.71	-0.8
2,587,718	-		LRK53_RS11610	0.71	-0.0
2,587,744	-		LRK53_RS11610	0.77	+0.5
2,587,750	-		LRK53_RS11610	0.79	-1.3
2,587,781	+		LRK53_RS11610	0.86	-1.8
2,587,803	-				-1.8
2,587,822	-				-0.6
2,587,822	-				-0.0
2,587,822	-				-0.0
2,587,835	-				-2.2
2,587,901	+				-1.6
2,587,901	+				+0.6
2,587,901	+				-0.3
2,587,901	+				-0.0
2,587,901	+				-1.3
2,587,901	+				-1.3
2,587,901	+				-0.2
2,587,901	+				-2.5
2,587,901	+				-0.6
2,587,901	+				-0.7
2,587,901	+				-0.3
2,587,901	+				+1.0
2,587,901	+				-1.8
2,587,901	+				+0.5
2,587,901	+				+0.2
2,587,901	+				+1.0
2,587,901	+				+0.4
2,587,901	+				-1.0
2,587,901	+				-1.3
2,587,902	-				-0.0
2,587,902	-				+1.0
2,587,902	-				+1.0
2,587,902	-				-1.8
2,587,902	-				-0.9
2,587,902	-				-0.0
2,587,902	-				-1.8
2,587,902	-				-0.0
2,587,902	-				-0.9
2,587,902	-				+1.0
2,587,902	-				-0.6
2,587,940	+		LRK53_RS11615	0.13	-0.0
2,587,940	+		LRK53_RS11615	0.13	+2.0
2,587,940	+		LRK53_RS11615	0.13	+0.3
2,587,940	+		LRK53_RS11615	0.13	-0.2
2,587,940	+		LRK53_RS11615	0.13	-0.0
2,587,940	+		LRK53_RS11615	0.13	-2.0
2,587,940	+		LRK53_RS11615	0.13	-2.3
2,587,940	+		LRK53_RS11615	0.13	-0.6
2,587,940	+		LRK53_RS11615	0.13	-1.6
2,587,940	+		LRK53_RS11615	0.13	+0.3
2,587,940	+		LRK53_RS11615	0.13	-2.5
2,587,940	+		LRK53_RS11615	0.13	-0.4
2,587,940	+		LRK53_RS11615	0.13	-0.7
2,587,940	+		LRK53_RS11615	0.13	-0.8
2,587,940	+		LRK53_RS11615	0.13	+0.3
2,587,940	+		LRK53_RS11615	0.13	-1.3
2,587,940	+		LRK53_RS11615	0.13	-1.3
2,587,940	+		LRK53_RS11615	0.13	+0.4
2,587,940	+		LRK53_RS11615	0.13	+1.0
2,587,941	-		LRK53_RS11615	0.14	-0.5
2,587,941	-		LRK53_RS11615	0.14	-0.6
2,587,941	-		LRK53_RS11615	0.14	-0.6
2,587,941	-		LRK53_RS11615	0.14	-0.0
2,587,941	-		LRK53_RS11615	0.14	+0.4
2,587,941	-		LRK53_RS11615	0.14	+0.2
2,587,941	-		LRK53_RS11615	0.14	-0.6
2,587,941	-		LRK53_RS11615	0.14	-2.5
2,587,941	-		LRK53_RS11615	0.14	-0.7
2,588,204	+		LRK53_RS11615	0.75	-1.2
2,588,204	+		LRK53_RS11615	0.75	-0.6
2,588,204	+		LRK53_RS11615	0.75	-1.7
2,588,204	+		LRK53_RS11615	0.75	-0.2
2,588,204	+		LRK53_RS11615	0.75	-0.7
2,588,204	+		LRK53_RS11615	0.75	-1.8
2,588,204	+		LRK53_RS11615	0.75	-0.5
2,588,205	-		LRK53_RS11615	0.75	-0.4
2,588,205	-		LRK53_RS11615	0.75	-1.0
2,588,205	-		LRK53_RS11615	0.75	+1.0
2,588,300	+				+0.2
2,588,300	+				-0.0
2,588,300	+				-1.0
2,588,402	+		LRK53_RS11620	0.67	-0.4
2,588,402	+		LRK53_RS11620	0.67	+1.6
2,588,402	+		LRK53_RS11620	0.67	-0.0
2,588,403	-		LRK53_RS11620	0.67	+1.0
2,588,403	-		LRK53_RS11620	0.67	-0.6
2,588,403	-		LRK53_RS11620	0.67	-0.2
2,588,445	+				-0.2
2,588,445	+				-1.3
2,588,445	+				-0.0
2,588,445	+				-0.0
2,588,445	+				+0.2
2,588,445	+				+0.4
2,588,446	-				-2.0
2,588,446	-				-0.6
2,588,446	-				-0.8
2,588,539	+				+0.3
2,588,539	+				-0.5
2,588,540	-				-1.2
2,588,540	-				+0.7
2,588,540	-				+1.0
2,588,752	+				-1.0
2,588,752	+				-0.0
2,588,752	+				-0.6
2,588,752	+				+1.0
2,588,752	+				-1.2
2,588,752	+				-1.9
2,588,752	+				-1.3
2,588,752	+				-0.0
2,588,753	-				-0.2
2,588,753	-				+1.0
2,588,803	+				-1.3
2,588,803	+				-0.2
2,588,803	+				-0.6
2,588,803	+				+0.8
2,588,804	-				+1.0
2,588,804	-				+0.5
2,588,967	+				-2.0
2,588,967	+				-0.3
2,588,967	+				-0.9
2,588,967	+				+1.0
2,588,968	-				+0.7
2,588,968	-				-0.2
2,588,968	-				+1.4
2,588,968	-				+0.4
2,588,968	-				-0.6
2,588,968	-				-0.0
2,589,067	+				-0.0
2,589,068	-				+0.2
2,589,113	+				+1.0
2,589,113	+				+0.2
2,589,113	+				-0.5
2,589,113	+				-0.7
2,589,114	-				+2.0
2,589,114	-				-0.2
2,589,114	-				-0.7
2,589,114	-				-0.2
2,589,114	-				-0.6
2,589,152	+				+1.0
2,589,152	+				+1.0
2,589,305	+		LRK53_RS11625	0.19	-1.8
2,589,305	+		LRK53_RS11625	0.19	-0.7
2,589,305	+		LRK53_RS11625	0.19	-1.6
2,589,305	+		LRK53_RS11625	0.19	-1.0
2,589,305	+		LRK53_RS11625	0.19	+0.2
2,589,305	+		LRK53_RS11625	0.19	+0.0
2,589,305	+		LRK53_RS11625	0.19	-0.6
2,589,305	+		LRK53_RS11625	0.19	+1.0
2,589,305	+		LRK53_RS11625	0.19	-1.1
2,589,305	+		LRK53_RS11625	0.19	-1.0
2,589,305	+		LRK53_RS11625	0.19	-0.0
2,589,305	+		LRK53_RS11625	0.19	+2.6
2,589,305	+		LRK53_RS11625	0.19	-0.7
2,589,305	+		LRK53_RS11625	0.19	+2.0
2,589,306	-		LRK53_RS11625	0.19	-2.5
2,589,306	-		LRK53_RS11625	0.19	-0.6
2,589,306	-		LRK53_RS11625	0.19	-0.8
2,589,306	-		LRK53_RS11625	0.19	-0.5
2,589,306	-		LRK53_RS11625	0.19	+0.3
2,589,306	-		LRK53_RS11625	0.19	-0.0
2,589,306	-		LRK53_RS11625	0.19	+1.6
2,589,306	-		LRK53_RS11625	0.19	-1.0
2,589,306	-		LRK53_RS11625	0.19	-1.6
2,589,306	-		LRK53_RS11625	0.19	-0.0
2,589,306	-		LRK53_RS11625	0.19	+1.0
2,589,306	-		LRK53_RS11625	0.19	-0.4
2,589,306	-		LRK53_RS11625	0.19	-1.3
2,589,419	+		LRK53_RS11625	0.27	-1.0
2,589,419	+		LRK53_RS11625	0.27	-0.4
2,589,419	+		LRK53_RS11625	0.27	-1.3
2,589,419	+		LRK53_RS11625	0.27	-1.0
2,589,419	+		LRK53_RS11625	0.27	-0.5
2,589,419	+		LRK53_RS11625	0.27	-0.2
2,589,419	+		LRK53_RS11625	0.27	+1.0
2,589,419	+		LRK53_RS11625	0.27	+1.0
2,589,419	+		LRK53_RS11625	0.27	-1.0
2,589,419	+		LRK53_RS11625	0.27	-0.0
2,589,419	+		LRK53_RS11625	0.27	-1.0
2,589,420	-		LRK53_RS11625	0.28	+0.8
2,589,420	-		LRK53_RS11625	0.28	-0.0
2,589,420	-		LRK53_RS11625	0.28	-0.6
2,589,420	-		LRK53_RS11625	0.28	-0.9
2,589,420	-		LRK53_RS11625	0.28	-1.3
2,589,420	-		LRK53_RS11625	0.28	+0.4