Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11330

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
2,525,564	-				-1.6
2,525,564	-				+1.0
2,525,564	-				-0.3
2,525,564	-				-1.2
2,525,564	-				-0.5
2,525,564	-				-0.0
2,525,564	-				-0.4
2,525,564	-				+0.5
2,525,564	-				-0.0
2,525,564	-				+2.0
2,525,602	-				-0.0
2,525,704	-		LRK53_RS11330	0.24	-0.6
2,525,704	-		LRK53_RS11330	0.24	-0.0
2,525,733	+		LRK53_RS11330	0.28	+1.0
2,525,733	+		LRK53_RS11330	0.28	-0.0
2,525,733	+		LRK53_RS11330	0.28	-0.6
2,525,733	+		LRK53_RS11330	0.28	-0.6
2,525,733	+		LRK53_RS11330	0.28	+1.0
2,525,733	+		LRK53_RS11330	0.28	+1.0
2,525,734	-		LRK53_RS11330	0.28	-0.6
2,525,735	+		LRK53_RS11330	0.28	-2.0
2,525,736	-		LRK53_RS11330	0.29	-1.6
2,526,081	-		LRK53_RS11330	0.79	-0.0
2,526,095	+		LRK53_RS11330	0.82	+1.0
2,526,269	+				-1.0
2,526,285	+				-1.6
2,526,285	+				-1.5
2,526,285	+				+0.6
2,526,285	+				-0.0
2,526,285	+				-1.8
2,526,285	+				-0.0
2,526,285	+				+1.0
2,526,285	+				-1.4
2,526,285	+				+0.8
2,526,285	+				-1.2
2,526,285	+				+0.2
2,526,285	+				+0.4
2,526,285	+				-1.2
2,526,285	+				-1.6
2,526,285	+				-1.0
2,526,285	+				+0.6
2,526,285	+				-0.6
2,526,286	-				-3.0
2,526,286	-				-1.5
2,526,286	-				+0.4
2,526,286	-				-1.1
2,526,286	-				-0.2
2,526,286	-				-1.0
2,526,286	-				-0.6
2,526,286	-				+2.0
2,526,286	-				-0.6
2,526,286	-				+1.0
2,526,286	-				-0.0
2,526,286	-				-0.6
2,526,286	-				-1.8
2,526,286	-				-0.6
2,526,286	-				-1.0
2,526,286	-				-0.6
2,526,289	+				-0.9
2,526,289	+				+2.6
2,526,290	-				+2.0
2,526,290	-				-1.4
2,526,290	-				-1.0
2,526,330	+				+1.0
2,526,330	+				-0.6
2,526,330	+				-0.6
2,526,330	+				-0.8
2,526,330	+				-1.4
2,526,330	+				-1.2
2,526,331	-				-0.0
2,526,331	-				-0.0
2,526,331	-				-1.4
2,526,331	-				-0.7
2,526,331	-				-0.8
2,526,421	+		LRK53_RS11335	0.35	-0.5
2,526,421	+		LRK53_RS11335	0.35	-1.7
2,526,430	+		LRK53_RS11335	0.38	+0.1
2,526,430	+		LRK53_RS11335	0.38	+0.4
2,526,431	-		LRK53_RS11335	0.39	-0.3
2,526,431	-		LRK53_RS11335	0.39	-0.3
2,526,431	-		LRK53_RS11335	0.39	-2.6
2,526,556	+		LRK53_RS11335	0.87	-2.0
2,526,556	+		LRK53_RS11335	0.87	-1.7
2,526,556	+		LRK53_RS11335	0.87	-0.6
2,526,556	+		LRK53_RS11335	0.87	+1.0
2,526,556	+		LRK53_RS11335	0.87	-1.4
2,526,557	-		LRK53_RS11335	0.88	+0.4
2,526,557	-		LRK53_RS11335	0.88	-0.9
2,526,571	+				-1.3
2,526,571	+				-0.0
2,526,571	+				-0.6
2,526,571	+				-1.6
2,526,572	-				-0.0
2,526,572	-				+1.0
2,526,649	+				-1.8
2,526,683	+				-0.4
2,526,683	+				-1.0
2,526,683	+				-0.0
2,526,785	+				-2.9
2,526,785	+				+1.0
2,526,785	+				-1.4
2,526,786	-				+1.0
2,526,790	+				-0.3
2,526,790	+				+1.0
2,526,790	+				-0.0
2,526,790	+				-0.6
2,526,790	+				-1.4
2,526,790	+				-0.6
2,526,791	-				-0.3
2,526,791	-				-1.5
2,526,791	-				-0.6
2,526,803	+				-0.0
2,526,803	+				+1.6
2,526,803	+				-1.6
2,526,803	+				+0.4
2,526,967	+		LRK53_RS11340	0.14	-0.6
2,526,967	+		LRK53_RS11340	0.14	+0.2
2,526,967	+		LRK53_RS11340	0.14	-1.6
2,526,967	+		LRK53_RS11340	0.14	-0.5
2,526,967	+		LRK53_RS11340	0.14	-0.5
2,526,967	+		LRK53_RS11340	0.14	+1.0
2,526,967	+		LRK53_RS11340	0.14	-0.9
2,526,967	+		LRK53_RS11340	0.14	-0.0
2,526,968	-		LRK53_RS11340	0.14	-0.1
2,526,968	-		LRK53_RS11340	0.14	+0.3
2,526,968	-		LRK53_RS11340	0.14	-0.0
2,526,968	-		LRK53_RS11340	0.14	-0.6
2,526,968	-		LRK53_RS11340	0.14	-1.0
2,526,968	-		LRK53_RS11340	0.14	-1.4
2,526,968	-		LRK53_RS11340	0.14	-1.0
2,526,968	-		LRK53_RS11340	0.14	+0.4
2,526,999	-		LRK53_RS11340	0.16	-2.2
2,527,005	-		LRK53_RS11340	0.16	-1.2
2,527,005	-		LRK53_RS11340	0.16	-1.0
2,527,175	+		LRK53_RS11340	0.25	+1.0
2,527,175	+		LRK53_RS11340	0.25	+1.0
2,527,175	+		LRK53_RS11340	0.25	-1.4
2,527,175	+		LRK53_RS11340	0.25	-1.0
2,527,175	+		LRK53_RS11340	0.25	-0.5
2,527,176	-		LRK53_RS11340	0.25	+0.6