Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08420

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,891,871	+				-0.6
1,891,872	-				+0.6
1,891,877	-				-0.6
1,891,877	-				+0.6
1,892,183	+				-0.6
1,892,183	+				+0.6
1,892,183	+				+1.0
1,892,183	+				-0.0
1,892,183	+				+0.6
1,892,183	+				+0.7
1,892,183	+				-0.1
1,892,183	+				-1.0
1,892,184	-				-1.0
1,892,184	-				-1.1
1,892,382	+		LRK53_RS08415	0.36	-0.3
1,892,382	+		LRK53_RS08415	0.36	+2.0
1,892,382	+		LRK53_RS08415	0.36	+0.4
1,892,382	+		LRK53_RS08415	0.36	-0.0
1,892,383	-		LRK53_RS08415	0.36	-1.0
1,892,383	-		LRK53_RS08415	0.36	+0.2
1,892,439	+		LRK53_RS08415	0.47	+1.0
1,892,439	+		LRK53_RS08415	0.47	-0.7
1,892,450	-		LRK53_RS08415	0.49	-1.0
1,892,450	-		LRK53_RS08415	0.49	-1.3
1,892,450	-		LRK53_RS08415	0.49	-0.1
1,892,558	+		LRK53_RS08415	0.72	-0.6
1,892,558	+		LRK53_RS08415	0.72	+0.4
1,892,558	+		LRK53_RS08415	0.72	-0.0
1,892,558	+		LRK53_RS08415	0.72	-0.7
1,892,730	+				-1.8
1,892,730	+				+1.0
1,892,731	-				-0.0
1,892,731	-				-1.6
1,892,731	-				-1.0
1,892,731	-				-0.6
1,892,731	-				-0.6
1,892,732	+				-2.3
1,892,732	+				-0.1
1,892,732	+				-0.2
1,892,732	+				-1.5
1,892,732	+				-0.0
1,892,732	+				+0.4
1,892,733	-				-1.3
1,892,733	-				-0.4
1,892,737	+				-1.3
1,892,737	+				-0.8
1,892,738	-				-1.3
1,892,738	-				-0.0
1,892,738	-				-0.0
1,892,738	-				+0.3
1,893,085	+		LRK53_RS08420	0.67	-0.6
1,893,085	+		LRK53_RS08420	0.67	+1.0
1,893,085	+		LRK53_RS08420	0.67	-0.0
1,893,085	+		LRK53_RS08420	0.67	-0.6
1,893,085	+		LRK53_RS08420	0.67	+0.3
1,893,085	+		LRK53_RS08420	0.67	+0.6
1,893,085	+		LRK53_RS08420	0.67	-0.0
1,893,085	+		LRK53_RS08420	0.67	-0.0
1,893,085	+		LRK53_RS08420	0.67	-1.2
1,893,085	+		LRK53_RS08420	0.67	-0.8
1,893,086	-		LRK53_RS08420	0.67	-1.3
1,893,086	-		LRK53_RS08420	0.67	+1.0
1,893,086	-		LRK53_RS08420	0.67	+0.4
1,893,086	-		LRK53_RS08420	0.67	-1.0
1,893,086	-		LRK53_RS08420	0.67	-1.0
1,893,086	-		LRK53_RS08420	0.67	-0.0
1,893,086	-		LRK53_RS08420	0.67	-1.8
1,893,086	-		LRK53_RS08420	0.67	-3.0
1,893,086	-		LRK53_RS08420	0.67	+1.0
1,893,086	-		LRK53_RS08420	0.67	-1.0
1,893,086	-		LRK53_RS08420	0.67	-0.8
1,893,086	-		LRK53_RS08420	0.67	-0.8
1,893,086	-		LRK53_RS08420	0.67	-0.9
1,893,086	-		LRK53_RS08420	0.67	-2.6
1,893,086	-		LRK53_RS08420	0.67	-1.8
1,893,086	-		LRK53_RS08420	0.67	-0.6
1,893,086	-		LRK53_RS08420	0.67	-0.2
1,893,086	-		LRK53_RS08420	0.67	-0.0
1,893,086	-		LRK53_RS08420	0.67	+1.0
1,893,086	-		LRK53_RS08420	0.67	-0.2
1,893,088	-		LRK53_RS08420	0.68	-0.0
1,893,088	-		LRK53_RS08420	0.68	-1.6
1,893,088	-		LRK53_RS08420	0.68	-0.0
1,893,275	+				-0.1
1,893,275	+				-0.6
1,893,275	+				-0.0
1,893,275	+				-2.2
1,893,275	+				-1.6
1,893,275	+				+0.4
1,893,276	-				+1.3
1,893,276	-				+0.5
1,893,276	-				-0.1
1,893,276	-				-0.6
1,893,387	+		LRK53_RS08425	0.11	+0.5
1,893,548	+		LRK53_RS08425	0.28	-0.6
1,893,548	+		LRK53_RS08425	0.28	-1.3
1,893,548	+		LRK53_RS08425	0.28	+1.0
1,893,549	-		LRK53_RS08425	0.28	-0.7
1,893,549	-		LRK53_RS08425	0.28	+0.7
1,893,549	-		LRK53_RS08425	0.28	-1.3
1,893,549	-		LRK53_RS08425	0.28	-2.1
1,893,549	-		LRK53_RS08425	0.28	+0.6
1,893,554	+		LRK53_RS08425	0.28	-2.3
1,893,626	+		LRK53_RS08425	0.36	-0.0
1,893,626	+		LRK53_RS08425	0.36	+0.4
1,893,727	+		LRK53_RS08425	0.47	-1.0
1,893,728	-		LRK53_RS08425	0.47	-2.0
1,893,728	-		LRK53_RS08425	0.47	+0.4