Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08350

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,875,592	+		LRK53_RS08345	0.23	+0.3
1,875,592	+		LRK53_RS08345	0.23	-0.3
1,875,592	+		LRK53_RS08345	0.23	-1.2
1,875,593	-		LRK53_RS08345	0.23	-0.3
1,875,593	-		LRK53_RS08345	0.23	-1.3
1,875,593	-		LRK53_RS08345	0.23	-0.0
1,875,619	+		LRK53_RS08345	0.26	-0.8
1,875,620	-		LRK53_RS08345	0.26	+0.1
1,875,620	-		LRK53_RS08345	0.26	-0.6
1,875,620	-		LRK53_RS08345	0.26	-0.0
1,875,620	-		LRK53_RS08345	0.26	+0.7
1,875,670	+		LRK53_RS08345	0.31	-0.0
1,875,670	+		LRK53_RS08345	0.31	-0.8
1,875,670	+		LRK53_RS08345	0.31	-1.6
1,875,671	-		LRK53_RS08345	0.31	-0.3
1,875,671	-		LRK53_RS08345	0.31	+2.6
1,875,671	-		LRK53_RS08345	0.31	-0.1
1,875,671	-		LRK53_RS08345	0.31	-1.6
1,875,671	-		LRK53_RS08345	0.31	-0.9
1,875,671	-		LRK53_RS08345	0.31	-2.0
1,875,671	-		LRK53_RS08345	0.31	-0.8
1,875,835	+		LRK53_RS08345	0.47	-0.3
1,875,835	+		LRK53_RS08345	0.47	-1.6
1,875,836	-		LRK53_RS08345	0.47	-1.7
1,875,836	-		LRK53_RS08345	0.47	-1.0
1,875,836	-		LRK53_RS08345	0.47	-0.6
1,875,836	-		LRK53_RS08345	0.47	-0.9
1,875,836	-		LRK53_RS08345	0.47	-0.7
1,875,836	-		LRK53_RS08345	0.47	-0.0
1,875,836	-		LRK53_RS08345	0.47	+2.0
1,875,910	+		LRK53_RS08345	0.55	+2.3
1,875,910	+		LRK53_RS08345	0.55	-1.0
1,875,910	+		LRK53_RS08345	0.55	-0.0
1,875,910	+		LRK53_RS08345	0.55	+2.0
1,875,910	+		LRK53_RS08345	0.55	-1.0
1,875,911	-		LRK53_RS08345	0.55	-2.7
1,876,054	+		LRK53_RS08345	0.69	-0.6
1,876,054	+		LRK53_RS08345	0.69	-0.9
1,876,054	+		LRK53_RS08345	0.69	-2.7
1,876,054	+		LRK53_RS08345	0.69	-0.0
1,876,054	+		LRK53_RS08345	0.69	-0.0
1,876,054	+		LRK53_RS08345	0.69	+1.0
1,876,054	+		LRK53_RS08345	0.69	-0.0
1,876,055	-		LRK53_RS08345	0.69	+0.4
1,876,055	-		LRK53_RS08345	0.69	-0.8
1,876,055	-		LRK53_RS08345	0.69	-0.0
1,876,055	-		LRK53_RS08345	0.69	-0.3
1,876,117	+		LRK53_RS08345	0.75	-0.6
1,876,117	+		LRK53_RS08345	0.75	-0.6
1,876,117	+		LRK53_RS08345	0.75	-1.6
1,876,117	+		LRK53_RS08345	0.75	-1.5
1,876,117	+		LRK53_RS08345	0.75	+0.8
1,876,117	+		LRK53_RS08345	0.75	-0.3
1,876,117	+		LRK53_RS08345	0.75	+0.4
1,876,117	+		LRK53_RS08345	0.75	-0.0
1,876,117	+		LRK53_RS08345	0.75	+0.3
1,876,117	+		LRK53_RS08345	0.75	-0.2
1,876,117	+		LRK53_RS08345	0.75	-1.3
1,876,118	-		LRK53_RS08345	0.75	-0.0
1,876,118	-		LRK53_RS08345	0.75	-1.8
1,876,118	-		LRK53_RS08345	0.75	-0.1
1,876,118	-		LRK53_RS08345	0.75	-1.0
1,876,118	-		LRK53_RS08345	0.75	-0.3
1,876,118	-		LRK53_RS08345	0.75	-1.0
1,876,118	-		LRK53_RS08345	0.75	+1.0
1,876,118	-		LRK53_RS08345	0.75	-1.8
1,876,118	-		LRK53_RS08345	0.75	-0.6
1,876,118	-		LRK53_RS08345	0.75	-1.0
1,876,118	-		LRK53_RS08345	0.75	+0.6
1,876,246	+		LRK53_RS08345	0.88	-0.6
1,876,246	+		LRK53_RS08345	0.88	-0.1
1,876,246	+		LRK53_RS08345	0.88	-0.5
1,876,246	+		LRK53_RS08345	0.88	+1.0
1,876,246	+		LRK53_RS08345	0.88	+1.1
1,876,247	-		LRK53_RS08345	0.88	-1.8
1,876,247	-		LRK53_RS08345	0.88	-0.1
1,876,247	-		LRK53_RS08345	0.88	+2.0
1,876,247	-		LRK53_RS08345	0.88	-0.0
1,876,247	-		LRK53_RS08345	0.88	-0.1
1,876,247	-		LRK53_RS08345	0.88	+0.4
1,876,247	-		LRK53_RS08345	0.88	-0.0
1,876,247	-		LRK53_RS08345	0.88	+0.4
1,876,249	+		LRK53_RS08345	0.88	-3.2
1,876,249	+		LRK53_RS08345	0.88	+1.0
1,876,249	+		LRK53_RS08345	0.88	-0.0
1,876,249	+		LRK53_RS08345	0.88	-1.2
1,876,249	+		LRK53_RS08345	0.88	-1.8
1,876,249	+		LRK53_RS08345	0.88	-1.0
1,876,249	+		LRK53_RS08345	0.88	-0.4
1,876,249	+		LRK53_RS08345	0.88	-0.6
1,876,249	+		LRK53_RS08345	0.88	-0.0
1,876,249	+		LRK53_RS08345	0.88	+0.4
1,876,249	+		LRK53_RS08345	0.88	-0.6
1,876,249	+		LRK53_RS08345	0.88	-1.2
1,876,250	-		LRK53_RS08345	0.88	-1.0
1,876,250	-		LRK53_RS08345	0.88	-1.6
1,876,250	-		LRK53_RS08345	0.88	-0.0
1,876,250	-		LRK53_RS08345	0.88	-1.0
1,876,250	-		LRK53_RS08345	0.88	-3.2
1,876,250	-		LRK53_RS08345	0.88	-1.3
1,876,250	-		LRK53_RS08345	0.88	-1.0
1,876,250	-		LRK53_RS08345	0.88	-0.5
1,876,250	-		LRK53_RS08345	0.88	+2.6
1,876,250	-		LRK53_RS08345	0.88	-0.8
1,876,250	-		LRK53_RS08345	0.88	-0.0
1,876,250	-		LRK53_RS08345	0.88	-1.2
1,876,250	-		LRK53_RS08345	0.88	-1.3
1,876,250	-		LRK53_RS08345	0.88	-1.5
1,876,250	-		LRK53_RS08345	0.88	-0.3
1,876,250	-		LRK53_RS08345	0.88	+1.0
1,876,361	-				-1.8
1,876,412	+				-1.6
1,876,413	-				+0.4
1,876,413	-				+1.0
1,876,413	-				+0.3
1,876,413	-				-0.0
1,876,447	+				-0.4
1,876,447	+				+1.0
1,876,447	+				-0.7
1,876,448	-				-1.0
1,876,448	-				-0.0
1,876,448	-				+0.4
1,876,525	+				-1.3
1,876,525	+				-1.3
1,876,525	+				+1.0
1,876,525	+				-0.8
1,876,525	+				-0.0
1,876,525	+				-0.6
1,876,525	+				-2.0
1,876,525	+				+0.4
1,876,525	+				-2.5
1,876,525	+				+1.0
1,876,525	+				-0.6
1,876,525	+				-0.1
1,876,525	+				-1.0
1,876,525	+				-1.1
1,876,525	+				+1.0
1,876,525	+				-0.3
1,876,525	+				-1.1
1,876,525	+				-1.5
1,876,525	+				+1.0
1,876,526	-				-1.6
1,876,526	-				-0.0
1,876,526	-				-0.3
1,876,526	-				-0.0
1,876,546	+				-2.5
1,876,547	-				+0.4
1,876,585	+				-0.6
1,876,598	-				-0.6
1,876,646	-				-0.0
1,876,705	+		LRK53_RS08350	0.15	-0.0
1,876,705	+		LRK53_RS08350	0.15	-0.3
1,876,706	-		LRK53_RS08350	0.15	+1.0
1,876,706	-		LRK53_RS08350	0.15	+1.0
1,876,730	-		LRK53_RS08350	0.17	+1.0
1,876,730	-		LRK53_RS08350	0.17	-0.0
1,876,801	-		LRK53_RS08350	0.23	-1.3
1,876,951	+		LRK53_RS08350	0.35	+1.0
1,876,952	-		LRK53_RS08350	0.35	+1.0
1,876,952	-		LRK53_RS08350	0.35	+1.0
1,876,952	-		LRK53_RS08350	0.35	+1.0
1,876,952	-		LRK53_RS08350	0.35	-1.2
1,877,110	+		LRK53_RS08350	0.48	+1.0
1,877,110	+		LRK53_RS08350	0.48	+1.0
1,877,111	-		LRK53_RS08350	0.48	-1.8
1,877,111	-		LRK53_RS08350	0.48	-0.0
1,877,111	-		LRK53_RS08350	0.48	+2.0
1,877,212	+		LRK53_RS08350	0.56	-0.6
1,877,213	-		LRK53_RS08350	0.57	-1.0
1,877,407	+		LRK53_RS08350	0.73	-1.3
1,877,407	+		LRK53_RS08350	0.73	-1.0
1,877,408	-		LRK53_RS08350	0.73	-0.6
1,877,524	+		LRK53_RS08350	0.82	+1.0
1,877,524	+		LRK53_RS08350	0.82	-1.3
1,877,525	-		LRK53_RS08350	0.82	-0.0
1,877,647	+				+1.0
1,877,735	+				-0.2
1,877,735	+				-0.6
1,877,735	+				+1.0
1,877,735	+				-0.0
1,877,735	+				-0.6
1,877,735	+				-0.6
1,877,735	+				-1.0
1,877,735	+				-1.6
1,877,735	+				+1.0
1,877,736	-				-1.0
1,877,736	-				-0.3
1,877,736	-				+1.0
1,877,736	-				+1.0
1,877,736	-				+0.3
1,877,736	-				-0.0
1,878,255	+		LRK53_RS08355	0.65	+1.0
1,878,258	+		LRK53_RS08355	0.65	-0.6
1,878,258	+		LRK53_RS08355	0.65	-0.9
1,878,258	+		LRK53_RS08355	0.65	+1.0
1,878,258	+		LRK53_RS08355	0.65	+1.0
1,878,258	+		LRK53_RS08355	0.65	+1.0