Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08005

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,797,351	+		LRK53_RS08000	0.64	+0.4
1,797,351	+		LRK53_RS08000	0.64	-1.8
1,797,351	+		LRK53_RS08000	0.64	-0.0
1,797,351	+		LRK53_RS08000	0.64	-0.0
1,797,351	+		LRK53_RS08000	0.64	+1.0
1,797,351	+		LRK53_RS08000	0.64	-0.8
1,797,351	+		LRK53_RS08000	0.64	+0.4
1,797,352	-		LRK53_RS08000	0.64	-0.2
1,797,352	-		LRK53_RS08000	0.64	-1.0
1,797,352	-		LRK53_RS08000	0.64	-0.6
1,797,395	+		LRK53_RS08000	0.66	-0.8
1,797,395	+		LRK53_RS08000	0.66	-3.1
1,797,395	+		LRK53_RS08000	0.66	+0.3
1,797,395	+		LRK53_RS08000	0.66	-0.7
1,797,395	+		LRK53_RS08000	0.66	-1.0
1,797,396	-		LRK53_RS08000	0.67	-0.0
1,797,396	-		LRK53_RS08000	0.67	-1.0
1,797,396	-		LRK53_RS08000	0.67	-0.9
1,797,396	-		LRK53_RS08000	0.67	+1.0
1,797,396	-		LRK53_RS08000	0.67	-1.0
1,797,396	-		LRK53_RS08000	0.67	+1.0
1,797,396	-		LRK53_RS08000	0.67	+1.0
1,797,462	+		LRK53_RS08000	0.70	-0.3
1,797,463	-		LRK53_RS08000	0.70	+1.0
1,797,463	-		LRK53_RS08000	0.70	+0.9
1,797,463	-		LRK53_RS08000	0.70	-0.0
1,797,463	-		LRK53_RS08000	0.70	-0.6
1,797,463	-		LRK53_RS08000	0.70	-0.7
1,797,563	+		LRK53_RS08000	0.76	-0.1
1,797,563	+		LRK53_RS08000	0.76	-1.1
1,797,675	+		LRK53_RS08000	0.83	-1.8
1,797,675	+		LRK53_RS08000	0.83	-0.6
1,797,675	+		LRK53_RS08000	0.83	-1.5
1,797,676	-		LRK53_RS08000	0.83	+1.7
1,797,676	-		LRK53_RS08000	0.83	-0.7
1,797,805	-				-0.0
1,797,805	-				-1.8
1,797,805	-				+0.3
1,797,805	-				-0.8
1,798,125	+				-0.0
1,798,130	+				+1.0
1,798,130	+				-1.3
1,798,130	+				+1.0
1,798,130	+				-1.1
1,798,131	-				-1.5
1,798,131	-				-0.5
1,798,286	+				-0.0
1,798,286	+				+0.3
1,798,286	+				+1.0
1,798,286	+				+0.2
1,798,286	+				-1.5
1,798,286	+				+0.4
1,798,286	+				-0.1
1,798,286	+				+0.4
1,798,286	+				-0.6
1,798,286	+				+0.7
1,798,286	+				-0.5
1,798,286	+				-0.6
1,798,286	+				-0.8
1,798,287	-				-0.0
1,798,287	-				-0.5
1,798,287	-				-0.5
1,798,287	-				+1.0
1,798,287	-				+0.2
1,798,287	-				-0.0
1,798,287	-				-0.6
1,798,287	-				+1.0
1,798,287	-				+0.3
1,798,287	-				+1.0
1,798,287	-				-0.8
1,798,287	-				-0.6
1,798,287	-				+0.4
1,798,287	-				-0.5
1,798,287	-				-0.6
1,798,287	-				-2.8
1,798,314	+				-1.0
1,798,315	-				+1.2
1,798,315	-				-0.7
1,798,459	+				+1.0
1,798,459	+				-2.0
1,798,459	+				+1.4
1,798,459	+				+0.4
1,798,459	+				-1.6
1,798,459	+				-0.6
1,798,459	+				-1.0
1,798,459	+				-0.0
1,798,459	+				-1.0
1,798,459	+				+1.0
1,798,459	+				-1.6
1,798,459	+				-1.6
1,798,460	-				-0.8
1,798,460	-				+1.0
1,798,460	-				-1.0
1,798,460	-				-0.2
1,798,460	-				+0.4
1,798,460	-				-1.0
1,798,460	-				+0.4
1,798,460	-				-1.3
1,798,460	-				-0.6
1,798,460	-				-1.8
1,798,460	-				-1.0
1,798,460	-				-0.0
1,798,460	-				-1.3
1,798,460	-				-1.0
1,798,460	-				-1.0
1,798,460	-				-1.0
1,798,461	+				-0.7
1,798,462	-				+1.0
1,798,462	-				-0.0
1,798,462	-				-0.9
1,798,711	+		LRK53_RS08005	0.10	-0.2
1,798,711	+		LRK53_RS08005	0.10	+1.0
1,798,712	-		LRK53_RS08005	0.10	-0.5
1,798,712	-		LRK53_RS08005	0.10	+1.0
1,798,744	+		LRK53_RS08005	0.11	+0.1
1,798,744	+		LRK53_RS08005	0.11	-0.0
1,798,745	-		LRK53_RS08005	0.11	-2.2
1,798,745	-		LRK53_RS08005	0.11	+1.0
1,798,745	-		LRK53_RS08005	0.11	-2.1
1,798,745	-		LRK53_RS08005	0.11	-1.3
1,798,867	+		LRK53_RS08005	0.15	-1.0
1,798,867	+		LRK53_RS08005	0.15	+2.6
1,798,867	+		LRK53_RS08005	0.15	-0.0
1,798,867	+		LRK53_RS08005	0.15	-1.3
1,798,868	-		LRK53_RS08005	0.15	-1.3
1,798,868	-		LRK53_RS08005	0.15	-2.0
1,799,053	+		LRK53_RS08005	0.20	+0.4
1,799,053	+		LRK53_RS08005	0.20	-1.6
1,799,053	+		LRK53_RS08005	0.20	-0.7
1,799,053	+		LRK53_RS08005	0.20	-0.6
1,799,054	-		LRK53_RS08005	0.20	-1.0
1,799,054	-		LRK53_RS08005	0.20	-0.0
1,799,054	-		LRK53_RS08005	0.20	-2.5
1,799,054	-		LRK53_RS08005	0.20	-1.6
1,799,054	-		LRK53_RS08005	0.20	-1.6
1,799,059	+		LRK53_RS08005	0.20	-0.0
1,799,059	+		LRK53_RS08005	0.20	+1.0
1,799,059	+		LRK53_RS08005	0.20	-0.0
1,799,060	-		LRK53_RS08005	0.20	-0.2
1,799,060	-		LRK53_RS08005	0.20	-1.2
1,799,353	+		LRK53_RS08005	0.28	-1.1
1,799,353	+		LRK53_RS08005	0.28	+1.0
1,799,354	-		LRK53_RS08005	0.28	+1.0
1,799,354	-		LRK53_RS08005	0.28	-0.3
1,799,354	-		LRK53_RS08005	0.28	+0.4
1,800,108	+		LRK53_RS08005	0.49	+1.0
1,800,109	-		LRK53_RS08005	0.49	-0.3
1,800,197	-		LRK53_RS08005	0.52	+0.3
1,800,232	+		LRK53_RS08005	0.53	-1.6
1,800,232	+		LRK53_RS08005	0.53	+1.0
1,800,233	-		LRK53_RS08005	0.53	+2.6
1,800,233	-		LRK53_RS08005	0.53	-1.0
1,800,233	-		LRK53_RS08005	0.53	-2.2
1,800,233	-		LRK53_RS08005	0.53	-1.0
1,800,233	-		LRK53_RS08005	0.53	-0.5
1,800,233	-		LRK53_RS08005	0.53	-0.3
1,800,233	-		LRK53_RS08005	0.53	-3.0
1,800,233	-		LRK53_RS08005	0.53	-1.2
1,800,233	-		LRK53_RS08005	0.53	+2.0
1,800,254	-		LRK53_RS08005	0.53	+1.0
1,800,254	-		LRK53_RS08005	0.53	-2.0
1,800,451	+		LRK53_RS08005	0.59	-1.8
1,800,451	+		LRK53_RS08005	0.59	-0.7
1,800,452	-		LRK53_RS08005	0.59	-0.0
1,800,452	-		LRK53_RS08005	0.59	-0.6
1,800,452	-		LRK53_RS08005	0.59	+1.0
1,800,452	-		LRK53_RS08005	0.59	-1.0
1,800,827	+		LRK53_RS08005	0.69	+1.0
1,800,827	+		LRK53_RS08005	0.69	-1.3
1,800,827	+		LRK53_RS08005	0.69	-0.6
1,800,970	+		LRK53_RS08005	0.73	-1.3
1,800,970	+		LRK53_RS08005	0.73	-2.7
1,800,970	+		LRK53_RS08005	0.73	-0.8
1,800,970	+		LRK53_RS08005	0.73	-1.6
1,800,970	+		LRK53_RS08005	0.73	-0.0
1,800,970	+		LRK53_RS08005	0.73	-1.4
1,800,970	+		LRK53_RS08005	0.73	-0.0
1,800,970	+		LRK53_RS08005	0.73	-0.0
1,800,971	-		LRK53_RS08005	0.73	-0.6
1,800,971	-		LRK53_RS08005	0.73	-1.6
1,800,971	-		LRK53_RS08005	0.73	-1.1
1,800,971	-		LRK53_RS08005	0.73	+1.0
1,801,024	+		LRK53_RS08005	0.75	-1.8
1,801,024	+		LRK53_RS08005	0.75	+0.5
1,801,108	+		LRK53_RS08005	0.77	-1.0
1,801,109	-		LRK53_RS08005	0.77	+0.6
1,801,109	-		LRK53_RS08005	0.77	-0.6
1,801,109	-		LRK53_RS08005	0.77	+0.3
1,801,109	-		LRK53_RS08005	0.77	-1.6
1,801,109	-		LRK53_RS08005	0.77	-0.6
1,801,150	+		LRK53_RS08005	0.78	-0.3
1,801,150	+		LRK53_RS08005	0.78	+1.0
1,801,150	+		LRK53_RS08005	0.78	+1.0
1,801,150	+		LRK53_RS08005	0.78	+1.0
1,801,150	+		LRK53_RS08005	0.78	-1.3
1,801,150	+		LRK53_RS08005	0.78	-0.0
1,801,150	+		LRK53_RS08005	0.78	-0.6
1,801,150	+		LRK53_RS08005	0.78	+1.0
1,801,150	+		LRK53_RS08005	0.78	+2.0
1,801,151	-		LRK53_RS08005	0.78	-1.3
1,801,151	-		LRK53_RS08005	0.78	-0.0
1,801,151	-		LRK53_RS08005	0.78	-0.5
1,801,151	-		LRK53_RS08005	0.78	-0.0
1,801,151	-		LRK53_RS08005	0.78	-0.0
1,801,151	-		LRK53_RS08005	0.78	-0.8
1,801,151	-		LRK53_RS08005	0.78	-0.4
1,801,151	-		LRK53_RS08005	0.78	+1.0
1,801,151	-		LRK53_RS08005	0.78	-0.0
1,801,153	+		LRK53_RS08005	0.78	-0.6
1,801,153	+		LRK53_RS08005	0.78	-1.3
1,801,153	+		LRK53_RS08005	0.78	-1.0
1,801,153	+		LRK53_RS08005	0.78	-1.8
1,801,153	+		LRK53_RS08005	0.78	-1.3
1,801,154	-		LRK53_RS08005	0.78	+0.4
1,801,154	-		LRK53_RS08005	0.78	-0.6
1,801,195	+		LRK53_RS08005	0.79	-0.0
1,801,196	-		LRK53_RS08005	0.79	-1.6
1,801,580	+				-2.0
1,801,580	+				-0.3
1,801,580	+				+1.0
1,801,580	+				-0.6
1,801,580	+				+1.0
1,801,581	-				-2.2
1,801,581	-				-1.6
1,801,581	-				-1.0
1,801,581	-				-2.2
1,801,581	-				-1.0
1,801,581	-				-1.7
1,801,581	-				-1.3
1,801,581	-				-0.6
1,801,581	-				-1.6
1,801,581	-				-1.0
1,801,642	+				-0.0
1,801,642	+				-0.5
1,801,642	+				-1.0
1,801,642	+				-2.0
1,801,642	+				-0.2
1,801,643	-				-0.5
1,801,643	-				-1.6
1,801,643	-				+1.0
1,801,697	-				+1.0
1,801,934	+				-0.3
1,801,935	-				-0.0
1,801,935	-				-1.8
1,801,935	-				-1.3
1,801,935	-				-0.0
1,801,935	-				+1.0
1,801,947	+				-0.0
1,801,947	+				-0.8
1,801,947	+				-0.0
1,801,948	-				-0.0
1,801,948	-				-0.3
1,801,948	-				-0.8
1,801,994	+				-1.2
1,801,994	+				-1.3
1,801,994	+				+1.0
1,801,994	+				-0.3
1,801,994	+				+2.0
1,801,995	-				-1.3
1,801,995	-				+1.0
1,801,995	-				-1.3
1,801,995	-				-0.3
1,802,102	+		LRK53_RS08010	0.18	+0.3
1,802,102	+		LRK53_RS08010	0.18	+0.4
1,802,102	+		LRK53_RS08010	0.18	+0.4
1,802,102	+		LRK53_RS08010	0.18	-0.0
1,802,102	+		LRK53_RS08010	0.18	-1.5
1,802,102	+		LRK53_RS08010	0.18	-0.0
1,802,103	-		LRK53_RS08010	0.18	-1.2
1,802,103	-		LRK53_RS08010	0.18	-0.4
1,802,103	-		LRK53_RS08010	0.18	-0.2
1,802,103	-		LRK53_RS08010	0.18	-1.0
1,802,103	-		LRK53_RS08010	0.18	+0.4
1,802,103	-		LRK53_RS08010	0.18	+1.0
1,802,103	-		LRK53_RS08010	0.18	+1.0
1,802,157	+		LRK53_RS08010	0.27	+0.2
1,802,157	+		LRK53_RS08010	0.27	+1.0
1,802,157	+		LRK53_RS08010	0.27	+0.4
1,802,157	+		LRK53_RS08010	0.27	-0.6
1,802,157	+		LRK53_RS08010	0.27	+0.5
1,802,157	+		LRK53_RS08010	0.27	+0.4
1,802,157	+		LRK53_RS08010	0.27	-0.4
1,802,158	-		LRK53_RS08010	0.27	-0.9
1,802,158	-		LRK53_RS08010	0.27	-0.7
1,802,158	-		LRK53_RS08010	0.27	+2.6
1,802,158	-		LRK53_RS08010	0.27	+1.0
1,802,158	-		LRK53_RS08010	0.27	+1.0
1,802,158	-		LRK53_RS08010	0.27	-0.0
1,802,158	-		LRK53_RS08010	0.27	-1.0
1,802,158	-		LRK53_RS08010	0.27	-0.6
1,802,158	-		LRK53_RS08010	0.27	-0.2
1,802,240	+		LRK53_RS08010	0.41	-0.3
1,802,240	+		LRK53_RS08010	0.41	-1.0
1,802,240	+		LRK53_RS08010	0.41	-0.4
1,802,240	+		LRK53_RS08010	0.41	-1.5
1,802,240	+		LRK53_RS08010	0.41	-0.6
1,802,240	+		LRK53_RS08010	0.41	+1.0
1,802,240	+		LRK53_RS08010	0.41	-0.0
1,802,240	+		LRK53_RS08010	0.41	-0.0
1,802,240	+		LRK53_RS08010	0.41	-1.8
1,802,240	+		LRK53_RS08010	0.41	-2.0
1,802,240	+		LRK53_RS08010	0.41	-0.8
1,802,240	+		LRK53_RS08010	0.41	-1.2
1,802,240	+		LRK53_RS08010	0.41	+0.2
1,802,240	+		LRK53_RS08010	0.41	-0.0
1,802,240	+		LRK53_RS08010	0.41	-1.2
1,802,240	+		LRK53_RS08010	0.41	-0.0
1,802,240	+		LRK53_RS08010	0.41	-1.3
1,802,240	+		LRK53_RS08010	0.41	-0.5
1,802,240	+		LRK53_RS08010	0.41	-0.5
1,802,240	+		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	+0.1
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	-0.7
1,802,241	-		LRK53_RS08010	0.41	-1.1
1,802,241	-		LRK53_RS08010	0.41	-0.0
1,802,241	-		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	-1.8
1,802,241	-		LRK53_RS08010	0.41	+0.7
1,802,241	-		LRK53_RS08010	0.41	-1.5
1,802,241	-		LRK53_RS08010	0.41	-1.3
1,802,241	-		LRK53_RS08010	0.41	-0.8
1,802,241	-		LRK53_RS08010	0.41	-0.8
1,802,241	-		LRK53_RS08010	0.41	-1.0
1,802,241	-		LRK53_RS08010	0.41	-0.9
1,802,241	-		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	+0.5
1,802,241	-		LRK53_RS08010	0.41	-0.0
1,802,241	-		LRK53_RS08010	0.41	-2.1
1,802,241	-		LRK53_RS08010	0.41	+0.2
1,802,241	-		LRK53_RS08010	0.41	-1.0
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	-0.8
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	-1.6
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	+1.0
1,802,241	-		LRK53_RS08010	0.41	-1.7
1,802,241	-		LRK53_RS08010	0.41	-0.3
1,802,241	-		LRK53_RS08010	0.41	-1.0
1,802,241	-		LRK53_RS08010	0.41	-1.3
1,802,241	-		LRK53_RS08010	0.41	+0.4
1,802,241	-		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	-0.0
1,802,241	-		LRK53_RS08010	0.41	+0.6
1,802,241	-		LRK53_RS08010	0.41	+1.0
1,802,241	-		LRK53_RS08010	0.41	-0.6
1,802,241	-		LRK53_RS08010	0.41	-0.0
1,802,241	-		LRK53_RS08010	0.41	-0.0
1,802,241	-		LRK53_RS08010	0.41	-1.3
1,802,241	-		LRK53_RS08010	0.41	+1.0
1,802,241	-		LRK53_RS08010	0.41	-1.0
1,802,241	-		LRK53_RS08010	0.41	-0.5
1,802,244	+		LRK53_RS08010	0.41	+0.7
1,802,244	+		LRK53_RS08010	0.41	-0.5
1,802,244	+		LRK53_RS08010	0.41	-1.0
1,802,244	+		LRK53_RS08010	0.41	-0.6
1,802,244	+		LRK53_RS08010	0.41	-1.5
1,802,244	+		LRK53_RS08010	0.41	-1.0
1,802,244	+		LRK53_RS08010	0.41	-0.9
1,802,244	+		LRK53_RS08010	0.41	+2.0
1,802,244	+		LRK53_RS08010	0.41	-2.2
1,802,244	+		LRK53_RS08010	0.41	+0.4
1,802,244	+		LRK53_RS08010	0.41	-0.0
1,802,244	+		LRK53_RS08010	0.41	-0.6
1,802,245	-		LRK53_RS08010	0.42	-1.6
1,802,245	-		LRK53_RS08010	0.42	-1.7
1,802,245	-		LRK53_RS08010	0.42	-1.0
1,802,245	-		LRK53_RS08010	0.42	-0.0
1,802,245	-		LRK53_RS08010	0.42	-0.3
1,802,245	-		LRK53_RS08010	0.42	+0.2
1,802,245	-		LRK53_RS08010	0.42	-0.4
1,802,297	+		LRK53_RS08010	0.50	-0.0
1,802,297	+		LRK53_RS08010	0.50	+1.0
1,802,297	+		LRK53_RS08010	0.50	-0.0
1,802,297	+		LRK53_RS08010	0.50	+0.3
1,802,297	+		LRK53_RS08010	0.50	-0.2
1,802,297	+		LRK53_RS08010	0.50	-0.0
1,802,297	+		LRK53_RS08010	0.50	-2.7
1,802,297	+		LRK53_RS08010	0.50	+0.3
1,802,297	+		LRK53_RS08010	0.50	-0.3
1,802,297	+		LRK53_RS08010	0.50	+0.5
1,802,297	+		LRK53_RS08010	0.50	-1.3
1,802,298	-		LRK53_RS08010	0.50	+0.4
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	-1.0
1,802,298	-		LRK53_RS08010	0.50	+0.4
1,802,298	-		LRK53_RS08010	0.50	-1.6
1,802,298	-		LRK53_RS08010	0.50	-1.0
1,802,298	-		LRK53_RS08010	0.50	-1.0
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	+1.0
1,802,298	-		LRK53_RS08010	0.50	-0.2
1,802,298	-		LRK53_RS08010	0.50	-1.0
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	-0.6
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	-1.5
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	-0.0
1,802,298	-		LRK53_RS08010	0.50	-0.3
1,802,482	-		LRK53_RS08010	0.81	+0.2
1,802,610	-				-0.3
1,802,620	-				-0.6
1,802,698	-				-1.0
1,802,698	-				-1.3
1,802,720	-				+0.2
1,802,729	+				+0.3
1,802,729	+				-1.3
1,802,877	+		LRK53_RS08015	0.20	+1.0