Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07945

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,779,102	+		LRK53_RS07940	0.66	-1.1
1,779,102	+		LRK53_RS07940	0.66	+0.4
1,779,102	+		LRK53_RS07940	0.66	-1.5
1,779,102	+		LRK53_RS07940	0.66	+0.4
1,779,102	+		LRK53_RS07940	0.66	-1.0
1,779,102	+		LRK53_RS07940	0.66	-1.0
1,779,102	+		LRK53_RS07940	0.66	+0.3
1,779,102	+		LRK53_RS07940	0.66	+0.0
1,779,103	-		LRK53_RS07940	0.66	+2.0
1,779,103	-		LRK53_RS07940	0.66	+1.0
1,779,103	-		LRK53_RS07940	0.66	-1.0
1,779,103	-		LRK53_RS07940	0.66	+1.6
1,779,103	-		LRK53_RS07940	0.66	-0.4
1,779,103	-		LRK53_RS07940	0.66	-0.6
1,779,103	-		LRK53_RS07940	0.66	-1.0
1,779,103	-		LRK53_RS07940	0.66	-0.6
1,779,236	+		LRK53_RS07940	0.77	-1.0
1,779,236	+		LRK53_RS07940	0.77	+1.0
1,779,236	+		LRK53_RS07940	0.77	-1.1
1,779,236	+		LRK53_RS07940	0.77	+1.0
1,779,236	+		LRK53_RS07940	0.77	-1.2
1,779,236	+		LRK53_RS07940	0.77	+1.3
1,779,236	+		LRK53_RS07940	0.77	+0.4
1,779,236	+		LRK53_RS07940	0.77	-1.8
1,779,236	+		LRK53_RS07940	0.77	-0.1
1,779,236	+		LRK53_RS07940	0.77	-0.2
1,779,236	+		LRK53_RS07940	0.77	-0.2
1,779,236	+		LRK53_RS07940	0.77	-0.4
1,779,236	+		LRK53_RS07940	0.77	+0.0
1,779,237	-		LRK53_RS07940	0.77	-1.5
1,779,237	-		LRK53_RS07940	0.77	-2.5
1,779,237	-		LRK53_RS07940	0.77	-0.6
1,779,237	-		LRK53_RS07940	0.77	-0.4
1,779,237	-		LRK53_RS07940	0.77	-0.4
1,779,237	-		LRK53_RS07940	0.77	+0.0
1,779,237	-		LRK53_RS07940	0.77	-1.0
1,779,237	-		LRK53_RS07940	0.77	+1.0
1,779,237	-		LRK53_RS07940	0.77	+0.0
1,779,270	+		LRK53_RS07940	0.80	-0.8
1,779,270	+		LRK53_RS07940	0.80	+1.0
1,779,325	-		LRK53_RS07940	0.85	+0.1
1,779,325	-		LRK53_RS07940	0.85	-1.1
1,779,570	-				+0.3
1,779,578	+				-0.6
1,779,578	+				+0.4
1,779,579	-				-0.3
1,779,579	-				+0.1
1,779,579	-				+0.5
1,779,579	-				+0.3
1,779,579	-				+0.0
1,779,609	+				+1.0
1,779,609	+				+0.3
1,779,609	+				-1.1
1,779,609	+				-1.0
1,779,609	+				+0.0
1,779,609	+				+0.3
1,779,609	+				-0.2
1,779,609	+				+1.3
1,779,609	+				+1.0
1,779,609	+				-0.6
1,779,609	+				+1.0
1,779,609	+				+1.0
1,779,609	+				-0.6
1,779,609	+				-0.6
1,779,609	+				+1.0
1,779,609	+				+0.4
1,779,610	-				-3.9
1,779,610	-				-0.2
1,779,610	-				-1.2
1,779,610	-				+0.4
1,779,610	-				-1.1
1,779,610	-				+1.3
1,779,610	-				-1.0
1,779,610	-				+0.4
1,779,610	-				-1.2
1,779,610	-				-0.4
1,779,610	-				-1.0
1,779,610	-				-0.6
1,779,610	-				+0.1
1,779,610	-				-1.2
1,779,610	-				-1.3
1,779,610	-				-0.3
1,779,692	+				+1.0
1,779,692	+				-1.3
1,779,693	-				-1.3
1,779,693	-				+0.4
1,779,693	-				-0.5
1,779,693	-				-0.9
1,779,693	-				-1.6
1,779,693	-				+0.0
1,779,693	-				-0.9
1,779,694	+				+0.3
1,779,714	-				-0.4
1,779,961	+				-1.0
1,779,961	+				-0.6
1,779,961	+				+1.0
1,779,962	-				+1.0
1,779,962	-				-0.6
1,779,962	-				-1.6
1,779,962	-				-0.2
1,779,977	+				-0.6
1,779,977	+				+0.2
1,779,977	+				-0.6
1,779,977	+				+1.0
1,779,977	+				+1.0
1,779,977	+				-1.2
1,779,977	+				+0.7
1,779,977	+				-0.9
1,779,977	+				-1.0
1,779,977	+				-0.3
1,779,977	+				-0.3
1,779,977	+				-2.5
1,779,977	+				-0.6
1,779,977	+				-1.8
1,779,978	-				-1.8
1,779,978	-				-0.7
1,779,978	-				-1.6
1,779,978	-				+0.0
1,779,978	-				-1.3
1,779,978	-				-1.0
1,779,978	-				-1.9
1,779,978	-				-1.9
1,779,979	+				+0.6
1,779,980	-				+0.6
1,779,980	-				-1.8
1,779,980	-				+1.0
1,779,980	-				+1.0
1,779,980	-				-1.0
1,780,065	+				-0.2
1,780,065	+				-1.8
1,780,065	+				+2.0
1,780,065	+				-0.3
1,780,065	+				-1.8
1,780,066	-				-0.6
1,780,066	-				-1.0
1,780,066	-				-1.0
1,780,066	-				-2.3
1,780,066	-				+0.4
1,780,066	-				+1.0
1,780,068	+				+1.0
1,780,068	+				-1.0
1,780,068	+				-2.0
1,780,068	+				+1.0
1,780,068	+				-1.3
1,780,068	+				+1.0
1,780,069	-				-1.3
1,780,715	+		LRK53_RS07945	0.14	-1.8
1,780,716	-		LRK53_RS07945	0.14	-0.6
1,780,916	+		LRK53_RS07945	0.18	-0.3
1,780,916	+		LRK53_RS07945	0.18	-2.2
1,780,916	+		LRK53_RS07945	0.18	-0.8
1,780,916	+		LRK53_RS07945	0.18	-0.8
1,780,917	-		LRK53_RS07945	0.18	-0.9
1,780,917	-		LRK53_RS07945	0.18	+0.0
1,780,917	-		LRK53_RS07945	0.18	-0.3
1,780,925	+		LRK53_RS07945	0.18	-1.6
1,780,925	+		LRK53_RS07945	0.18	+0.4
1,780,925	+		LRK53_RS07945	0.18	+0.4
1,780,925	+		LRK53_RS07945	0.18	+1.0
1,780,925	+		LRK53_RS07945	0.18	+0.0
1,780,925	+		LRK53_RS07945	0.18	-2.2
1,780,925	+		LRK53_RS07945	0.18	-1.6
1,780,925	+		LRK53_RS07945	0.18	-0.6
1,780,926	-		LRK53_RS07945	0.18	-0.8
1,780,926	-		LRK53_RS07945	0.18	+1.0
1,780,926	-		LRK53_RS07945	0.18	+1.0
1,780,926	-		LRK53_RS07945	0.18	+0.0
1,780,926	-		LRK53_RS07945	0.18	-1.3
1,780,926	-		LRK53_RS07945	0.18	+0.8
1,780,926	-		LRK53_RS07945	0.18	-1.3
1,780,926	-		LRK53_RS07945	0.18	+0.0
1,780,926	-		LRK53_RS07945	0.18	+0.0
1,780,926	-		LRK53_RS07945	0.18	+0.0
1,781,006	+		LRK53_RS07945	0.20	-1.3
1,781,006	+		LRK53_RS07945	0.20	-1.3
1,781,006	+		LRK53_RS07945	0.20	-1.3
1,781,006	+		LRK53_RS07945	0.20	-1.0
1,781,006	+		LRK53_RS07945	0.20	-1.8
1,781,006	+		LRK53_RS07945	0.20	+0.0
1,781,006	+		LRK53_RS07945	0.20	-0.3
1,781,006	+		LRK53_RS07945	0.20	+0.0
1,781,006	+		LRK53_RS07945	0.20	-0.6
1,781,007	-		LRK53_RS07945	0.20	-1.0
1,781,007	-		LRK53_RS07945	0.20	-1.0
1,781,007	-		LRK53_RS07945	0.20	-2.2
1,781,007	-		LRK53_RS07945	0.20	+0.0
1,781,007	-		LRK53_RS07945	0.20	+0.4
1,781,007	-		LRK53_RS07945	0.20	-0.6
1,781,007	-		LRK53_RS07945	0.20	-1.3
1,781,007	-		LRK53_RS07945	0.20	+1.0
1,781,007	-		LRK53_RS07945	0.20	+0.0
1,781,007	-		LRK53_RS07945	0.20	+0.0
1,781,007	-		LRK53_RS07945	0.20	-1.6
1,781,090	+		LRK53_RS07945	0.22	+1.0
1,781,090	+		LRK53_RS07945	0.22	+0.0
1,781,090	+		LRK53_RS07945	0.22	+0.7
1,781,090	+		LRK53_RS07945	0.22	+0.0
1,781,090	+		LRK53_RS07945	0.22	-0.6
1,781,090	+		LRK53_RS07945	0.22	-1.0
1,781,091	-		LRK53_RS07945	0.22	+2.0
1,781,091	-		LRK53_RS07945	0.22	-1.0
1,781,091	-		LRK53_RS07945	0.22	+0.0
1,781,091	-		LRK53_RS07945	0.22	+1.0
1,781,241	-		LRK53_RS07945	0.25	-1.3
1,781,241	-		LRK53_RS07945	0.25	-0.3
1,781,432	+		LRK53_RS07945	0.29	-0.2
1,781,432	+		LRK53_RS07945	0.29	-0.6
1,781,432	+		LRK53_RS07945	0.29	-1.0
1,781,432	+		LRK53_RS07945	0.29	+1.0
1,781,432	+		LRK53_RS07945	0.29	-1.3
1,781,433	-		LRK53_RS07945	0.29	-0.3
1,781,433	-		LRK53_RS07945	0.29	-1.0
1,781,433	-		LRK53_RS07945	0.29	+1.0
1,781,576	+		LRK53_RS07945	0.32	+0.0
1,781,576	+		LRK53_RS07945	0.32	+0.0
1,781,576	+		LRK53_RS07945	0.32	-1.0
1,781,576	+		LRK53_RS07945	0.32	+0.5
1,781,576	+		LRK53_RS07945	0.32	-1.3
1,781,577	-		LRK53_RS07945	0.32	+2.0
1,781,577	-		LRK53_RS07945	0.32	-0.8
1,781,577	-		LRK53_RS07945	0.32	+0.0
1,781,618	+		LRK53_RS07945	0.32	-0.6
1,781,618	+		LRK53_RS07945	0.32	-1.2
1,781,618	+		LRK53_RS07945	0.32	-0.8
1,781,618	+		LRK53_RS07945	0.32	+1.0
1,781,618	+		LRK53_RS07945	0.32	-1.2
1,781,618	+		LRK53_RS07945	0.32	+1.0
1,781,618	+		LRK53_RS07945	0.32	-1.8
1,781,618	+		LRK53_RS07945	0.32	-1.7
1,781,618	+		LRK53_RS07945	0.32	-0.3
1,781,618	+		LRK53_RS07945	0.32	-0.6
1,781,618	+		LRK53_RS07945	0.32	-0.6
1,781,619	-		LRK53_RS07945	0.32	-0.6
1,781,619	-		LRK53_RS07945	0.32	-0.6
1,781,619	-		LRK53_RS07945	0.32	-1.6
1,781,619	-		LRK53_RS07945	0.32	-1.0
1,781,619	-		LRK53_RS07945	0.32	-1.6
1,781,619	-		LRK53_RS07945	0.32	-1.6
1,781,619	-		LRK53_RS07945	0.32	+0.0
1,781,666	+		LRK53_RS07945	0.33	-1.0
1,781,666	+		LRK53_RS07945	0.33	-0.2
1,781,666	+		LRK53_RS07945	0.33	+0.0
1,781,666	+		LRK53_RS07945	0.33	+1.0
1,781,666	+		LRK53_RS07945	0.33	+0.0
1,781,666	+		LRK53_RS07945	0.33	+0.0
1,781,666	+		LRK53_RS07945	0.33	-2.2
1,781,666	+		LRK53_RS07945	0.33	-1.8
1,781,666	+		LRK53_RS07945	0.33	-2.0
1,781,667	-		LRK53_RS07945	0.33	-1.3
1,781,667	-		LRK53_RS07945	0.33	+2.6
1,781,667	-		LRK53_RS07945	0.33	+1.3
1,781,667	-		LRK53_RS07945	0.33	+2.0
1,781,667	-		LRK53_RS07945	0.33	+1.0
1,781,667	-		LRK53_RS07945	0.33	+2.0
1,781,667	-		LRK53_RS07945	0.33	+1.0
1,781,667	-		LRK53_RS07945	0.33	+1.0
1,781,708	+		LRK53_RS07945	0.34	-0.6
1,781,709	-		LRK53_RS07945	0.34	-1.0
1,781,709	-		LRK53_RS07945	0.34	-2.4
1,781,709	-		LRK53_RS07945	0.34	+0.0
1,781,709	-		LRK53_RS07945	0.34	-1.0
1,781,709	-		LRK53_RS07945	0.34	+0.0
1,781,792	+		LRK53_RS07945	0.36	+0.0
1,781,792	+		LRK53_RS07945	0.36	+3.0
1,781,792	+		LRK53_RS07945	0.36	+1.6
1,781,792	+		LRK53_RS07945	0.36	+0.4
1,781,792	+		LRK53_RS07945	0.36	-2.6
1,781,793	-		LRK53_RS07945	0.36	-1.0
1,781,793	-		LRK53_RS07945	0.36	-0.8
1,781,793	-		LRK53_RS07945	0.36	+0.0
1,781,793	-		LRK53_RS07945	0.36	-0.6
1,781,793	-		LRK53_RS07945	0.36	-0.6
1,782,008	+		LRK53_RS07945	0.40	-1.4
1,782,008	+		LRK53_RS07945	0.40	+0.0
1,782,008	+		LRK53_RS07945	0.40	+0.4
1,782,008	+		LRK53_RS07945	0.40	-0.6
1,782,008	+		LRK53_RS07945	0.40	+0.0
1,782,008	+		LRK53_RS07945	0.40	+0.2
1,782,009	-		LRK53_RS07945	0.40	-1.8
1,782,009	-		LRK53_RS07945	0.40	+1.0
1,782,009	-		LRK53_RS07945	0.40	-0.8
1,782,009	-		LRK53_RS07945	0.40	-1.0
1,782,009	-		LRK53_RS07945	0.40	-0.3
1,782,009	-		LRK53_RS07945	0.40	-1.0
1,782,009	-		LRK53_RS07945	0.40	-1.3
1,782,009	-		LRK53_RS07945	0.40	-2.0
1,782,009	-		LRK53_RS07945	0.40	+0.3
1,782,009	-		LRK53_RS07945	0.40	+0.0
1,782,009	-		LRK53_RS07945	0.40	-0.6
1,782,042	+		LRK53_RS07945	0.41	+0.0
1,782,044	+		LRK53_RS07945	0.41	+1.0
1,782,044	+		LRK53_RS07945	0.41	-0.6
1,782,044	+		LRK53_RS07945	0.41	-1.0
1,782,044	+		LRK53_RS07945	0.41	+1.0
1,782,044	+		LRK53_RS07945	0.41	+1.0
1,782,044	+		LRK53_RS07945	0.41	-0.9
1,782,044	+		LRK53_RS07945	0.41	-0.3
1,782,044	+		LRK53_RS07945	0.41	+1.0
1,782,044	+		LRK53_RS07945	0.41	-0.6
1,782,044	+		LRK53_RS07945	0.41	-1.8
1,782,044	+		LRK53_RS07945	0.41	-1.8
1,782,044	+		LRK53_RS07945	0.41	-0.9
1,782,044	+		LRK53_RS07945	0.41	-0.6
1,782,044	+		LRK53_RS07945	0.41	+1.6
1,782,044	+		LRK53_RS07945	0.41	-0.6
1,782,045	-		LRK53_RS07945	0.41	-1.6
1,782,045	-		LRK53_RS07945	0.41	-1.8
1,782,045	-		LRK53_RS07945	0.41	-1.0
1,782,045	-		LRK53_RS07945	0.41	-0.6
1,782,045	-		LRK53_RS07945	0.41	+0.0
1,782,045	-		LRK53_RS07945	0.41	-0.7
1,782,045	-		LRK53_RS07945	0.41	-0.2
1,782,045	-		LRK53_RS07945	0.41	-2.2
1,782,045	-		LRK53_RS07945	0.41	+0.0
1,782,045	-		LRK53_RS07945	0.41	-0.6
1,782,045	-		LRK53_RS07945	0.41	+1.0
1,782,045	-		LRK53_RS07945	0.41	-0.8
1,782,045	-		LRK53_RS07945	0.41	-1.5
1,782,045	-		LRK53_RS07945	0.41	+1.0
1,782,306	+		LRK53_RS07945	0.46	+0.0
1,782,306	+		LRK53_RS07945	0.46	-1.0
1,782,306	+		LRK53_RS07945	0.46	-1.8
1,782,306	+		LRK53_RS07945	0.46	-1.0
1,782,306	+		LRK53_RS07945	0.46	+2.0
1,782,307	-		LRK53_RS07945	0.46	+1.0
1,782,307	-		LRK53_RS07945	0.46	+1.0
1,782,307	-		LRK53_RS07945	0.46	+0.0
1,782,307	-		LRK53_RS07945	0.46	-0.6
1,782,307	-		LRK53_RS07945	0.46	-0.6
1,782,422	+		LRK53_RS07945	0.49	-0.6
1,782,422	+		LRK53_RS07945	0.49	-1.8
1,782,422	+		LRK53_RS07945	0.49	+0.3
1,782,422	+		LRK53_RS07945	0.49	+0.0
1,782,422	+		LRK53_RS07945	0.49	-1.3
1,782,422	+		LRK53_RS07945	0.49	-1.0
1,782,422	+		LRK53_RS07945	0.49	-0.6
1,782,422	+		LRK53_RS07945	0.49	-1.5
1,782,422	+		LRK53_RS07945	0.49	+1.7
1,782,422	+		LRK53_RS07945	0.49	-1.8
1,782,422	+		LRK53_RS07945	0.49	-2.4
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