Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07600

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,697,691	-		LRK53_RS07590	0.83	+1.0
1,697,691	-		LRK53_RS07590	0.83	+0.7
1,697,795	-		LRK53_RS07590	0.89	+1.0
1,697,795	-		LRK53_RS07590	0.89	-1.4
1,697,805	+		LRK53_RS07590	0.90	-1.3
1,697,805	+		LRK53_RS07590	0.90	-0.8
1,697,806	-		LRK53_RS07590	0.90	-2.0
1,697,806	-		LRK53_RS07590	0.90	-1.3
1,697,811	+				+1.0
1,697,811	+				+0.3
1,697,811	+				-0.8
1,697,811	+				+2.6
1,697,811	+				-2.1
1,697,811	+				-0.6
1,697,811	+				-0.6
1,697,811	+				+0.0
1,697,812	-				-0.6
1,697,812	-				-1.6
1,697,812	-				-1.3
1,697,812	-				-0.8
1,697,812	-				+0.2
1,697,812	-				-1.2
1,697,812	-				-0.8
1,697,812	-				+1.0
1,697,812	-				-1.0
1,697,812	-				-1.4
1,697,812	-				-0.3
1,697,814	+				+2.0
1,697,814	+				+2.0
1,697,815	-				-0.6
1,697,815	-				+0.0
1,697,815	-				-1.0
1,697,815	-				+1.0
1,697,898	+				-0.3
1,697,898	+				-0.6
1,697,898	+				-3.6
1,697,898	+				-0.9
1,697,899	-				-0.3
1,698,018	+				-1.0
1,698,018	+				+1.0
1,698,019	-				+0.0
1,698,019	-				-1.0
1,698,019	-				+0.8
1,698,020	+				-1.7
1,698,020	+				-0.4
1,698,020	+				+0.4
1,698,020	+				-0.0
1,698,020	+				-0.5
1,698,020	+				+1.0
1,698,020	+				-0.2
1,698,020	+				-1.0
1,698,020	+				-1.4
1,698,020	+				+0.0
1,698,020	+				-0.3
1,698,020	+				-0.1
1,698,020	+				+1.0
1,698,020	+				+0.0
1,698,021	-				-1.1
1,698,021	-				-0.3
1,698,021	-				+0.7
1,698,021	-				+1.4
1,698,021	-				+1.4
1,698,021	-				-0.3
1,698,021	-				-0.8
1,698,021	-				-1.5
1,698,023	-				-1.0
1,698,093	+				+0.4
1,698,093	+				-1.2
1,698,093	+				-1.0
1,698,094	-				-1.8
1,698,094	-				-0.7
1,698,493	+				+0.0
1,698,494	-				+2.6
1,698,494	-				+1.4
1,698,494	-				-1.6
1,698,509	+				+0.0
1,698,509	+				+1.0
1,698,509	+				+0.0
1,698,509	+				-0.6
1,698,509	+				+0.0
1,698,510	-				-1.0
1,698,510	-				-0.2
1,698,510	-				+0.3
1,698,587	+				+2.0
1,698,587	+				-1.4
1,698,587	+				-0.5
1,698,587	+				+1.0
1,698,587	+				-0.5
1,698,588	-				+0.0
1,698,588	-				+1.0
1,698,588	-				-2.0
1,698,588	-				-0.1
1,698,588	-				-1.8
1,698,588	-				-0.6
1,698,588	-				+0.0
1,698,588	-				-0.4
1,699,176	-		LRK53_RS07600	0.89	-1.2
1,699,279	+				+0.0
1,699,279	+				-1.5
1,699,279	+				-1.3
1,699,279	+				-0.1
1,699,280	-				-0.4
1,699,280	-				+0.0
1,699,280	-				+0.0
1,699,280	-				-1.3
1,699,402	+		LRK53_RS07605	0.16	-2.4
1,699,402	+		LRK53_RS07605	0.16	-0.1
1,699,402	+		LRK53_RS07605	0.16	-1.8
1,699,402	+		LRK53_RS07605	0.16	+1.3
1,699,402	+		LRK53_RS07605	0.16	-0.8
1,699,402	+		LRK53_RS07605	0.16	+0.4
1,699,402	+		LRK53_RS07605	0.16	-0.7
1,699,402	+		LRK53_RS07605	0.16	-1.3
1,699,402	+		LRK53_RS07605	0.16	-1.3
1,699,402	+		LRK53_RS07605	0.16	-0.9
1,699,402	+		LRK53_RS07605	0.16	+0.4
1,699,402	+		LRK53_RS07605	0.16	+0.0
1,699,403	-		LRK53_RS07605	0.16	-1.3
1,699,403	-		LRK53_RS07605	0.16	+0.2
1,699,403	-		LRK53_RS07605	0.16	+0.8
1,699,403	-		LRK53_RS07605	0.16	-2.0
1,699,403	-		LRK53_RS07605	0.16	+0.0
1,699,403	-		LRK53_RS07605	0.16	+0.0
1,699,403	-		LRK53_RS07605	0.16	+0.4
1,699,403	-		LRK53_RS07605	0.16	-0.2
1,699,630	+		LRK53_RS07605	0.40	-1.0
1,699,630	+		LRK53_RS07605	0.40	-0.7
1,699,631	-		LRK53_RS07605	0.40	-0.1
1,699,631	-		LRK53_RS07605	0.40	-0.2
1,699,631	-		LRK53_RS07605	0.40	+0.0
1,699,631	-		LRK53_RS07605	0.40	-0.6
1,699,631	-		LRK53_RS07605	0.40	-0.9
1,699,631	-		LRK53_RS07605	0.40	-0.6
1,699,894	+		LRK53_RS07605	0.68	-1.0
1,699,894	+		LRK53_RS07605	0.68	-0.2
1,699,894	+		LRK53_RS07605	0.68	-0.6
1,699,894	+		LRK53_RS07605	0.68	-1.3
1,699,894	+		LRK53_RS07605	0.68	+0.2
1,699,894	+		LRK53_RS07605	0.68	+1.0
1,699,894	+		LRK53_RS07605	0.68	+1.0
1,699,894	+		LRK53_RS07605	0.68	-3.1
1,699,894	+		LRK53_RS07605	0.68	+0.0
1,699,894	+		LRK53_RS07605	0.68	-0.4
1,699,894	+		LRK53_RS07605	0.68	-2.4
1,699,894	+		LRK53_RS07605	0.68	+0.0
1,699,894	+		LRK53_RS07605	0.68	-2.7
1,699,894	+		LRK53_RS07605	0.68	+0.0
1,699,895	-		LRK53_RS07605	0.68	+1.0
1,699,895	-		LRK53_RS07605	0.68	-0.5
1,699,895	-		LRK53_RS07605	0.68	-1.6
1,699,895	-		LRK53_RS07605	0.68	+0.4
1,699,895	-		LRK53_RS07605	0.68	-2.3
1,699,895	-		LRK53_RS07605	0.68	-2.2
1,699,895	-		LRK53_RS07605	0.68	+0.0
1,699,895	-		LRK53_RS07605	0.68	-1.2
1,699,895	-		LRK53_RS07605	0.68	+0.0
1,699,895	-		LRK53_RS07605	0.68	-0.6
1,699,895	-		LRK53_RS07605	0.68	-0.2
1,700,005	+		LRK53_RS07605	0.80	-2.3
1,700,005	+		LRK53_RS07605	0.80	+0.0
1,700,006	-		LRK53_RS07605	0.80	+0.0
1,700,006	-		LRK53_RS07605	0.80	-1.0
1,700,006	-		LRK53_RS07605	0.80	+0.0
1,700,006	-		LRK53_RS07605	0.80	+0.4
1,700,006	-		LRK53_RS07605	0.80	-0.2
1,700,006	-		LRK53_RS07605	0.80	+0.0
1,700,017	+		LRK53_RS07605	0.81	-1.0
1,700,017	+		LRK53_RS07605	0.81	+1.0
1,700,017	+		LRK53_RS07605	0.81	+1.0
1,700,017	+		LRK53_RS07605	0.81	-0.8
1,700,017	+		LRK53_RS07605	0.81	-0.2
1,700,017	+		LRK53_RS07605	0.81	+0.3
1,700,018	-		LRK53_RS07605	0.81	-0.6
1,700,018	-		LRK53_RS07605	0.81	-2.2
1,700,018	-		LRK53_RS07605	0.81	-1.8
1,700,018	-		LRK53_RS07605	0.81	+0.8
1,700,018	-		LRK53_RS07605	0.81	-0.2
1,700,018	-		LRK53_RS07605	0.81	-0.6
1,700,089	+		LRK53_RS07605	0.89	+1.0
1,700,090	-		LRK53_RS07605	0.89	-1.8
1,700,090	-		LRK53_RS07605	0.89	+0.5
1,700,090	-		LRK53_RS07605	0.89	+0.6
1,700,090	-		LRK53_RS07605	0.89	-1.8
1,700,090	-		LRK53_RS07605	0.89	-1.2
1,700,090	-		LRK53_RS07605	0.89	+0.0
1,700,090	-		LRK53_RS07605	0.89	+0.2
1,700,119	+				+2.0
1,700,120	-				+0.7
1,700,120	-				-0.6