Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06945

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,565,855	+				-0.9
1,565,855	+				-0.4
1,565,855	+				-0.6
1,565,855	+				+2.4
1,565,855	+				+0.6
1,565,855	+				-1.2
1,565,856	-				+2.0
1,565,927	+				+0.3
1,565,928	-				-1.3
1,565,928	-				+1.6
1,565,944	+				+1.0
1,565,944	+				-1.1
1,565,944	+				-1.6
1,565,944	+				+2.0
1,565,960	+		LRK53_RS06935	0.15	+1.0
1,565,960	+		LRK53_RS06935	0.15	+1.0
1,566,173	+				+1.0
1,566,173	+				-0.6
1,566,173	+				+1.0
1,566,174	-				-0.7
1,566,174	-				+0.0
1,566,174	-				+0.5
1,566,174	-				+1.7
1,566,544	+				+2.0
1,566,544	+				+0.0
1,566,544	+				-2.7
1,566,545	-				+1.0
1,566,550	+				+0.0
1,566,550	+				+1.0
1,566,550	+				-1.3
1,566,550	+				-0.2
1,566,550	+				-1.0
1,566,551	-				+0.4
1,566,551	-				+0.4
1,566,551	-				+1.0
1,566,551	-				-1.7
1,566,551	-				-1.2
1,566,551	-				+0.7
1,566,551	-				-1.0
1,566,551	-				-0.9
1,566,551	-				+0.0
1,566,684	+				-0.6
1,566,684	+				-1.6
1,566,685	-				-0.6
1,566,685	-				+0.3
1,566,748	+				+1.0
1,566,748	+				+0.0
1,566,748	+				+0.3
1,566,748	+				+0.8
1,566,748	+				-0.2
1,566,748	+				-0.6
1,566,748	+				+0.4
1,566,748	+				-1.5
1,566,748	+				-0.2
1,566,748	+				-0.5
1,566,748	+				-0.8
1,566,748	+				-1.7
1,566,748	+				-1.3
1,566,748	+				-1.6
1,566,748	+				-0.6
1,566,748	+				-0.3
1,566,749	-				-0.6
1,566,749	-				-0.6
1,566,749	-				-1.0
1,566,749	-				+0.4
1,566,749	-				-0.6
1,566,749	-				+1.0
1,566,749	-				-0.4
1,566,749	-				-1.3
1,566,749	-				-0.8
1,566,749	-				-0.4
1,566,749	-				+0.0
1,566,749	-				+0.0
1,566,760	+				-1.3
1,566,760	+				-1.0
1,566,760	+				-1.3
1,566,760	+				-0.4
1,566,760	+				-0.3
1,566,760	+				-0.6
1,566,760	+				-1.2
1,566,760	+				-2.3
1,566,760	+				-0.5
1,566,760	+				-0.6
1,566,760	+				-3.6
1,566,760	+				-0.6
1,566,760	+				-1.0
1,566,761	-				-1.0
1,566,761	-				+1.0
1,566,761	-				+0.6
1,566,761	-				-2.5
1,566,761	-				-1.0
1,566,761	-				-0.6
1,566,761	-				+0.3
1,566,761	-				-0.8
1,566,956	+				-0.6
1,566,956	+				-0.6
1,566,956	+				+1.0
1,566,956	+				+1.0
1,566,956	+				-0.9
1,566,956	+				+1.0
1,566,956	+				-0.6
1,566,956	+				+1.0
1,566,957	-				+2.6
1,566,957	-				-0.6
1,566,957	-				-0.8
1,566,957	-				-0.6
1,566,957	-				+1.6
1,566,957	-				-1.8
1,566,957	-				+2.6
1,567,196	+		LRK53_RS06945	0.28	-1.0
1,567,196	+		LRK53_RS06945	0.28	-1.2
1,567,197	-		LRK53_RS06945	0.28	-1.7
1,567,197	-		LRK53_RS06945	0.28	-1.6
1,567,197	-		LRK53_RS06945	0.28	+0.4
1,567,197	-		LRK53_RS06945	0.28	+0.0
1,567,197	-		LRK53_RS06945	0.28	-1.8
1,567,197	-		LRK53_RS06945	0.28	-1.0
1,567,197	-		LRK53_RS06945	0.28	-2.2
1,567,197	-		LRK53_RS06945	0.28	+0.0
1,567,197	-		LRK53_RS06945	0.28	+1.0
1,567,197	-		LRK53_RS06945	0.28	-0.6
1,567,197	-		LRK53_RS06945	0.28	-0.6
1,567,482	-		LRK53_RS06945	0.51	+0.0
1,567,482	-		LRK53_RS06945	0.51	-0.3
1,567,598	+		LRK53_RS06945	0.60	+0.0
1,567,598	+		LRK53_RS06945	0.60	-1.3
1,567,598	+		LRK53_RS06945	0.60	+2.0
1,567,598	+		LRK53_RS06945	0.60	-0.6
1,567,598	+		LRK53_RS06945	0.60	-1.8
1,567,599	-		LRK53_RS06945	0.61	+0.0
1,567,599	-		LRK53_RS06945	0.61	-1.0
1,567,599	-		LRK53_RS06945	0.61	+0.0
1,567,599	-		LRK53_RS06945	0.61	-2.0
1,567,599	-		LRK53_RS06945	0.61	-2.5
1,567,599	-		LRK53_RS06945	0.61	-0.6
1,567,599	-		LRK53_RS06945	0.61	-2.2
1,567,599	-		LRK53_RS06945	0.61	+0.0
1,567,599	-		LRK53_RS06945	0.61	+0.3
1,567,915	+		LRK53_RS06945	0.86	-1.9
1,567,916	-		LRK53_RS06945	0.86	+1.0
1,568,430	+				-0.6
1,568,430	+				+1.0
1,568,431	-				+0.2
1,568,431	-				-1.0
1,568,444	+				+0.0
1,568,444	+				-1.0
1,568,444	+				-0.4
1,568,444	+				-0.6
1,568,445	-				+0.1
1,568,445	-				-0.5
1,568,445	-				-2.6
1,568,445	-				-0.9
1,568,626	+		LRK53_RS06955	0.17	-0.3
1,568,690	-		LRK53_RS06955	0.23	+0.3
1,568,929	+		LRK53_RS06955	0.45	-1.7
1,568,929	+		LRK53_RS06955	0.45	-0.5
1,568,929	+		LRK53_RS06955	0.45	-0.6
1,568,929	+		LRK53_RS06955	0.45	-1.0
1,568,929	+		LRK53_RS06955	0.45	+0.2
1,568,929	+		LRK53_RS06955	0.45	-1.1
1,568,929	+		LRK53_RS06955	0.45	-1.0
1,568,929	+		LRK53_RS06955	0.45	-0.7
1,568,929	+		LRK53_RS06955	0.45	-0.2
1,568,929	+		LRK53_RS06955	0.45	+0.1
1,568,930	-		LRK53_RS06955	0.45	+0.0
1,568,930	-		LRK53_RS06955	0.45	+0.7
1,568,930	-		LRK53_RS06955	0.45	+0.0
1,568,930	-		LRK53_RS06955	0.45	-0.6
1,568,930	-		LRK53_RS06955	0.45	-0.6
1,568,930	-		LRK53_RS06955	0.45	-0.4
1,569,082	+		LRK53_RS06955	0.59	+1.0
1,569,082	+		LRK53_RS06955	0.59	-1.7
1,569,082	+		LRK53_RS06955	0.59	-2.0
1,569,082	+		LRK53_RS06955	0.59	-1.1
1,569,082	+		LRK53_RS06955	0.59	-1.0
1,569,082	+		LRK53_RS06955	0.59	-1.6
1,569,082	+		LRK53_RS06955	0.59	+1.0
1,569,082	+		LRK53_RS06955	0.59	-1.0
1,569,083	-		LRK53_RS06955	0.59	+0.0
1,569,083	-		LRK53_RS06955	0.59	-1.5
1,569,083	-		LRK53_RS06955	0.59	+1.0
1,569,083	-		LRK53_RS06955	0.59	-1.3
1,569,083	-		LRK53_RS06955	0.59	-1.3
1,569,083	-		LRK53_RS06955	0.59	+0.0
1,569,083	-		LRK53_RS06955	0.59	-0.4
1,569,083	-		LRK53_RS06955	0.59	-0.6
1,569,083	-		LRK53_RS06955	0.59	-0.6
1,569,083	-		LRK53_RS06955	0.59	-0.6