Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06570

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,489,761	+		LRK53_RS06565	0.85	+0.0
1,489,761	+		LRK53_RS06565	0.85	-0.8
1,489,761	+		LRK53_RS06565	0.85	-0.5
1,489,762	-		LRK53_RS06565	0.85	-1.3
1,489,762	-		LRK53_RS06565	0.85	-0.6
1,489,762	-		LRK53_RS06565	0.85	-0.9
1,489,762	-		LRK53_RS06565	0.85	+1.0
1,489,960	+				-0.4
1,489,960	+				+0.0
1,489,960	+				-1.3
1,489,960	+				-0.6
1,489,961	-				-0.6
1,489,961	-				+1.0
1,489,961	-				-2.0
1,489,961	-				-1.3
1,489,961	-				-1.5
1,489,961	-				-1.3
1,489,961	-				-1.3
1,489,961	-				-0.6
1,489,961	-				+0.0
1,489,961	-				+1.0
1,489,977	+				+0.3
1,489,977	+				-0.6
1,489,977	+				-0.6
1,489,977	+				-1.0
1,489,977	+				-1.0
1,489,977	+				-1.2
1,489,977	+				-0.6
1,489,977	+				+0.0
1,489,977	+				+2.2
1,489,977	+				-0.5
1,489,977	+				-0.7
1,489,978	-				-0.2
1,489,978	-				-1.6
1,489,978	-				+0.0
1,489,995	+				-0.6
1,489,995	+				+0.4
1,489,995	+				-0.7
1,489,995	+				-0.8
1,489,995	+				-1.6
1,489,995	+				-0.4
1,489,995	+				+1.0
1,489,995	+				-0.6
1,489,996	-				-0.6
1,489,996	-				-0.4
1,489,996	-				+0.0
1,489,996	-				-0.4
1,489,996	-				+1.0
1,489,996	-				-0.3
1,490,565	+				-0.3
1,490,565	+				+0.3
1,490,566	-				+0.3
1,490,566	-				-1.0
1,490,571	+				+0.1
1,490,571	+				-0.6
1,490,571	+				-1.0
1,490,571	+				-0.3
1,490,571	+				-1.3
1,490,572	-				-1.3
1,490,572	-				+0.4
1,490,572	-				+1.3
1,490,572	-				+0.0
1,490,572	-				-1.2
1,490,572	-				+0.4
1,490,572	-				+0.7
1,490,572	-				+0.5
1,490,572	-				+1.0
1,490,574	+				-1.4
1,490,574	+				-0.3
1,490,575	-				+1.0
1,490,575	-				-0.9
1,490,575	-				-1.3
1,490,605	+				-0.3
1,490,606	-				-1.3
1,490,696	+				-0.8
1,490,696	+				-1.0
1,490,696	+				-1.6
1,490,697	-				-1.3
1,490,697	-				+0.7
1,490,697	-				-0.6
1,490,766	+		LRK53_RS06570	0.11	-1.0
1,490,817	-		LRK53_RS06570	0.20	-0.9
1,491,431	-		LRK53_RS06575	0.56	-0.2
1,491,431	-		LRK53_RS06575	0.56	+0.3
1,491,442	+		LRK53_RS06575	0.60	-2.9
1,491,442	+		LRK53_RS06575	0.60	-2.7
1,491,443	-		LRK53_RS06575	0.60	+2.0
1,491,443	-		LRK53_RS06575	0.60	-3.0
1,491,443	-		LRK53_RS06575	0.60	+0.0
1,491,443	-		LRK53_RS06575	0.60	-0.3
1,491,483	-		LRK53_RS06575	0.76	-0.9
1,491,483	-		LRK53_RS06575	0.76	-0.6
1,491,511	+		LRK53_RS06575	0.87	-0.3
1,491,511	+		LRK53_RS06575	0.87	-1.0
1,491,511	+		LRK53_RS06575	0.87	+1.0
1,491,511	+		LRK53_RS06575	0.87	-1.0
1,491,511	+		LRK53_RS06575	0.87	-0.6
1,491,511	+		LRK53_RS06575	0.87	-0.9
1,491,511	+		LRK53_RS06575	0.87	-2.2
1,491,511	+		LRK53_RS06575	0.87	-1.4
1,491,512	-		LRK53_RS06575	0.88	-1.2
1,491,512	-		LRK53_RS06575	0.88	+0.4
1,491,512	-		LRK53_RS06575	0.88	-1.4
1,491,512	-		LRK53_RS06575	0.88	+0.0
1,491,512	-		LRK53_RS06575	0.88	+0.4
1,491,512	-		LRK53_RS06575	0.88	-0.6
1,491,512	-		LRK53_RS06575	0.88	-0.2
1,491,520	+				+1.0
1,491,520	+				-0.6
1,491,520	+				-0.2
1,491,520	+				+2.0
1,491,520	+				-1.0
1,491,520	+				+0.2
1,491,520	+				-1.3
1,491,520	+				+0.0
1,491,520	+				-0.1
1,491,520	+				-1.0
1,491,520	+				+0.0
1,491,520	+				+0.0
1,491,520	+				-1.0
1,491,520	+				+0.0
1,491,520	+				-0.6
1,491,520	+				-1.5
1,491,521	-				-2.3
1,491,521	-				-0.6
1,491,521	-				+1.0
1,491,521	-				+0.0
1,491,521	-				+1.3
1,491,521	-				-0.6
1,491,521	-				+1.0
1,491,521	-				-0.6
1,491,521	-				+1.0
1,491,521	-				-1.2
1,491,521	-				+0.3
1,491,521	-				-1.0
1,491,521	-				-0.3
1,491,521	-				-1.3
1,491,521	-				-0.3
1,491,521	-				-0.3
1,491,521	-				-0.3
1,491,521	-				+1.0
1,491,521	-				+0.0
1,491,521	-				+0.6
1,491,521	-				-1.4
1,491,521	-				-1.1
1,491,521	-				-0.7
1,491,521	-				-2.2
1,491,521	-				+1.0
1,491,533	+				-1.0
1,491,533	+				-0.1
1,491,533	+				-1.8
1,491,533	+				+0.0
1,491,533	+				-0.1
1,491,534	-				-1.3
1,491,534	-				-1.6
1,491,608	+				+0.0
1,491,608	+				+0.0
1,491,609	-				+0.3
1,491,609	-				-0.3
1,491,609	-				+1.0
1,491,613	+				+1.3
1,491,614	-				-0.6
1,491,614	-				+1.0
1,491,614	-				-0.9
1,491,621	+				-1.8
1,491,621	+				-0.6
1,491,621	+				+1.0
1,491,621	+				+0.6
1,491,621	+				-2.1
1,491,621	+				-0.5
1,491,621	+				+1.0
1,491,621	+				+0.0
1,491,621	+				-1.0
1,491,621	+				-1.4
1,491,621	+				-1.8
1,491,621	+				+0.4
1,491,621	+				+0.0
1,491,621	+				+2.0
1,491,621	+				-0.8
1,491,621	+				-2.3
1,491,621	+				-0.6
1,491,621	+				+0.4
1,491,621	+				-1.3
1,491,622	-				+1.0
1,491,622	-				-0.8
1,491,622	-				+0.0
1,491,622	-				+0.0
1,491,622	-				+2.0
1,491,622	-				+0.4
1,491,622	-				-1.1
1,491,622	-				+1.0
1,491,622	-				-0.6
1,491,622	-				-0.7
1,491,622	-				-0.5
1,491,622	-				+1.0
1,491,622	-				-1.3
1,491,622	-				+1.0
1,491,623	+				-0.8
1,491,856	+		LRK53_RS06580	0.16	+1.0
1,491,856	+		LRK53_RS06580	0.16	+2.0
1,491,856	+		LRK53_RS06580	0.16	-1.6
1,491,856	+		LRK53_RS06580	0.16	-2.2
1,491,857	-		LRK53_RS06580	0.16	-3.7
1,491,857	-		LRK53_RS06580	0.16	-0.8
1,491,857	-		LRK53_RS06580	0.16	-0.8
1,491,857	-		LRK53_RS06580	0.16	+0.4
1,491,857	-		LRK53_RS06580	0.16	-0.6
1,491,857	-		LRK53_RS06580	0.16	+1.0
1,491,857	-		LRK53_RS06580	0.16	+2.0
1,491,949	+		LRK53_RS06580	0.22	+0.2
1,492,156	+		LRK53_RS06580	0.38	+0.0
1,492,156	+		LRK53_RS06580	0.38	+1.0
1,492,156	+		LRK53_RS06580	0.38	-1.0
1,492,255	+		LRK53_RS06580	0.45	+1.6
1,492,255	+		LRK53_RS06580	0.45	+1.0
1,492,255	+		LRK53_RS06580	0.45	+2.0
1,492,255	+		LRK53_RS06580	0.45	-1.7
1,492,256	-		LRK53_RS06580	0.45	+0.0
1,492,256	-		LRK53_RS06580	0.45	-0.9
1,492,261	+		LRK53_RS06580	0.45	-0.7
1,492,261	+		LRK53_RS06580	0.45	+0.0
1,492,262	-		LRK53_RS06580	0.45	-1.4