Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05725

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,326,571	+				-1.8
1,326,571	+				-0.6
1,326,571	+				+1.0
1,326,571	+				-0.4
1,326,571	+				-1.2
1,326,571	+				-1.2
1,326,571	+				-0.0
1,326,571	+				-1.0
1,326,571	+				-0.2
1,326,571	+				-2.1
1,326,571	+				-2.0
1,326,571	+				-1.7
1,326,571	+				-0.6
1,326,571	+				-0.6
1,326,571	+				-0.0
1,326,571	+				+2.3
1,326,571	+				-0.6
1,326,571	+				-1.3
1,326,571	+				+1.0
1,326,571	+				-2.0
1,326,571	+				+2.0
1,326,571	+				+1.4
1,326,571	+				+1.0
1,326,571	+				-2.3
1,326,571	+				-0.6
1,326,571	+				+1.0
1,326,571	+				-0.0
1,326,571	+				-0.9
1,326,571	+				+1.3
1,326,571	+				-1.3
1,326,571	+				-0.0
1,326,572	-				+0.3
1,326,572	-				-0.6
1,326,572	-				-1.0
1,326,572	-				-0.0
1,326,572	-				-0.6
1,326,572	-				-0.4
1,326,572	-				-0.6
1,326,572	-				-2.5
1,326,572	-				-1.0
1,326,572	-				-0.2
1,326,572	-				-0.5
1,326,572	-				-1.0
1,326,572	-				-1.3
1,326,572	-				-0.3
1,326,572	-				-1.6
1,326,572	-				-1.0
1,326,572	-				-1.6
1,326,572	-				-0.9
1,326,572	-				-1.9
1,326,572	-				-1.0
1,326,572	-				-1.3
1,326,572	-				-0.7
1,326,572	-				-0.5
1,326,572	-				+2.0
1,326,572	-				-0.7
1,326,572	-				-0.6
1,326,572	-				-1.0
1,326,572	-				+1.0
1,326,572	-				-0.0
1,326,572	-				+1.3
1,326,572	-				-0.4
1,326,572	-				-1.3
1,326,572	-				-0.5
1,326,578	+				+1.0
1,326,578	+				-0.0
1,326,578	+				-0.6
1,326,578	+				+0.4
1,326,579	-				-0.2
1,326,579	-				-0.8
1,326,579	-				+1.0
1,326,579	-				-0.8
1,326,874	-		LRK53_RS05720	0.29	-1.0
1,326,874	-		LRK53_RS05720	0.29	-0.0
1,326,874	-		LRK53_RS05720	0.29	+0.1
1,326,917	+		LRK53_RS05720	0.34	+1.4
1,326,917	+		LRK53_RS05720	0.34	+0.3
1,326,917	+		LRK53_RS05720	0.34	-0.6
1,326,917	+		LRK53_RS05720	0.34	+1.4
1,326,917	+		LRK53_RS05720	0.34	+0.4
1,326,917	+		LRK53_RS05720	0.34	-0.8
1,326,917	+		LRK53_RS05720	0.34	-1.7
1,326,917	+		LRK53_RS05720	0.34	+0.6
1,326,917	+		LRK53_RS05720	0.34	-0.6
1,326,917	+		LRK53_RS05720	0.34	-2.0
1,326,917	+		LRK53_RS05720	0.34	+0.2
1,326,918	-		LRK53_RS05720	0.34	+0.6
1,326,918	-		LRK53_RS05720	0.34	+1.0
1,326,918	-		LRK53_RS05720	0.34	+2.0
1,326,918	-		LRK53_RS05720	0.34	-0.0
1,326,918	-		LRK53_RS05720	0.34	-1.3
1,326,918	-		LRK53_RS05720	0.34	+1.0
1,326,918	-		LRK53_RS05720	0.34	+0.5
1,326,918	-		LRK53_RS05720	0.34	+0.4
1,326,918	-		LRK53_RS05720	0.34	+0.3
1,326,918	-		LRK53_RS05720	0.34	-0.9
1,326,918	-		LRK53_RS05720	0.34	-0.4
1,326,918	-		LRK53_RS05720	0.34	-0.6
1,326,918	-		LRK53_RS05720	0.34	-1.3
1,326,918	-		LRK53_RS05720	0.34	-0.4
1,326,918	-		LRK53_RS05720	0.34	+0.4
1,326,918	-		LRK53_RS05720	0.34	-1.8
1,326,918	-		LRK53_RS05720	0.34	+0.4
1,326,918	-		LRK53_RS05720	0.34	-0.6
1,326,918	-		LRK53_RS05720	0.34	+1.0
1,326,921	+		LRK53_RS05720	0.35	-0.0
1,326,921	+		LRK53_RS05720	0.35	-0.2
1,326,922	-		LRK53_RS05720	0.35	-0.6
1,326,922	-		LRK53_RS05720	0.35	-0.6
1,326,922	-		LRK53_RS05720	0.35	+0.1
1,326,922	-		LRK53_RS05720	0.35	-0.4
1,326,922	-		LRK53_RS05720	0.35	-0.2
1,326,922	-		LRK53_RS05720	0.35	-0.6
1,326,922	-		LRK53_RS05720	0.35	-0.0
1,326,930	+		LRK53_RS05720	0.36	-0.3
1,326,936	+		LRK53_RS05720	0.36	-2.3
1,326,936	+		LRK53_RS05720	0.36	-2.0
1,326,936	+		LRK53_RS05720	0.36	-1.0
1,326,937	-		LRK53_RS05720	0.36	-0.0
1,326,937	-		LRK53_RS05720	0.36	-0.6
1,326,960	+		LRK53_RS05720	0.39	+0.4
1,326,960	+		LRK53_RS05720	0.39	-0.3
1,326,960	+		LRK53_RS05720	0.39	-0.6
1,326,960	+		LRK53_RS05720	0.39	+1.0
1,326,960	+		LRK53_RS05720	0.39	-0.6
1,326,960	+		LRK53_RS05720	0.39	+0.7
1,326,960	+		LRK53_RS05720	0.39	+0.3
1,326,961	-		LRK53_RS05720	0.39	-1.3
1,326,961	-		LRK53_RS05720	0.39	-1.0
1,326,961	-		LRK53_RS05720	0.39	+2.0
1,326,961	-		LRK53_RS05720	0.39	-0.8
1,326,961	-		LRK53_RS05720	0.39	-3.4
1,326,961	-		LRK53_RS05720	0.39	-1.0
1,327,548	+				-0.7
1,327,548	+				-1.7
1,327,548	+				-1.0
1,327,548	+				-2.7
1,327,548	+				-0.8
1,327,548	+				-1.0
1,327,548	+				+1.0
1,327,548	+				-1.3
1,327,549	-				-2.0
1,327,549	-				-2.3
1,327,549	-				-1.5
1,327,549	-				-1.4
1,327,549	-				-1.3
1,327,549	-				-0.3
1,327,613	+		LRK53_RS05725	0.13	+1.0
1,327,613	+		LRK53_RS05725	0.13	-0.6
1,327,613	+		LRK53_RS05725	0.13	-1.3
1,327,613	+		LRK53_RS05725	0.13	+1.0
1,327,613	+		LRK53_RS05725	0.13	-2.3
1,327,613	+		LRK53_RS05725	0.13	-1.3
1,327,614	-		LRK53_RS05725	0.13	-0.0
1,327,614	-		LRK53_RS05725	0.13	+1.0
1,327,614	-		LRK53_RS05725	0.13	-2.6
1,327,614	-		LRK53_RS05725	0.13	-2.5
1,327,614	-		LRK53_RS05725	0.13	-2.3
1,327,614	-		LRK53_RS05725	0.13	-1.6
1,327,614	-		LRK53_RS05725	0.13	-0.6
1,327,614	-		LRK53_RS05725	0.13	-1.6
1,327,614	-		LRK53_RS05725	0.13	-2.1
1,327,614	-		LRK53_RS05725	0.13	-0.0
1,327,614	-		LRK53_RS05725	0.13	-2.5
1,327,614	-		LRK53_RS05725	0.13	-1.3
1,327,785	-		LRK53_RS05725	0.31	-2.0
1,327,785	-		LRK53_RS05725	0.31	-2.2
1,328,166	+		LRK53_RS05725	0.70	-3.0
1,328,166	+		LRK53_RS05725	0.70	-1.8
1,328,166	+		LRK53_RS05725	0.70	-0.2
1,328,166	+		LRK53_RS05725	0.70	-0.8
1,328,166	+		LRK53_RS05725	0.70	-0.6
1,328,166	+		LRK53_RS05725	0.70	-0.0
1,328,166	+		LRK53_RS05725	0.70	-2.2
1,328,167	-		LRK53_RS05725	0.70	-1.2
1,328,167	-		LRK53_RS05725	0.70	-2.5
1,328,167	-		LRK53_RS05725	0.70	-3.6
1,328,167	-		LRK53_RS05725	0.70	-2.0
1,328,167	-		LRK53_RS05725	0.70	-1.4
1,328,167	-		LRK53_RS05725	0.70	-2.1
1,328,167	-		LRK53_RS05725	0.70	+0.7
1,328,167	-		LRK53_RS05725	0.70	-1.9
1,328,167	-		LRK53_RS05725	0.70	-1.0
1,328,167	-		LRK53_RS05725	0.70	-2.1
1,328,167	-		LRK53_RS05725	0.70	-0.6
1,328,167	-		LRK53_RS05725	0.70	+2.0
1,328,171	+		LRK53_RS05725	0.70	-0.6
1,328,171	+		LRK53_RS05725	0.70	-2.5
1,328,171	+		LRK53_RS05725	0.70	-0.6
1,328,171	+		LRK53_RS05725	0.70	-2.1
1,328,171	+		LRK53_RS05725	0.70	-1.9
1,328,171	+		LRK53_RS05725	0.70	-2.5
1,328,171	+		LRK53_RS05725	0.70	-1.6
1,328,171	+		LRK53_RS05725	0.70	-0.0
1,328,171	+		LRK53_RS05725	0.70	+0.3
1,328,171	+		LRK53_RS05725	0.70	-0.0
1,328,171	+		LRK53_RS05725	0.70	-0.7
1,328,172	-		LRK53_RS05725	0.70	-1.6
1,328,172	-		LRK53_RS05725	0.70	-1.6
1,328,172	-		LRK53_RS05725	0.70	-1.4
1,328,172	-		LRK53_RS05725	0.70	-1.0
1,328,172	-		LRK53_RS05725	0.70	+0.7
1,328,172	-		LRK53_RS05725	0.70	+1.0
1,328,172	-		LRK53_RS05725	0.70	-2.7
1,328,351	+		LRK53_RS05725	0.88	-2.2
1,328,351	+		LRK53_RS05725	0.88	+1.0
1,328,352	-		LRK53_RS05725	0.89	-1.8
1,328,352	-		LRK53_RS05725	0.89	-0.0
1,328,352	-		LRK53_RS05725	0.89	+1.0
1,328,352	-		LRK53_RS05725	0.89	-0.0
1,328,352	-		LRK53_RS05725	0.89	+1.0
1,328,352	-		LRK53_RS05725	0.89	-2.7
1,328,517	+				-2.1
1,328,517	+				+0.2
1,328,517	+				-1.0
1,328,517	+				-0.6
1,328,517	+				-2.3
1,328,517	+				+0.0
1,328,518	-				-0.4
1,328,518	-				+0.4
1,328,518	-				+0.7
1,328,518	-				+1.6
1,328,518	-				-1.0
1,328,518	-				-0.0
1,328,518	-				-0.0
1,328,530	+				-1.5
1,328,530	+				-1.3
1,328,530	+				+0.6
1,328,530	+				-1.9
1,328,531	-				+2.6
1,328,531	-				+0.4
1,328,531	-				+2.0
1,328,531	-				-1.0
1,328,531	-				-0.0
1,328,531	-				+1.0
1,328,532	+				-1.6
1,328,532	+				+0.6
1,328,532	+				-1.3
1,328,532	+				-1.4
1,328,532	+				-1.0
1,328,532	+				-0.9
1,328,532	+				-1.0
1,328,532	+				-1.0
1,328,532	+				-0.7
1,328,532	+				-0.0
1,328,532	+				-0.1
1,328,532	+				-1.6
1,328,532	+				+1.0
1,328,532	+				-2.3
1,328,532	+				-0.6
1,328,532	+				+1.0
1,328,532	+				-1.3
1,328,532	+				-0.6
1,328,532	+				-1.5
1,328,532	+				-0.6
1,328,532	+				-1.2
1,328,532	+				-0.9
1,328,532	+				+0.7
1,328,532	+				+1.4
1,328,532	+				-0.6
1,328,532	+				-0.0
1,328,532	+				+0.6
1,328,532	+				+1.0
1,328,532	+				+0.4
1,328,532	+				-0.6
1,328,532	+				+1.0
1,328,532	+				+0.4
1,328,532	+				-2.2
1,328,532	+				+1.0
1,328,532	+				-1.0
1,328,532	+				-0.2
1,328,532	+				-3.3
1,328,532	+				+1.0
1,328,532	+				-0.7
1,328,532	+				-1.9
1,328,532	+				-0.6
1,328,532	+				-4.2
1,328,533	-				+1.4
1,328,533	-				-1.3
1,328,533	-				+0.2
1,328,533	-				-0.6
1,328,533	-				-0.1
1,328,533	-				-0.8
1,328,533	-				-0.6
1,328,533	-				-1.8
1,328,533	-				-0.6
1,328,533	-				-0.8
1,328,533	-				-0.5
1,328,533	-				-1.0
1,328,533	-				-0.0
1,328,533	-				-0.6
1,328,533	-				-1.3
1,328,533	-				+1.0
1,328,533	-				-1.3
1,328,533	-				-0.6
1,328,533	-				-0.6
1,328,533	-				-1.3
1,328,533	-				+1.0
1,328,533	-				+0.4
1,328,533	-				+0.4
1,328,533	-				-1.3
1,328,533	-				+1.0
1,328,533	-				-1.0
1,328,533	-				-2.0
1,328,533	-				+1.2
1,328,533	-				+1.6
1,328,533	-				+0.4
1,328,533	-				-0.6
1,328,533	-				+0.2
1,328,533	-				+0.2
1,328,533	-				-0.0
1,328,533	-				-0.0
1,328,533	-				-1.5
1,328,533	-				-1.0
1,328,533	-				-0.6
1,328,533	-				-0.4
1,328,533	-				-0.8
1,328,533	-				-0.6
1,328,533	-				-0.1
1,328,533	-				-0.6
1,328,533	-				+1.0
1,328,533	-				+0.7
1,328,533	-				-1.2
1,328,535	+				-0.3
1,328,535	+				-1.1
1,328,536	-				-1.6
1,328,536	-				-0.7
1,328,536	-				-0.2
1,328,536	-				-0.6
1,328,536	-				-0.0
1,328,615	-				-0.0
1,328,653	+				-0.8
1,328,653	+				-0.8
1,328,653	+				-0.5
1,328,653	+				+0.2
1,328,654	-				-1.0
1,328,654	-				-1.2
1,328,654	-				+1.4
1,328,654	-				-1.7
1,328,683	+				-0.3
1,328,683	+				-1.1
1,328,683	+				+0.6
1,328,684	-				-1.1
1,328,697	-				-1.0
1,328,713	+				-0.6
1,328,790	+				-0.5
1,328,790	+				-0.5
1,328,790	+				-0.6
1,328,791	-				-0.3
1,328,791	-				-0.9
1,328,822	+				+0.4
1,328,822	+				-1.3
1,328,822	+				-0.6
1,328,823	-				+1.0
1,329,037	+		LRK53_RS05730	0.50	-0.2
1,329,157	+		LRK53_RS05730	0.80	+1.0
1,329,157	+		LRK53_RS05730	0.80	+0.6
1,329,157	+		LRK53_RS05730	0.80	-0.0
1,329,157	+		LRK53_RS05730	0.80	-0.3
1,329,157	+		LRK53_RS05730	0.80	-0.6
1,329,157	+		LRK53_RS05730	0.80	-0.0
1,329,157	+		LRK53_RS05730	0.80	-0.0
1,329,157	+		LRK53_RS05730	0.80	+2.0
1,329,157	+		LRK53_RS05730	0.80	+1.0
1,329,157	+		LRK53_RS05730	0.80	-0.6
1,329,157	+		LRK53_RS05730	0.80	-0.6
1,329,158	-		LRK53_RS05730	0.81	-0.6
1,329,158	-		LRK53_RS05730	0.81	-0.8
1,329,158	-		LRK53_RS05730	0.81	-2.4
1,329,158	-		LRK53_RS05730	0.81	+0.4
1,329,158	-		LRK53_RS05730	0.81	-0.0
1,329,158	-		LRK53_RS05730	0.81	-0.7
1,329,158	-		LRK53_RS05730	0.81	-1.0
1,329,158	-		LRK53_RS05730	0.81	-1.0
1,329,222	-				-0.6
1,329,451	+		LRK53_RS05735	0.52	-1.0
1,329,451	+		LRK53_RS05735	0.52	-0.6
1,329,451	+		LRK53_RS05735	0.52	+2.0
1,329,451	+		LRK53_RS05735	0.52	-0.0
1,329,451	+		LRK53_RS05735	0.52	-0.4
1,329,452	-		LRK53_RS05735	0.52	-0.8
1,329,452	-		LRK53_RS05735	0.52	-0.6
1,329,452	-		LRK53_RS05735	0.52	-0.6
1,329,452	-		LRK53_RS05735	0.52	+1.0
1,329,452	-		LRK53_RS05735	0.52	-0.8
1,329,452	-		LRK53_RS05735	0.52	-0.0