Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05355

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,252,200	-				+0.6
1,252,402	-		LRK53_RS05350	0.19	-2.2
1,252,448	+		LRK53_RS05350	0.26	-1.7
1,252,449	-		LRK53_RS05350	0.26	-1.7
1,252,449	-		LRK53_RS05350	0.26	-0.6
1,252,449	-		LRK53_RS05350	0.26	-1.1
1,252,449	-		LRK53_RS05350	0.26	+2.0
1,252,508	+		LRK53_RS05350	0.34	-0.8
1,252,508	+		LRK53_RS05350	0.34	-0.8
1,252,509	-		LRK53_RS05350	0.34	-0.3
1,252,509	-		LRK53_RS05350	0.34	-0.0
1,252,509	-		LRK53_RS05350	0.34	-0.0
1,252,509	-		LRK53_RS05350	0.34	-0.4
1,252,509	-		LRK53_RS05350	0.34	-0.9
1,252,509	-		LRK53_RS05350	0.34	-1.0
1,252,559	+		LRK53_RS05350	0.41	-3.1
1,252,559	+		LRK53_RS05350	0.41	-1.4
1,252,559	+		LRK53_RS05350	0.41	-0.5
1,252,559	+		LRK53_RS05350	0.41	-1.8
1,252,559	+		LRK53_RS05350	0.41	+1.0
1,252,559	+		LRK53_RS05350	0.41	-2.0
1,252,559	+		LRK53_RS05350	0.41	+1.7
1,252,559	+		LRK53_RS05350	0.41	-1.8
1,252,559	+		LRK53_RS05350	0.41	-0.8
1,252,559	+		LRK53_RS05350	0.41	-2.8
1,252,560	-		LRK53_RS05350	0.41	-1.1
1,252,560	-		LRK53_RS05350	0.41	-1.0
1,252,560	-		LRK53_RS05350	0.41	-1.6
1,252,560	-		LRK53_RS05350	0.41	-0.9
1,252,560	-		LRK53_RS05350	0.41	+0.2
1,252,560	-		LRK53_RS05350	0.41	+1.0
1,252,560	-		LRK53_RS05350	0.41	-1.1
1,252,560	-		LRK53_RS05350	0.41	-0.6
1,252,560	-		LRK53_RS05350	0.41	-0.6
1,252,595	+		LRK53_RS05350	0.46	-0.6
1,252,596	-		LRK53_RS05350	0.46	+0.4
1,252,596	-		LRK53_RS05350	0.46	-1.0
1,252,596	-		LRK53_RS05350	0.46	-0.0
1,252,610	+		LRK53_RS05350	0.48	-0.4
1,252,610	+		LRK53_RS05350	0.48	+0.6
1,252,610	+		LRK53_RS05350	0.48	-1.0
1,252,610	+		LRK53_RS05350	0.48	-1.0
1,252,610	+		LRK53_RS05350	0.48	-0.2
1,252,610	+		LRK53_RS05350	0.48	+1.0
1,252,610	+		LRK53_RS05350	0.48	+1.0
1,252,610	+		LRK53_RS05350	0.48	+0.6
1,252,611	-		LRK53_RS05350	0.48	-0.0
1,252,611	-		LRK53_RS05350	0.48	-0.4
1,252,611	-		LRK53_RS05350	0.48	-1.0
1,252,611	-		LRK53_RS05350	0.48	+1.0
1,252,611	-		LRK53_RS05350	0.48	-1.0
1,252,637	+		LRK53_RS05350	0.51	-0.9
1,252,637	+		LRK53_RS05350	0.51	-0.0
1,252,637	+		LRK53_RS05350	0.51	+1.0
1,252,637	+		LRK53_RS05350	0.51	+0.6
1,252,637	+		LRK53_RS05350	0.51	-0.0
1,252,637	+		LRK53_RS05350	0.51	-1.0
1,252,637	+		LRK53_RS05350	0.51	-0.0
1,252,637	+		LRK53_RS05350	0.51	-0.6
1,252,637	+		LRK53_RS05350	0.51	+1.0
1,252,637	+		LRK53_RS05350	0.51	+2.0
1,252,637	+		LRK53_RS05350	0.51	+0.2
1,252,637	+		LRK53_RS05350	0.51	-0.4
1,252,638	-		LRK53_RS05350	0.52	-1.0
1,252,638	-		LRK53_RS05350	0.52	+0.6
1,252,638	-		LRK53_RS05350	0.52	+0.4
1,252,936	+				-1.8
1,252,936	+				-0.7
1,252,937	-				-0.6
1,252,937	-				-0.5
1,253,078	+				-0.0
1,253,079	-				-0.9
1,253,136	+				-1.0
1,253,136	+				-1.2
1,253,136	+				-1.2
1,253,136	+				-1.0
1,253,320	+		LRK53_RS05355	0.51	+1.0
1,253,320	+		LRK53_RS05355	0.51	-1.8
1,253,320	+		LRK53_RS05355	0.51	-0.4
1,253,320	+		LRK53_RS05355	0.51	-1.8
1,253,320	+		LRK53_RS05355	0.51	-0.4
1,253,320	+		LRK53_RS05355	0.51	-1.5
1,253,320	+		LRK53_RS05355	0.51	-0.0
1,253,320	+		LRK53_RS05355	0.51	-1.6
1,253,320	+		LRK53_RS05355	0.51	-1.2
1,253,321	-		LRK53_RS05355	0.52	-2.2
1,253,321	-		LRK53_RS05355	0.52	-1.0
1,253,321	-		LRK53_RS05355	0.52	-0.6
1,253,321	-		LRK53_RS05355	0.52	-1.0
1,253,321	-		LRK53_RS05355	0.52	-0.4
1,253,541	+		LRK53_RS05360	0.46	+1.0
1,253,541	+		LRK53_RS05360	0.46	+1.0
1,253,541	+		LRK53_RS05360	0.46	-0.5
1,253,579	+		LRK53_RS05360	0.67	+0.6
1,253,579	+		LRK53_RS05360	0.67	-0.6
1,253,579	+		LRK53_RS05360	0.67	-0.0
1,253,580	-		LRK53_RS05360	0.67	+1.0
1,253,580	-		LRK53_RS05360	0.67	-0.0
1,253,665	-		LRK53_RS05365	0.16	-0.6
1,253,689	+		LRK53_RS05365	0.24	-1.4
1,253,689	+		LRK53_RS05365	0.24	+0.6
1,253,689	+		LRK53_RS05365	0.24	-0.0
1,253,689	+		LRK53_RS05365	0.24	-0.6
1,253,720	-		LRK53_RS05365	0.35	-0.6
1,253,720	-		LRK53_RS05365	0.35	-1.5
1,253,720	-		LRK53_RS05365	0.35	-0.2
1,253,745	+		LRK53_RS05365	0.44	-1.2
1,253,745	+		LRK53_RS05365	0.44	+0.5
1,253,745	+		LRK53_RS05365	0.44	-0.8
1,253,745	+		LRK53_RS05365	0.44	-0.0
1,253,745	+		LRK53_RS05365	0.44	+0.6
1,253,745	+		LRK53_RS05365	0.44	+0.4
1,253,745	+		LRK53_RS05365	0.44	+0.4
1,253,745	+		LRK53_RS05365	0.44	-0.8
1,253,745	+		LRK53_RS05365	0.44	-0.9
1,253,745	+		LRK53_RS05365	0.44	-0.6
1,253,745	+		LRK53_RS05365	0.44	+0.5
1,253,745	+		LRK53_RS05365	0.44	+1.0
1,253,745	+		LRK53_RS05365	0.44	-0.6
1,253,746	-		LRK53_RS05365	0.45	+1.0
1,253,773	+		LRK53_RS05365	0.54	-1.0
1,253,773	+		LRK53_RS05365	0.54	-0.0
1,253,773	+		LRK53_RS05365	0.54	-0.6
1,253,773	+		LRK53_RS05365	0.54	-1.2
1,253,773	+		LRK53_RS05365	0.54	-1.0
1,253,774	-		LRK53_RS05365	0.55	-0.5
1,253,774	-		LRK53_RS05365	0.55	-1.4
1,253,776	+		LRK53_RS05365	0.55	-1.4
1,253,776	+		LRK53_RS05365	0.55	-0.4
1,253,776	+		LRK53_RS05365	0.55	-0.6
1,253,776	+		LRK53_RS05365	0.55	-0.9
1,253,776	+		LRK53_RS05365	0.55	-1.0
1,253,776	+		LRK53_RS05365	0.55	-1.4
1,253,776	+		LRK53_RS05365	0.55	-0.8
1,253,776	+		LRK53_RS05365	0.55	-0.6
1,253,776	+		LRK53_RS05365	0.55	-1.4
1,253,777	-		LRK53_RS05365	0.56	-0.0
1,253,777	-		LRK53_RS05365	0.56	-0.6
1,253,777	-		LRK53_RS05365	0.56	-0.0
1,253,777	-		LRK53_RS05365	0.56	+0.6
1,253,777	-		LRK53_RS05365	0.56	+0.4
1,253,777	-		LRK53_RS05365	0.56	-0.1
1,253,777	-		LRK53_RS05365	0.56	+0.7
1,253,777	-		LRK53_RS05365	0.56	+1.2
1,253,777	-		LRK53_RS05365	0.56	-1.6
1,253,777	-		LRK53_RS05365	0.56	-1.0
1,253,777	-		LRK53_RS05365	0.56	+1.0
1,253,821	+		LRK53_RS05365	0.71	+0.7
1,253,821	+		LRK53_RS05365	0.71	-0.0
1,253,821	+		LRK53_RS05365	0.71	-0.6
1,253,821	+		LRK53_RS05365	0.71	-2.7
1,253,821	+		LRK53_RS05365	0.71	-1.5
1,253,821	+		LRK53_RS05365	0.71	-0.6
1,253,821	+		LRK53_RS05365	0.71	-0.8
1,253,821	+		LRK53_RS05365	0.71	-2.4
1,253,821	+		LRK53_RS05365	0.71	-0.6
1,253,822	-		LRK53_RS05365	0.72	-1.0
1,253,822	-		LRK53_RS05365	0.72	-0.7
1,253,822	-		LRK53_RS05365	0.72	+2.6
1,253,822	-		LRK53_RS05365	0.72	-0.8
1,253,822	-		LRK53_RS05365	0.72	-1.0
1,253,822	-		LRK53_RS05365	0.72	-2.5
1,253,822	-		LRK53_RS05365	0.72	+1.0
1,253,822	-		LRK53_RS05365	0.72	-0.6
1,253,822	-		LRK53_RS05365	0.72	+1.0
1,253,822	-		LRK53_RS05365	0.72	-1.0
1,253,822	-		LRK53_RS05365	0.72	-0.6
1,253,822	-		LRK53_RS05365	0.72	-0.6
1,253,824	+		LRK53_RS05365	0.72	-1.0
1,253,824	+		LRK53_RS05365	0.72	-0.0
1,253,824	+		LRK53_RS05365	0.72	-2.0
1,253,824	+		LRK53_RS05365	0.72	-0.6
1,253,824	+		LRK53_RS05365	0.72	+0.1
1,253,824	+		LRK53_RS05365	0.72	-0.6
1,254,020	+		LRK53_RS05370	0.31	+1.0
1,254,020	+		LRK53_RS05370	0.31	-0.6
1,254,020	+		LRK53_RS05370	0.31	-2.0
1,254,021	-		LRK53_RS05370	0.32	-0.8
1,254,021	-		LRK53_RS05370	0.32	-0.8
1,254,021	-		LRK53_RS05370	0.32	-0.2
1,254,021	-		LRK53_RS05370	0.32	-0.6
1,254,086	+		LRK53_RS05370	0.71	-0.0
1,254,211	+				-1.1
1,254,211	+				-0.0
1,254,211	+				-1.6
1,254,211	+				+1.7
1,254,212	-				+1.0
1,254,212	-				-1.0
1,254,212	-				-1.0
1,254,222	+				-0.6
1,254,223	-				-0.0
1,254,223	-				-0.0
1,254,234	+				-0.6
1,254,234	+				-0.4
1,254,234	+				-1.1
1,254,234	+				+1.0
1,254,234	+				+1.4
1,254,234	+				-0.9
1,254,234	+				-0.0
1,254,235	-				-0.4
1,254,235	-				+0.8
1,254,325	+				-1.0
1,254,326	-				-0.0
1,254,332	+				-0.0
1,254,332	+				-0.7
1,254,332	+				-0.0
1,254,332	+				-1.5
1,254,332	+				+1.0
1,254,332	+				-1.4
1,254,332	+				-1.4
1,254,332	+				-1.2
1,254,333	-				-0.6
1,254,333	-				+0.6
1,254,333	-				-1.1
1,254,333	-				-0.7
1,254,333	-				-1.8
1,254,333	-				-1.3
1,254,415	+		LRK53_RS05375	0.13	-0.8
1,254,415	+		LRK53_RS05375	0.13	+0.6
1,254,415	+		LRK53_RS05375	0.13	-1.4
1,254,415	+		LRK53_RS05375	0.13	-0.7
1,254,415	+		LRK53_RS05375	0.13	-0.0
1,254,415	+		LRK53_RS05375	0.13	-1.4
1,254,415	+		LRK53_RS05375	0.13	-0.4
1,254,433	+		LRK53_RS05375	0.17	-2.6
1,254,433	+		LRK53_RS05375	0.17	-0.5
1,254,433	+		LRK53_RS05375	0.17	-1.1
1,254,433	+		LRK53_RS05375	0.17	+1.0
1,254,433	+		LRK53_RS05375	0.17	-0.0
1,254,433	+		LRK53_RS05375	0.17	-0.4
1,254,433	+		LRK53_RS05375	0.17	-0.0
1,254,433	+		LRK53_RS05375	0.17	-0.6
1,254,433	+		LRK53_RS05375	0.17	-0.0
1,254,433	+		LRK53_RS05375	0.17	-1.8