Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04795

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,116,422	+		LRK53_RS04790	0.62	-0.0
1,116,422	+		LRK53_RS04790	0.62	+0.4
1,116,422	+		LRK53_RS04790	0.62	-0.0
1,116,422	+		LRK53_RS04790	0.62	+0.4
1,116,422	+		LRK53_RS04790	0.62	-1.0
1,116,422	+		LRK53_RS04790	0.62	-0.7
1,116,422	+		LRK53_RS04790	0.62	-0.4
1,116,422	+		LRK53_RS04790	0.62	-1.0
1,116,422	+		LRK53_RS04790	0.62	-0.8
1,116,422	+		LRK53_RS04790	0.62	-0.0
1,116,422	+		LRK53_RS04790	0.62	+0.4
1,116,422	+		LRK53_RS04790	0.62	+0.4
1,116,422	+		LRK53_RS04790	0.62	+0.2
1,116,422	+		LRK53_RS04790	0.62	-0.6
1,116,422	+		LRK53_RS04790	0.62	-1.0
1,116,422	+		LRK53_RS04790	0.62	-1.4
1,116,423	-		LRK53_RS04790	0.62	-0.8
1,116,423	-		LRK53_RS04790	0.62	-1.0
1,116,423	-		LRK53_RS04790	0.62	-0.9
1,116,423	-		LRK53_RS04790	0.62	-0.5
1,116,423	-		LRK53_RS04790	0.62	+0.4
1,116,423	-		LRK53_RS04790	0.62	-0.5
1,116,423	-		LRK53_RS04790	0.62	-0.3
1,116,423	-		LRK53_RS04790	0.62	-1.0
1,116,423	-		LRK53_RS04790	0.62	+0.5
1,116,423	-		LRK53_RS04790	0.62	+1.4
1,116,423	-		LRK53_RS04790	0.62	-1.0
1,116,423	-		LRK53_RS04790	0.62	-0.0
1,116,423	-		LRK53_RS04790	0.62	-0.8
1,116,597	+		LRK53_RS04790	0.76	-2.0
1,116,692	+		LRK53_RS04790	0.84	-0.0
1,116,692	+		LRK53_RS04790	0.84	-0.4
1,116,693	-		LRK53_RS04790	0.84	-0.0
1,116,693	-		LRK53_RS04790	0.84	-1.5
1,116,879	-				+1.0
1,117,817	+		LRK53_RS04795	0.76	-1.8
1,117,817	+		LRK53_RS04795	0.76	-0.6
1,117,817	+		LRK53_RS04795	0.76	-2.8
1,117,817	+		LRK53_RS04795	0.76	-1.0
1,117,817	+		LRK53_RS04795	0.76	-0.8
1,117,817	+		LRK53_RS04795	0.76	+0.5
1,117,817	+		LRK53_RS04795	0.76	+1.5
1,117,817	+		LRK53_RS04795	0.76	-1.4
1,117,817	+		LRK53_RS04795	0.76	-1.6
1,117,817	+		LRK53_RS04795	0.76	-1.0
1,117,817	+		LRK53_RS04795	0.76	+1.0
1,117,817	+		LRK53_RS04795	0.76	+0.4
1,117,860	-		LRK53_RS04795	0.80	-2.4
1,117,860	-		LRK53_RS04795	0.80	-1.6
1,118,091	-				-1.3
1,118,091	-				-0.8
1,118,091	-				-0.0
1,118,143	+				-0.6
1,118,173	+				-2.5
1,118,173	+				+0.0
1,118,173	+				-0.8
1,118,173	+				-1.0
1,118,173	+				+0.2
1,118,173	+				-2.2
1,118,174	-				-1.6
1,118,174	-				-0.0
1,118,174	-				-0.9
1,118,174	-				-0.5
1,118,174	-				-0.6
1,118,174	-				-1.8
1,118,174	-				+2.0
1,118,174	-				-1.0
1,118,191	+				-0.0
1,118,191	+				-0.6
1,118,191	+				-0.5
1,118,191	+				+1.4
1,118,191	+				-1.4
1,118,192	-				+1.5
1,118,192	-				-0.0
1,118,192	-				-0.6
1,118,192	-				-0.6
1,118,194	+				-0.0
1,118,194	+				-0.5
1,118,194	+				-0.3
1,118,194	+				-0.5
1,118,194	+				-0.2
1,118,195	-				-0.0
1,118,195	-				-0.0
1,118,195	-				+0.2
1,118,195	-				-1.8
1,118,195	-				-0.9
1,118,195	-				-0.9
1,118,195	-				-1.0
1,118,200	+				-0.6
1,118,201	-				-0.6
1,118,238	+				+0.4
1,118,239	-				-1.5
1,118,239	-				+0.2
1,118,444	+				-1.6
1,118,444	+				+1.0
1,118,445	-				-1.6
1,118,445	-				-0.4
1,118,455	+				-0.0
1,118,455	+				-0.3
1,118,456	-				-0.4
1,118,473	+				-1.0
1,118,473	+				-0.6
1,118,473	+				-1.0
1,118,473	+				-1.2
1,118,473	+				+1.0
1,118,473	+				-0.4
1,118,473	+				-1.6
1,118,473	+				+0.4
1,118,473	+				-1.1
1,118,473	+				+1.0
1,118,474	-				-0.5
1,118,474	-				+1.0
1,118,474	-				-2.2
1,118,474	-				-1.5
1,118,474	-				-0.4
1,118,475	+				-0.2
1,118,476	-				-0.0
1,118,476	-				-0.9
1,118,476	-				-0.0
1,118,476	-				+1.0
1,118,476	-				-0.0
1,118,476	-				+2.0
1,118,476	-				+0.5
1,118,476	-				-0.5
1,118,481	+				-1.0
1,118,481	+				-0.0
1,118,535	-				-1.0
1,118,588	-				-1.4
1,118,589	+				-0.6
1,118,590	-				-1.2
1,118,590	-				-1.7
1,118,590	-				-1.7
1,118,590	-				-0.6
1,118,620	-				-0.9
1,118,620	-				-2.0
1,118,625	+				-2.0
1,118,626	-				-1.5
1,118,626	-				-0.6
1,118,686	+				-1.0
1,118,687	-				+2.0
1,118,695	+				-0.4
1,118,695	+				+1.0
1,118,695	+				+0.4
1,118,696	-		LRK53_RS04800	0.10	+1.0
1,118,696	-		LRK53_RS04800	0.10	-1.1
1,118,696	-		LRK53_RS04800	0.10	-1.0
1,118,696	-		LRK53_RS04800	0.10	+1.0
1,118,717	+		LRK53_RS04800	0.12	+0.2
1,118,718	-		LRK53_RS04800	0.12	-0.0
1,118,718	-		LRK53_RS04800	0.12	-0.8
1,118,765	+		LRK53_RS04800	0.15	-1.4
1,118,767	+		LRK53_RS04800	0.15	+0.1
1,118,768	-		LRK53_RS04800	0.15	-1.0
1,118,768	-		LRK53_RS04800	0.15	+0.6
1,118,916	-		LRK53_RS04800	0.26	+1.0
1,118,916	-		LRK53_RS04800	0.26	-0.0
1,118,932	-		LRK53_RS04800	0.27	-1.0
1,118,952	+		LRK53_RS04800	0.29	+1.0
1,118,952	+		LRK53_RS04800	0.29	-1.4
1,118,953	-		LRK53_RS04800	0.29	-0.6
1,118,953	-		LRK53_RS04800	0.29	+0.1
1,118,953	-		LRK53_RS04800	0.29	+1.2
1,118,953	-		LRK53_RS04800	0.29	+1.0
1,118,953	-		LRK53_RS04800	0.29	-0.9
1,118,966	+		LRK53_RS04800	0.30	-1.4
1,118,999	-		LRK53_RS04800	0.32	+1.0
1,119,028	+		LRK53_RS04800	0.35	-2.0
1,119,062	-		LRK53_RS04800	0.37	+1.0
1,119,066	+		LRK53_RS04800	0.37	-1.4
1,119,067	-		LRK53_RS04800	0.37	-1.0