Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04500

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,044,994	+		LRK53_RS04495	0.23	-1.4
1,044,994	+		LRK53_RS04495	0.23	+0.4
1,044,994	+		LRK53_RS04495	0.23	-0.9
1,044,994	+		LRK53_RS04495	0.23	-0.6
1,044,995	-		LRK53_RS04495	0.23	-1.8
1,044,995	-		LRK53_RS04495	0.23	-2.2
1,044,995	-		LRK53_RS04495	0.23	+1.4
1,044,995	-		LRK53_RS04495	0.23	-1.0
1,044,995	-		LRK53_RS04495	0.23	+1.6
1,045,045	+		LRK53_RS04495	0.28	+1.0
1,045,045	+		LRK53_RS04495	0.28	-2.9
1,045,045	+		LRK53_RS04495	0.28	-1.8
1,045,045	+		LRK53_RS04495	0.28	-0.6
1,045,045	+		LRK53_RS04495	0.28	-1.0
1,045,045	+		LRK53_RS04495	0.28	+1.0
1,045,046	-		LRK53_RS04495	0.28	-0.8
1,045,046	-		LRK53_RS04495	0.28	-1.0
1,045,046	-		LRK53_RS04495	0.28	-0.8
1,045,046	-		LRK53_RS04495	0.28	-1.5
1,045,066	+		LRK53_RS04495	0.29	-1.7
1,045,182	-		LRK53_RS04495	0.40	+0.3
1,045,321	+		LRK53_RS04495	0.53	-1.6
1,045,321	+		LRK53_RS04495	0.53	-0.8
1,045,324	-		LRK53_RS04495	0.53	+1.0
1,045,801	+				+0.4
1,045,801	+				+1.0
1,045,801	+				-1.3
1,045,802	-				-0.0
1,045,860	+				-1.6
1,045,860	+				-0.3
1,045,860	+				+0.2
1,045,860	+				-0.9
1,045,860	+				-1.0
1,045,860	+				-0.6
1,045,860	+				-0.1
1,045,860	+				+0.1
1,045,860	+				+0.1
1,045,860	+				-0.3
1,045,861	-				-0.6
1,045,861	-				+1.0
1,045,861	-				-0.6
1,045,861	-				-1.1
1,045,885	+				-0.6
1,045,886	-				+2.6
1,046,017	+		LRK53_RS04500	0.21	+2.0
1,046,017	+		LRK53_RS04500	0.21	-2.0
1,046,017	+		LRK53_RS04500	0.21	+1.0
1,046,017	+		LRK53_RS04500	0.21	+1.0
1,046,018	-		LRK53_RS04500	0.21	-1.6
1,046,057	+		LRK53_RS04500	0.31	-0.8
1,046,057	+		LRK53_RS04500	0.31	-1.6
1,046,057	+		LRK53_RS04500	0.31	-0.3
1,046,057	+		LRK53_RS04500	0.31	+1.0
1,046,057	+		LRK53_RS04500	0.31	-0.6
1,046,057	+		LRK53_RS04500	0.31	-1.7
1,046,058	-		LRK53_RS04500	0.31	-1.6
1,046,058	-		LRK53_RS04500	0.31	-1.2
1,046,144	+		LRK53_RS04500	0.53	-0.6
1,046,144	+		LRK53_RS04500	0.53	+1.0
1,046,144	+		LRK53_RS04500	0.53	+0.4
1,046,144	+		LRK53_RS04500	0.53	+1.4
1,046,144	+		LRK53_RS04500	0.53	+2.0
1,046,144	+		LRK53_RS04500	0.53	-1.5
1,046,144	+		LRK53_RS04500	0.53	-2.9
1,046,144	+		LRK53_RS04500	0.53	-0.6
1,046,144	+		LRK53_RS04500	0.53	-0.0
1,046,144	+		LRK53_RS04500	0.53	-2.1
1,046,144	+		LRK53_RS04500	0.53	+1.0
1,046,144	+		LRK53_RS04500	0.53	+1.0
1,046,144	+		LRK53_RS04500	0.53	-1.3
1,046,144	+		LRK53_RS04500	0.53	-1.6
1,046,144	+		LRK53_RS04500	0.53	+0.1
1,046,144	+		LRK53_RS04500	0.53	-1.3
1,046,144	+		LRK53_RS04500	0.53	-2.7
1,046,144	+		LRK53_RS04500	0.53	-1.3
1,046,144	+		LRK53_RS04500	0.53	-2.2
1,046,144	+		LRK53_RS04500	0.53	+1.6
1,046,144	+		LRK53_RS04500	0.53	-1.2
1,046,144	+		LRK53_RS04500	0.53	-1.7
1,046,145	-		LRK53_RS04500	0.53	+1.0
1,046,145	-		LRK53_RS04500	0.53	-0.0
1,046,145	-		LRK53_RS04500	0.53	-0.6
1,046,145	-		LRK53_RS04500	0.53	-1.5
1,046,145	-		LRK53_RS04500	0.53	-1.8
1,046,145	-		LRK53_RS04500	0.53	-0.6
1,046,145	-		LRK53_RS04500	0.53	-0.6
1,046,145	-		LRK53_RS04500	0.53	-1.2
1,046,561	-				-1.0
1,046,719	+				+0.8
1,046,720	-				-1.4
1,046,731	-				+2.0
1,046,737	+				-0.6
1,046,761	-				+0.4
1,046,761	-				+0.2
1,046,764	-				-2.3
1,046,764	-				-1.6
1,046,781	+				-0.8
1,046,781	+				-1.6
1,046,904	+				+1.0
1,046,905	-				-1.0
1,046,954	+				-0.0
1,046,954	+				-1.8
1,046,954	+				-1.6
1,046,954	+				+1.6
1,046,954	+				-0.0
1,046,954	+				-0.2
1,046,955	-				+1.0
1,046,955	-				-1.0
1,046,955	-				+2.0
1,046,966	+		LRK53_RS04505	0.12	-0.8
1,046,966	+		LRK53_RS04505	0.12	+1.0
1,046,966	+		LRK53_RS04505	0.12	-0.6
1,046,966	+		LRK53_RS04505	0.12	-1.9
1,046,967	-		LRK53_RS04505	0.12	-1.0
1,046,967	-		LRK53_RS04505	0.12	-0.6
1,046,967	-		LRK53_RS04505	0.12	-1.8
1,046,967	-		LRK53_RS04505	0.12	-0.6
1,046,997	+		LRK53_RS04505	0.25	-1.7
1,046,997	+		LRK53_RS04505	0.25	-0.6