Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04315

Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Manganese (II) chloride tetrahydrate 2 mM
1,000,822	+		LRK53_RS04305	0.61	+0.4
1,000,822	+		LRK53_RS04305	0.61	-1.8
1,000,822	+		LRK53_RS04305	0.61	-0.5
1,000,823	-		LRK53_RS04305	0.61	+2.0
1,000,823	-		LRK53_RS04305	0.61	+3.0
1,000,823	-		LRK53_RS04305	0.61	-0.0
1,000,873	+		LRK53_RS04305	0.69	-1.2
1,000,873	+		LRK53_RS04305	0.69	+0.4
1,000,873	+		LRK53_RS04305	0.69	-1.0
1,000,873	+		LRK53_RS04305	0.69	-1.3
1,000,873	+		LRK53_RS04305	0.69	-0.6
1,000,873	+		LRK53_RS04305	0.69	+1.0
1,000,874	-		LRK53_RS04305	0.69	-2.0
1,000,874	-		LRK53_RS04305	0.69	-0.0
1,000,874	-		LRK53_RS04305	0.69	-0.0
1,000,874	-		LRK53_RS04305	0.69	-1.0
1,001,148	+				-1.0
1,001,148	+				-0.8
1,001,148	+				-1.0
1,001,152	+				-0.4
1,001,158	+				-0.9
1,001,158	+				-0.6
1,001,159	-				+2.0
1,001,159	-				+0.5
1,001,159	-				-0.2
1,001,247	+				-2.0
1,001,247	+				-0.8
1,001,247	+				-0.2
1,001,247	+				+0.1
1,001,247	+				-0.4
1,001,248	-				-0.0
1,001,248	-				-0.6
1,001,248	-				-1.3
1,001,248	-				-0.3
1,001,248	-				-1.0
1,001,248	-				-0.0
1,001,307	+				-0.6
1,001,307	+				+2.6
1,001,307	+				+0.1
1,001,307	+				+1.0
1,001,307	+				+0.3
1,001,307	+				+0.2
1,001,308	-				-1.0
1,001,308	-				-0.5
1,001,308	-				-0.0
1,001,308	-				-0.3
1,001,308	-				-1.1
1,001,308	-				-0.9
1,001,503	+		LRK53_RS04310	0.30	-0.0
1,001,503	+		LRK53_RS04310	0.30	+1.0
1,001,504	-		LRK53_RS04310	0.31	-0.7
1,001,504	-		LRK53_RS04310	0.31	-1.4
1,001,504	-		LRK53_RS04310	0.31	+1.0
1,001,749	-				-0.6
1,001,846	+				-0.0
1,001,846	+				-1.3
1,001,846	+				-0.0
1,001,846	+				-0.6
1,001,846	+				-0.0
1,001,846	+				-1.3
1,001,847	-				-1.9
1,001,847	-				-0.8
1,001,847	-				-1.6
1,001,847	-				-1.3
1,001,847	-				+1.0
1,002,183	+		LRK53_RS04315	0.27	-0.4
1,002,183	+		LRK53_RS04315	0.27	-0.2
1,002,184	-		LRK53_RS04315	0.27	+0.4
1,002,184	-		LRK53_RS04315	0.27	-0.0
1,002,184	-		LRK53_RS04315	0.27	-1.6
1,002,184	-		LRK53_RS04315	0.27	-0.6
1,002,184	-		LRK53_RS04315	0.27	-1.6
1,002,184	-		LRK53_RS04315	0.27	-1.4
1,002,184	-		LRK53_RS04315	0.27	+1.0
1,002,184	-		LRK53_RS04315	0.27	-1.7
1,002,184	-		LRK53_RS04315	0.27	+1.0
1,002,184	-		LRK53_RS04315	0.27	-1.6
1,002,184	-		LRK53_RS04315	0.27	-1.0
1,002,186	+		LRK53_RS04315	0.28	-0.0
1,002,186	+		LRK53_RS04315	0.28	-0.2
1,002,186	+		LRK53_RS04315	0.28	-2.3
1,002,186	+		LRK53_RS04315	0.28	-0.6
1,002,186	+		LRK53_RS04315	0.28	-1.0
1,002,186	+		LRK53_RS04315	0.28	+1.0
1,002,186	+		LRK53_RS04315	0.28	-1.0
1,002,186	+		LRK53_RS04315	0.28	-1.0
1,002,186	+		LRK53_RS04315	0.28	-0.6
1,002,186	+		LRK53_RS04315	0.28	-0.6
1,002,187	-		LRK53_RS04315	0.28	-0.0
1,002,187	-		LRK53_RS04315	0.28	-1.5
1,002,187	-		LRK53_RS04315	0.28	-0.6
1,002,187	-		LRK53_RS04315	0.28	-0.6
1,002,187	-		LRK53_RS04315	0.28	+1.6
1,002,187	-		LRK53_RS04315	0.28	-0.4
1,002,187	-		LRK53_RS04315	0.28	+1.0
1,002,187	-		LRK53_RS04315	0.28	-1.1
1,002,187	-		LRK53_RS04315	0.28	-1.3
1,002,187	-		LRK53_RS04315	0.28	-1.8
1,002,231	+		LRK53_RS04315	0.31	+1.0
1,002,231	+		LRK53_RS04315	0.31	-1.0
1,002,231	+		LRK53_RS04315	0.31	-0.6
1,002,231	+		LRK53_RS04315	0.31	+1.0
1,002,231	+		LRK53_RS04315	0.31	-1.3
1,002,232	-		LRK53_RS04315	0.31	-0.6
1,002,232	-		LRK53_RS04315	0.31	-1.6
1,002,232	-		LRK53_RS04315	0.31	-0.6
1,002,232	-		LRK53_RS04315	0.31	-0.4
1,002,447	+		LRK53_RS04315	0.47	+0.2
1,002,447	+		LRK53_RS04315	0.47	-0.6
1,002,447	+		LRK53_RS04315	0.47	-1.9
1,002,447	+		LRK53_RS04315	0.47	-0.6
1,002,447	+		LRK53_RS04315	0.47	-2.3
1,002,447	+		LRK53_RS04315	0.47	-0.6
1,002,447	+		LRK53_RS04315	0.47	-0.5
1,002,447	+		LRK53_RS04315	0.47	+1.0
1,002,447	+		LRK53_RS04315	0.47	+2.0
1,002,447	+		LRK53_RS04315	0.47	-1.1
1,002,447	+		LRK53_RS04315	0.47	-1.1
1,002,447	+		LRK53_RS04315	0.47	-1.0
1,002,447	+		LRK53_RS04315	0.47	-1.9
1,002,447	+		LRK53_RS04315	0.47	+0.2
1,002,448	-		LRK53_RS04315	0.47	+1.0
1,002,448	-		LRK53_RS04315	0.47	-1.6
1,002,448	-		LRK53_RS04315	0.47	-0.9
1,002,448	-		LRK53_RS04315	0.47	+1.0
1,002,448	-		LRK53_RS04315	0.47	+0.2
1,002,448	-		LRK53_RS04315	0.47	-0.6
1,002,448	-		LRK53_RS04315	0.47	-1.0
1,002,448	-		LRK53_RS04315	0.47	-0.0
1,002,448	-		LRK53_RS04315	0.47	-1.2
1,002,448	-		LRK53_RS04315	0.47	-0.6
1,002,448	-		LRK53_RS04315	0.47	-0.0
1,002,448	-		LRK53_RS04315	0.47	-1.9
1,002,448	-		LRK53_RS04315	0.47	+1.0
1,002,448	-		LRK53_RS04315	0.47	+1.7
1,002,448	-		LRK53_RS04315	0.47	-0.0
1,002,448	-		LRK53_RS04315	0.47	-0.8
1,002,448	-		LRK53_RS04315	0.47	+1.0
1,002,448	-		LRK53_RS04315	0.47	+0.4
1,002,448	-		LRK53_RS04315	0.47	-1.6
1,002,448	-		LRK53_RS04315	0.47	-1.0
1,002,448	-		LRK53_RS04315	0.47	+0.6
1,002,555	+		LRK53_RS04315	0.54	-0.0
1,002,555	+		LRK53_RS04315	0.54	-1.9
1,002,555	+		LRK53_RS04315	0.54	+1.0
1,002,555	+		LRK53_RS04315	0.54	-1.0
1,002,555	+		LRK53_RS04315	0.54	+1.0
1,002,555	+		LRK53_RS04315	0.54	-0.5
1,002,555	+		LRK53_RS04315	0.54	-1.6
1,002,555	+		LRK53_RS04315	0.54	+1.0
1,002,555	+		LRK53_RS04315	0.54	-0.5
1,002,555	+		LRK53_RS04315	0.54	-1.0
1,002,555	+		LRK53_RS04315	0.54	-1.0
1,002,556	-		LRK53_RS04315	0.55	-1.3
1,002,556	-		LRK53_RS04315	0.55	-1.9
1,002,556	-		LRK53_RS04315	0.55	-2.2
1,002,556	-		LRK53_RS04315	0.55	-1.0
1,002,556	-		LRK53_RS04315	0.55	-1.9
1,002,663	+		LRK53_RS04315	0.62	-0.0
1,002,726	+		LRK53_RS04315	0.67	-1.0
1,002,726	+		LRK53_RS04315	0.67	-2.0
1,002,726	+		LRK53_RS04315	0.67	-1.1
1,002,726	+		LRK53_RS04315	0.67	-2.0
1,002,726	+		LRK53_RS04315	0.67	-1.6
1,002,726	+		LRK53_RS04315	0.67	-0.0
1,002,726	+		LRK53_RS04315	0.67	+0.1
1,002,726	+		LRK53_RS04315	0.67	+1.0
1,002,726	+		LRK53_RS04315	0.67	-0.2
1,002,726	+		LRK53_RS04315	0.67	-1.0
1,002,726	+		LRK53_RS04315	0.67	-1.2
1,002,726	+		LRK53_RS04315	0.67	-0.6
1,002,726	+		LRK53_RS04315	0.67	-1.0
1,002,726	+		LRK53_RS04315	0.67	-0.0
1,002,726	+		LRK53_RS04315	0.67	-1.3
1,002,726	+		LRK53_RS04315	0.67	-0.6
1,002,726	+		LRK53_RS04315	0.67	+1.0
1,002,726	+		LRK53_RS04315	0.67	-1.3
1,002,726	+		LRK53_RS04315	0.67	-2.3
1,002,726	+		LRK53_RS04315	0.67	-1.6
1,002,726	+		LRK53_RS04315	0.67	-1.2
1,002,726	+		LRK53_RS04315	0.67	-0.6
1,002,726	+		LRK53_RS04315	0.67	-2.2
1,002,726	+		LRK53_RS04315	0.67	-1.3
1,002,726	+		LRK53_RS04315	0.67	-1.6
1,002,726	+		LRK53_RS04315	0.67	+1.0
1,002,726	+		LRK53_RS04315	0.67	+1.0
1,002,726	+		LRK53_RS04315	0.67	-1.8
1,002,726	+		LRK53_RS04315	0.67	-0.0
1,002,726	+		LRK53_RS04315	0.67	-1.8
1,002,727	-		LRK53_RS04315	0.67	-3.0
1,002,727	-		LRK53_RS04315	0.67	-2.5
1,002,727	-		LRK53_RS04315	0.67	-0.0
1,002,727	-		LRK53_RS04315	0.67	+1.0
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,727	-		LRK53_RS04315	0.67	-0.3
1,002,727	-		LRK53_RS04315	0.67	+0.6
1,002,727	-		LRK53_RS04315	0.67	-2.1
1,002,727	-		LRK53_RS04315	0.67	-0.6
1,002,727	-		LRK53_RS04315	0.67	-1.6
1,002,727	-		LRK53_RS04315	0.67	-0.6
1,002,727	-		LRK53_RS04315	0.67	-1.6
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,727	-		LRK53_RS04315	0.67	+0.2
1,002,727	-		LRK53_RS04315	0.67	-0.0
1,002,727	-		LRK53_RS04315	0.67	-0.0
1,002,727	-		LRK53_RS04315	0.67	-1.3
1,002,727	-		LRK53_RS04315	0.67	-0.0
1,002,727	-		LRK53_RS04315	0.67	+1.0
1,002,727	-		LRK53_RS04315	0.67	-1.8
1,002,727	-		LRK53_RS04315	0.67	+1.0
1,002,727	-		LRK53_RS04315	0.67	-1.7
1,002,741	+		LRK53_RS04315	0.68	-0.6
1,002,741	+		LRK53_RS04315	0.68	+1.0
1,002,741	+		LRK53_RS04315	0.68	-0.5
1,002,741	+		LRK53_RS04315	0.68	+0.4
1,002,741	+		LRK53_RS04315	0.68	-2.2
1,002,741	+		LRK53_RS04315	0.68	-1.8
1,002,741	+		LRK53_RS04315	0.68	-0.0
1,002,741	+		LRK53_RS04315	0.68	-0.8
1,002,741	+		LRK53_RS04315	0.68	-0.4
1,002,741	+		LRK53_RS04315	0.68	+2.6
1,002,741	+		LRK53_RS04315	0.68	-2.0
1,002,741	+		LRK53_RS04315	0.68	-1.3
1,002,741	+		LRK53_RS04315	0.68	-0.6
1,002,741	+		LRK53_RS04315	0.68	-0.6
1,002,741	+		LRK53_RS04315	0.68	-1.0
1,002,741	+		LRK53_RS04315	0.68	+2.0
1,002,741	+		LRK53_RS04315	0.68	-0.0
1,002,742	-		LRK53_RS04315	0.68	-1.5
1,002,742	-		LRK53_RS04315	0.68	-1.3
1,002,742	-		LRK53_RS04315	0.68	-0.0
1,002,742	-		LRK53_RS04315	0.68	-0.6
1,002,742	-		LRK53_RS04315	0.68	-0.0
1,002,742	-		LRK53_RS04315	0.68	-0.6
1,002,742	-		LRK53_RS04315	0.68	+1.0
1,002,742	-		LRK53_RS04315	0.68	-2.2
1,002,742	-		LRK53_RS04315	0.68	-1.2
1,002,742	-		LRK53_RS04315	0.68	-2.0
1,002,742	-		LRK53_RS04315	0.68	-0.0
1,002,742	-		LRK53_RS04315	0.68	-0.3
1,002,742	-		LRK53_RS04315	0.68	+1.0
1,002,742	-		LRK53_RS04315	0.68	-2.8
1,002,742	-		LRK53_RS04315	0.68	-1.5
1,002,742	-		LRK53_RS04315	0.68	-1.0
1,002,742	-		LRK53_RS04315	0.68	+0.4
1,002,750	+		LRK53_RS04315	0.69	-2.3
1,002,750	+		LRK53_RS04315	0.69	-0.8
1,002,751	-		LRK53_RS04315	0.69	+1.0
1,002,751	-		LRK53_RS04315	0.69	+0.4
1,002,751	-		LRK53_RS04315	0.69	-1.3
1,002,751	-		LRK53_RS04315	0.69	+0.4
1,002,751	-		LRK53_RS04315	0.69	-0.0
1,002,751	-		LRK53_RS04315	0.69	+0.6
1,002,876	+		LRK53_RS04315	0.78	-0.6
1,002,876	+		LRK53_RS04315	0.78	-0.0
1,002,876	+		LRK53_RS04315	0.78	-1.6
1,002,876	+		LRK53_RS04315	0.78	+1.0
1,002,876	+		LRK53_RS04315	0.78	-2.1
1,002,876	+		LRK53_RS04315	0.78	-1.5
1,002,876	+		LRK53_RS04315	0.78	-0.0
1,002,876	+		LRK53_RS04315	0.78	-2.3
1,002,877	-		LRK53_RS04315	0.78	-0.9
1,002,877	-		LRK53_RS04315	0.78	-0.6
1,002,877	-		LRK53_RS04315	0.78	+1.0
1,002,877	-		LRK53_RS04315	0.78	-2.2
1,002,877	-		LRK53_RS04315	0.78	-0.0
1,002,877	-		LRK53_RS04315	0.78	-0.4
1,002,877	-		LRK53_RS04315	0.78	-1.0
1,002,894	+		LRK53_RS04315	0.79	-0.6
1,002,894	+		LRK53_RS04315	0.79	-1.0
1,002,894	+		LRK53_RS04315	0.79	+0.7
1,002,894	+		LRK53_RS04315	0.79	-1.6
1,002,894	+		LRK53_RS04315	0.79	-0.8
1,002,894	+		LRK53_RS04315	0.79	-0.0
1,002,894	+		LRK53_RS04315	0.79	-0.6
1,002,894	+		LRK53_RS04315	0.79	-2.8
1,002,894	+		LRK53_RS04315	0.79	-0.8
1,002,894	+		LRK53_RS04315	0.79	-0.6
1,002,894	+		LRK53_RS04315	0.79	-1.6
1,002,894	+		LRK53_RS04315	0.79	-1.0
1,002,894	+		LRK53_RS04315	0.79	-1.8
1,002,895	-		LRK53_RS04315	0.79	-0.0
1,002,895	-		LRK53_RS04315	0.79	-1.3
1,002,895	-		LRK53_RS04315	0.79	-0.0
1,002,895	-		LRK53_RS04315	0.79	-1.5
1,002,895	-		LRK53_RS04315	0.79	+1.0
1,002,895	-		LRK53_RS04315	0.79	-0.5
1,002,895	-		LRK53_RS04315	0.79	-1.8
1,002,895	-		LRK53_RS04315	0.79	-1.1
1,003,070	-				+0.7
1,003,184	-				-0.7
1,003,227	+				-1.3
1,003,228	-				+1.6
1,003,246	+				-0.0
1,003,246	+				+1.0
1,003,246	+				-0.5
1,003,246	+				-0.6
1,003,246	+				+0.4
1,003,246	+				-0.7
1,003,246	+				+0.4
1,003,246	+				-0.6
1,003,246	+				+0.2
1,003,246	+				-1.6
1,003,246	+				-0.0
1,003,246	+				-1.5
1,003,246	+				-0.6
1,003,246	+				+0.1
1,003,246	+				-0.2
1,003,246	+				-0.9
1,003,246	+				-0.2
1,003,246	+				-1.0
1,003,246	+				-0.7
1,003,246	+				+0.4
1,003,246	+				-0.3
1,003,246	+				-1.0
1,003,246	+				-1.0
1,003,246	+				-0.0
1,003,246	+				-0.0
1,003,246	+				-0.3
1,003,246	+				-1.3
1,003,246	+				+1.0
1,003,246	+				-0.0
1,003,246	+				-3.1
1,003,246	+				-1.6
1,003,246	+				-1.1
1,003,246	+				+0.0
1,003,246	+				-0.6
1,003,246	+				+0.3
1,003,246	+				-0.4
1,003,246	+				-0.0
1,003,246	+				-0.0
1,003,246	+				-1.0
1,003,246	+				+1.0
1,003,246	+				-0.0
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1,003,958	-		LRK53_RS04320	0.26	-1.0