Experiment: G1M3_D4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_10255 and HUW76_10260 overlap by 14 nucleotides HUW76_10260 and HUW76_10265 are separated by 170 nucleotides HUW76_10265 and HUW76_10270 are separated by 2 nucleotides
HUW76_10255: HUW76_10255 - V-type ATP synthase subunit I, at 2,147,349 to 2,149,265
_10255
HUW76_10260: HUW76_10260 - hypothetical protein, at 2,149,252 to 2,149,578
_10260
HUW76_10265: HUW76_10265 - thiamine phosphate synthase, at 2,149,749 to 2,150,369
_10265
HUW76_10270: HUW76_10270 - 2-iminoacetate synthase ThiH, at 2,150,372 to 2,151,502
_10270
Position (kb)
2149
2150 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2148.260 kb on + strand, within HUW76_10255 at 2148.287 kb on + strand, within HUW76_10255 at 2148.287 kb on + strand, within HUW76_10255 at 2148.325 kb on - strand, within HUW76_10255 at 2148.325 kb on - strand, within HUW76_10255 at 2148.410 kb on - strand, within HUW76_10255 at 2148.420 kb on - strand, within HUW76_10255 at 2148.517 kb on + strand, within HUW76_10255 at 2148.517 kb on + strand, within HUW76_10255 at 2148.525 kb on + strand, within HUW76_10255 at 2148.525 kb on + strand, within HUW76_10255 at 2148.574 kb on - strand, within HUW76_10255 at 2148.606 kb on - strand, within HUW76_10255 at 2148.606 kb on - strand, within HUW76_10255 at 2148.708 kb on - strand, within HUW76_10255 at 2148.708 kb on - strand, within HUW76_10255 at 2148.708 kb on - strand, within HUW76_10255 at 2148.708 kb on - strand, within HUW76_10255 at 2148.723 kb on + strand, within HUW76_10255 at 2148.723 kb on + strand, within HUW76_10255 at 2148.724 kb on + strand, within HUW76_10255 at 2148.724 kb on + strand, within HUW76_10255 at 2148.724 kb on + strand, within HUW76_10255 at 2148.724 kb on + strand, within HUW76_10255 at 2148.724 kb on + strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.732 kb on - strand, within HUW76_10255 at 2148.772 kb on - strand, within HUW76_10255 at 2148.785 kb on - strand, within HUW76_10255 at 2148.787 kb on - strand, within HUW76_10255 at 2148.937 kb on + strand, within HUW76_10255 at 2148.937 kb on + strand, within HUW76_10255 at 2148.937 kb on + strand, within HUW76_10255 at 2148.937 kb on + strand, within HUW76_10255 at 2148.945 kb on - strand, within HUW76_10255 at 2148.945 kb on - strand, within HUW76_10255 at 2148.945 kb on - strand, within HUW76_10255 at 2148.945 kb on - strand, within HUW76_10255 at 2149.033 kb on + strand, within HUW76_10255 at 2149.402 kb on + strand, within HUW76_10260 at 2149.513 kb on - strand, within HUW76_10260 at 2149.569 kb on - strand at 2149.569 kb on - strand at 2149.582 kb on - strand at 2149.582 kb on - strand at 2149.632 kb on - strand at 2149.732 kb on - strand at 2149.782 kb on + strand at 2149.782 kb on + strand at 2149.789 kb on - strand at 2149.789 kb on - strand at 2149.891 kb on + strand, within HUW76_10265 at 2149.906 kb on - strand, within HUW76_10265 at 2149.929 kb on - strand, within HUW76_10265 at 2150.074 kb on - strand, within HUW76_10265 at 2150.074 kb on - strand, within HUW76_10265 at 2150.095 kb on - strand, within HUW76_10265 at 2150.406 kb on + strand at 2150.407 kb on + strand at 2150.484 kb on - strand at 2150.511 kb on + strand, within HUW76_10270 at 2150.511 kb on + strand, within HUW76_10270 at 2150.511 kb on + strand, within HUW76_10270 at 2150.514 kb on + strand, within HUW76_10270 at 2150.521 kb on - strand, within HUW76_10270 at 2150.528 kb on - strand, within HUW76_10270 at 2150.528 kb on - strand, within HUW76_10270
Per-strain Table
Position Strand Gene LocusTag Fraction G1M3_D4 remove 2,148,260 + HUW76_10255 0.48 +1.2 2,148,287 + HUW76_10255 0.49 -2.1 2,148,287 + HUW76_10255 0.49 -1.8 2,148,325 - HUW76_10255 0.51 +1.6 2,148,325 - HUW76_10255 0.51 -0.1 2,148,410 - HUW76_10255 0.55 -0.3 2,148,420 - HUW76_10255 0.56 -2.1 2,148,517 + HUW76_10255 0.61 -1.7 2,148,517 + HUW76_10255 0.61 -1.0 2,148,525 + HUW76_10255 0.61 +0.4 2,148,525 + HUW76_10255 0.61 -0.0 2,148,574 - HUW76_10255 0.64 -0.2 2,148,606 - HUW76_10255 0.66 -1.8 2,148,606 - HUW76_10255 0.66 +0.2 2,148,708 - HUW76_10255 0.71 +2.1 2,148,708 - HUW76_10255 0.71 -0.9 2,148,708 - HUW76_10255 0.71 +0.2 2,148,708 - HUW76_10255 0.71 -0.3 2,148,723 + HUW76_10255 0.72 +0.3 2,148,723 + HUW76_10255 0.72 +0.5 2,148,724 + HUW76_10255 0.72 +0.6 2,148,724 + HUW76_10255 0.72 -0.5 2,148,724 + HUW76_10255 0.72 -1.9 2,148,724 + HUW76_10255 0.72 -0.9 2,148,724 + HUW76_10255 0.72 +0.6 2,148,732 - HUW76_10255 0.72 +0.7 2,148,732 - HUW76_10255 0.72 -1.3 2,148,732 - HUW76_10255 0.72 -0.3 2,148,732 - HUW76_10255 0.72 +0.6 2,148,732 - HUW76_10255 0.72 -2.7 2,148,732 - HUW76_10255 0.72 -1.2 2,148,732 - HUW76_10255 0.72 +0.8 2,148,732 - HUW76_10255 0.72 +0.4 2,148,732 - HUW76_10255 0.72 +0.1 2,148,732 - HUW76_10255 0.72 -2.8 2,148,732 - HUW76_10255 0.72 -1.0 2,148,732 - HUW76_10255 0.72 -0.9 2,148,732 - HUW76_10255 0.72 -0.9 2,148,772 - HUW76_10255 0.74 +2.0 2,148,785 - HUW76_10255 0.75 +2.6 2,148,787 - HUW76_10255 0.75 -0.8 2,148,937 + HUW76_10255 0.83 +0.5 2,148,937 + HUW76_10255 0.83 +0.0 2,148,937 + HUW76_10255 0.83 -1.0 2,148,937 + HUW76_10255 0.83 +0.4 2,148,945 - HUW76_10255 0.83 -1.9 2,148,945 - HUW76_10255 0.83 +0.2 2,148,945 - HUW76_10255 0.83 +1.4 2,148,945 - HUW76_10255 0.83 -1.7 2,149,033 + HUW76_10255 0.88 +0.1 2,149,402 + HUW76_10260 0.46 +0.1 2,149,513 - HUW76_10260 0.80 -0.2 2,149,569 - -1.2 2,149,569 - +1.9 2,149,582 - -2.5 2,149,582 - -0.1 2,149,632 - +0.9 2,149,732 - +0.7 2,149,782 + +2.3 2,149,782 + -0.3 2,149,789 - -0.5 2,149,789 - -0.8 2,149,891 + HUW76_10265 0.23 +0.2 2,149,906 - HUW76_10265 0.25 -1.5 2,149,929 - HUW76_10265 0.29 +0.2 2,150,074 - HUW76_10265 0.52 -1.4 2,150,074 - HUW76_10265 0.52 -0.4 2,150,095 - HUW76_10265 0.56 +0.3 2,150,406 + -0.6 2,150,407 + -1.5 2,150,484 - -0.2 2,150,511 + HUW76_10270 0.12 -0.9 2,150,511 + HUW76_10270 0.12 +0.8 2,150,511 + HUW76_10270 0.12 +1.2 2,150,514 + HUW76_10270 0.13 -0.7 2,150,521 - HUW76_10270 0.13 -0.1 2,150,528 - HUW76_10270 0.14 -1.0 2,150,528 - HUW76_10270 0.14 +1.1
Or see this region's nucleotide sequence