Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_00510

Experiment: G1M3_D4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHUW76_00505 and HUW76_00510 are separated by 326 nucleotidesHUW76_00510 and HUW76_00515 overlap by 1 nucleotides HUW76_00505: HUW76_00505 - ferredoxin--NADP reductase, at 100,365 to 101,039 _00505 HUW76_00510: HUW76_00510 - glutaredoxin family protein, at 101,366 to 101,569 _00510 HUW76_00515: HUW76_00515 - ribonucleoside-diphosphate reductase subunit alpha, at 101,569 to 103,836 _00515 Position (kb) 101 102Strain fitness (log2 ratio) -1 0 1at 100.523 kb on + strand, within HUW76_00505at 100.524 kb on - strand, within HUW76_00505at 100.524 kb on - strand, within HUW76_00505at 100.531 kb on - strand, within HUW76_00505at 100.618 kb on + strand, within HUW76_00505at 100.618 kb on + strand, within HUW76_00505at 100.626 kb on - strand, within HUW76_00505at 100.633 kb on + strand, within HUW76_00505at 100.755 kb on + strand, within HUW76_00505at 100.768 kb on - strand, within HUW76_00505at 100.822 kb on - strand, within HUW76_00505at 100.822 kb on - strand, within HUW76_00505at 100.875 kb on - strand, within HUW76_00505at 100.881 kb on - strand, within HUW76_00505at 100.881 kb on - strand, within HUW76_00505at 100.929 kb on + strand, within HUW76_00505at 100.992 kb on - strandat 100.996 kb on + strandat 100.996 kb on + strandat 101.050 kb on + strandat 101.347 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction G1M3_D4
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100,523 + HUW76_00505 0.23 +0.6
100,524 - HUW76_00505 0.24 -1.5
100,524 - HUW76_00505 0.24 -1.6
100,531 - HUW76_00505 0.25 -0.9
100,618 + HUW76_00505 0.37 +0.3
100,618 + HUW76_00505 0.37 +1.0
100,626 - HUW76_00505 0.39 -1.0
100,633 + HUW76_00505 0.40 -0.6
100,755 + HUW76_00505 0.58 -0.1
100,768 - HUW76_00505 0.60 +0.3
100,822 - HUW76_00505 0.68 +0.9
100,822 - HUW76_00505 0.68 -0.7
100,875 - HUW76_00505 0.76 +0.7
100,881 - HUW76_00505 0.76 -0.8
100,881 - HUW76_00505 0.76 +0.3
100,929 + HUW76_00505 0.84 +1.3
100,992 - +0.4
100,996 + -1.0
100,996 + -1.0
101,050 + -0.1
101,347 + -1.2

Or see this region's nucleotide sequence