Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS18050

Experiment: R2A_PIPES with Cobalt chloride 1024 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cobalt chloride 1024 uM
3,969,179	-		LRK53_RS18035	0.50	-0.2
3,969,190	+		LRK53_RS18035	0.52	-1.5
3,969,191	-		LRK53_RS18035	0.52	+0.1
3,969,213	-		LRK53_RS18035	0.57	-1.6
3,969,221	+		LRK53_RS18035	0.59	+1.1
3,969,222	-		LRK53_RS18035	0.59	-0.5
3,969,236	+		LRK53_RS18035	0.62	-0.2
3,969,236	+		LRK53_RS18035	0.62	-0.9
3,969,329	+		LRK53_RS18035	0.81	-1.1
3,969,354	+		LRK53_RS18035	0.86	-1.2
3,969,440	-				-1.2
3,969,461	+				-0.1
3,969,486	-		LRK53_RS18040	0.18	-0.7
3,969,606	+		LRK53_RS18040	0.56	+0.1
3,969,683	+		LRK53_RS18040	0.81	-0.5
3,969,683	+		LRK53_RS18040	0.81	-0.2
3,969,683	+		LRK53_RS18040	0.81	-0.6
3,969,683	+		LRK53_RS18040	0.81	-1.7
3,969,683	+		LRK53_RS18040	0.81	+1.1
3,969,683	+		LRK53_RS18040	0.81	-0.2
3,969,683	+		LRK53_RS18040	0.81	-0.4
3,969,684	-		LRK53_RS18040	0.81	+0.5
3,969,684	-		LRK53_RS18040	0.81	+0.1
3,969,686	+		LRK53_RS18040	0.82	+0.2
3,969,686	+		LRK53_RS18040	0.82	-1.4
3,969,686	+		LRK53_RS18040	0.82	+0.7
3,969,686	+		LRK53_RS18040	0.82	-0.9
3,969,686	+		LRK53_RS18040	0.82	-1.4
3,969,687	-		LRK53_RS18040	0.82	-1.2
3,969,687	-		LRK53_RS18040	0.82	-0.9
3,969,687	-		LRK53_RS18040	0.82	-0.9
3,969,746	+				+0.4
3,969,746	+				-0.9
3,969,814	+				-0.9
3,969,815	-				+1.8
3,969,815	-				-0.7
3,969,815	-				+1.1
3,969,822	+				-0.5
3,969,822	+				+0.1
3,969,822	+				-0.3
3,969,822	+				+1.1
3,969,822	+				-0.1
3,969,822	+				+0.1
3,969,823	-				-0.2
3,969,823	-				+0.1
3,969,823	-				+1.1
3,969,823	-				-0.5
3,969,823	-				+0.3
3,969,823	-				+1.8
3,969,852	+				-0.5
3,969,853	-				-1.2
3,969,853	-				-0.7
3,969,917	+		LRK53_RS18045	0.29	-0.2
3,969,917	+		LRK53_RS18045	0.29	-1.2
3,969,917	+		LRK53_RS18045	0.29	+0.5
3,969,917	+		LRK53_RS18045	0.29	-1.7
3,969,917	+		LRK53_RS18045	0.29	-0.5
3,969,918	-		LRK53_RS18045	0.30	-0.9
3,969,918	-		LRK53_RS18045	0.30	-0.6
3,969,946	+		LRK53_RS18045	0.41	-0.9
3,969,946	+		LRK53_RS18045	0.41	-1.1
3,969,947	-		LRK53_RS18045	0.42	+0.7
3,970,067	+				-0.9
3,970,087	-				-0.7
3,970,123	+				-1.7
3,970,123	+				-1.2
3,970,142	+				-1.0
3,970,142	+				-0.3
3,970,142	+				+0.5
3,970,142	+				+0.1
3,970,143	-				+0.1
3,970,143	-				-1.5
3,970,143	-				-0.1
3,970,153	+				-0.5
3,970,165	+				+2.7
3,970,165	+				-0.1
3,970,165	+				+0.1
3,970,165	+				+0.7
3,970,165	+				+0.1
3,970,165	+				-0.7
3,970,165	+				-0.9
3,970,165	+				-0.7
3,970,165	+				+1.1
3,970,165	+				-1.6
3,970,166	-				-2.5
3,970,166	-				+0.4
3,970,166	-				+0.1
3,970,166	-				-0.2
3,970,166	-				-1.3
3,970,166	-				+0.1
3,970,166	-				-0.5
3,970,184	+				-0.2
3,970,184	+				+1.1
3,970,184	+				-2.7
3,970,184	+				+1.1
3,970,184	+				+0.8
3,970,184	+				-0.5
3,970,185	-				+0.1
3,970,185	-				+1.7
3,970,185	-				-0.5
3,970,185	-				+0.1
3,970,185	-				-0.1
3,970,185	-				+0.1
3,970,275	+		LRK53_RS18050	0.15	-0.9
3,970,275	+		LRK53_RS18050	0.15	-0.9
3,970,275	+		LRK53_RS18050	0.15	-1.2
3,970,275	+		LRK53_RS18050	0.15	-0.6
3,970,275	+		LRK53_RS18050	0.15	+0.1
3,970,275	+		LRK53_RS18050	0.15	-0.9
3,970,275	+		LRK53_RS18050	0.15	-2.1
3,970,275	+		LRK53_RS18050	0.15	+0.1
3,970,275	+		LRK53_RS18050	0.15	-1.5
3,970,275	+		LRK53_RS18050	0.15	+1.1
3,970,276	-		LRK53_RS18050	0.15	+0.1
3,970,276	-		LRK53_RS18050	0.15	-0.5
3,970,276	-		LRK53_RS18050	0.15	-0.5
3,970,276	-		LRK53_RS18050	0.15	-2.5
3,970,276	-		LRK53_RS18050	0.15	+0.3
3,970,629	+		LRK53_RS18050	0.62	+0.1
3,970,629	+		LRK53_RS18050	0.62	-0.7
3,970,629	+		LRK53_RS18050	0.62	-2.1
3,970,629	+		LRK53_RS18050	0.62	-1.2
3,970,630	-		LRK53_RS18050	0.63	-0.7
3,970,831	+		LRK53_RS18050	0.89	-1.2
3,970,831	+		LRK53_RS18050	0.89	-0.9
3,970,831	+		LRK53_RS18050	0.89	-0.8
3,970,831	+		LRK53_RS18050	0.89	+1.1
3,970,831	+		LRK53_RS18050	0.89	+0.5
3,970,832	-		LRK53_RS18050	0.89	-1.4
3,970,832	-		LRK53_RS18050	0.89	+0.3
3,970,832	-		LRK53_RS18050	0.89	-0.9
3,970,951	+				+0.1
3,970,957	+				-0.7
3,970,957	+				+1.1
3,970,957	+				+1.1
3,970,957	+				-0.7
3,970,957	+				-1.2
3,970,957	+				-1.1
3,970,957	+				-0.9
3,970,957	+				-0.2
3,970,958	-				+2.1
3,970,958	-				-0.5
3,970,958	-				-0.5
3,970,977	+				+1.1
3,970,978	-				-0.5
3,971,069	+		LRK53_RS18055	0.16	-1.4
3,971,069	+		LRK53_RS18055	0.16	-0.2
3,971,135	+		LRK53_RS18055	0.29	-0.9
3,971,135	+		LRK53_RS18055	0.29	-1.5
3,971,135	+		LRK53_RS18055	0.29	-0.2
3,971,135	+		LRK53_RS18055	0.29	+0.7
3,971,135	+		LRK53_RS18055	0.29	-0.2
3,971,135	+		LRK53_RS18055	0.29	-1.0
3,971,136	-		LRK53_RS18055	0.29	+0.1
3,971,136	-		LRK53_RS18055	0.29	+2.7
3,971,136	-		LRK53_RS18055	0.29	-0.9
3,971,136	-		LRK53_RS18055	0.29	-0.5
3,971,136	-		LRK53_RS18055	0.29	+1.1
3,971,155	+		LRK53_RS18055	0.32	-1.7
3,971,155	+		LRK53_RS18055	0.32	-0.5
3,971,155	+		LRK53_RS18055	0.32	-0.7
3,971,156	-		LRK53_RS18055	0.32	-0.5
3,971,156	-		LRK53_RS18055	0.32	-0.4
3,971,156	-		LRK53_RS18055	0.32	-0.5
3,971,156	-		LRK53_RS18055	0.32	+0.2
3,971,156	-		LRK53_RS18055	0.32	+1.1
3,971,156	-		LRK53_RS18055	0.32	+1.1
3,971,156	-		LRK53_RS18055	0.32	-0.2
3,971,156	-		LRK53_RS18055	0.32	+0.2
3,971,156	-		LRK53_RS18055	0.32	+0.1
3,971,156	-		LRK53_RS18055	0.32	+0.6
3,971,236	+		LRK53_RS18055	0.47	+1.1
3,971,236	+		LRK53_RS18055	0.47	-0.5
3,971,236	+		LRK53_RS18055	0.47	-1.2
3,971,237	-		LRK53_RS18055	0.47	-1.4
3,971,302	+		LRK53_RS18055	0.59	+1.1
3,971,302	+		LRK53_RS18055	0.59	-0.9
3,971,302	+		LRK53_RS18055	0.59	-1.0
3,971,303	-		LRK53_RS18055	0.60	-2.1
3,971,342	-		LRK53_RS18055	0.67	+0.5
3,971,444	+		LRK53_RS18055	0.86	+0.1
3,971,444	+		LRK53_RS18055	0.86	-2.7
3,971,444	+		LRK53_RS18055	0.86	+0.5
3,971,444	+		LRK53_RS18055	0.86	-0.7
3,971,445	-		LRK53_RS18055	0.86	-1.2
3,971,445	-		LRK53_RS18055	0.86	-1.2
3,971,724	+				-0.5
3,971,725	-				-1.5
3,971,760	-		LRK53_RS18060	0.16	-0.7
3,971,769	+		LRK53_RS18060	0.17	-0.9
3,971,822	+		LRK53_RS18060	0.26	-1.5
3,971,822	+		LRK53_RS18060	0.26	+1.1
3,971,822	+		LRK53_RS18060	0.26	+2.1
3,971,822	+		LRK53_RS18060	0.26	+0.4
3,971,822	+		LRK53_RS18060	0.26	+0.1
3,971,823	-		LRK53_RS18060	0.27	-0.7
3,971,823	-		LRK53_RS18060	0.27	+2.1
3,971,823	-		LRK53_RS18060	0.27	-1.7