Experiment: R2A_PIPES with Cobalt chloride 1024 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS07055 and LRK53_RS07060 overlap by 1 nucleotides LRK53_RS07060 and LRK53_RS07065 are separated by 42 nucleotides LRK53_RS07065 and LRK53_RS07070 are separated by 5 nucleotides LRK53_RS07070 and LRK53_RS07075 are separated by 102 nucleotides
LRK53_RS07055: LRK53_RS07055 - M1 family metallopeptidase, at 1,588,504 to 1,590,726
_RS07055
LRK53_RS07060: LRK53_RS07060 - hypothetical protein, at 1,590,726 to 1,591,646
_RS07060
LRK53_RS07065: LRK53_RS07065 - GNAT family N-acetyltransferase, at 1,591,689 to 1,592,228
_RS07065
LRK53_RS07070: LRK53_RS07070 - SET domain-containing protein, at 1,592,234 to 1,592,707
_RS07070
LRK53_RS07075: LRK53_RS07075 - helix-hairpin-helix domain-containing protein, at 1,592,810 to 1,593,163
_RS07075
Position (kb) 1591
1592
1593 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1590.703 kb on + strand at 1590.703 kb on + strand at 1591.073 kb on + strand, within LRK53_RS07060 at 1591.073 kb on + strand, within LRK53_RS07060 at 1591.073 kb on + strand, within LRK53_RS07060 at 1591.116 kb on + strand, within LRK53_RS07060 at 1591.117 kb on - strand, within LRK53_RS07060 at 1591.117 kb on - strand, within LRK53_RS07060 at 1591.158 kb on + strand, within LRK53_RS07060 at 1591.419 kb on + strand, within LRK53_RS07060 at 1591.419 kb on + strand, within LRK53_RS07060 at 1591.419 kb on + strand, within LRK53_RS07060 at 1591.419 kb on + strand, within LRK53_RS07060 at 1591.419 kb on + strand, within LRK53_RS07060 at 1591.420 kb on - strand, within LRK53_RS07060 at 1591.420 kb on - strand, within LRK53_RS07060 at 1591.420 kb on - strand, within LRK53_RS07060 at 1591.420 kb on - strand, within LRK53_RS07060 at 1591.420 kb on - strand, within LRK53_RS07060 at 1591.444 kb on - strand, within LRK53_RS07060 at 1591.575 kb on + strand at 1591.575 kb on + strand at 1591.575 kb on + strand at 1591.576 kb on - strand at 1591.576 kb on - strand at 1591.576 kb on - strand at 1591.576 kb on - strand at 1591.576 kb on - strand at 1591.576 kb on - strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.644 kb on + strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.645 kb on - strand at 1591.696 kb on + strand at 1591.696 kb on + strand at 1591.697 kb on - strand at 1591.697 kb on - strand at 1591.726 kb on + strand at 1591.726 kb on + strand at 1591.726 kb on + strand at 1591.727 kb on - strand at 1591.727 kb on - strand at 1591.727 kb on - strand at 1591.727 kb on - strand at 1591.729 kb on + strand at 1591.729 kb on + strand at 1591.729 kb on + strand at 1591.729 kb on + strand at 1591.729 kb on + strand at 1591.729 kb on + strand at 1591.730 kb on - strand at 1591.730 kb on - strand at 1591.730 kb on - strand at 1591.730 kb on - strand at 1591.730 kb on - strand at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.756 kb on + strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.757 kb on - strand, within LRK53_RS07065 at 1591.907 kb on - strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.972 kb on + strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1591.973 kb on - strand, within LRK53_RS07065 at 1592.156 kb on - strand, within LRK53_RS07065 at 1592.376 kb on + strand, within LRK53_RS07070 at 1592.376 kb on + strand, within LRK53_RS07070 at 1592.377 kb on - strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.472 kb on + strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.473 kb on - strand, within LRK53_RS07070 at 1592.505 kb on + strand, within LRK53_RS07070 at 1592.505 kb on + strand, within LRK53_RS07070 at 1592.506 kb on - strand, within LRK53_RS07070 at 1592.506 kb on - strand, within LRK53_RS07070 at 1592.740 kb on + strand at 1592.741 kb on - strand at 1592.811 kb on + strand at 1592.811 kb on + strand at 1592.811 kb on + strand at 1592.811 kb on + strand at 1592.811 kb on + strand at 1592.812 kb on - strand at 1592.812 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cobalt chloride 1024 uM remove 1,590,703 + -1.1 1,590,703 + -0.7 1,591,073 + LRK53_RS07060 0.38 +0.6 1,591,073 + LRK53_RS07060 0.38 +2.4 1,591,073 + LRK53_RS07060 0.38 -1.3 1,591,116 + LRK53_RS07060 0.42 +0.9 1,591,117 - LRK53_RS07060 0.42 -0.3 1,591,117 - LRK53_RS07060 0.42 -1.4 1,591,158 + LRK53_RS07060 0.47 -0.6 1,591,419 + LRK53_RS07060 0.75 -0.1 1,591,419 + LRK53_RS07060 0.75 +0.9 1,591,419 + LRK53_RS07060 0.75 -0.3 1,591,419 + LRK53_RS07060 0.75 -0.8 1,591,419 + LRK53_RS07060 0.75 -0.9 1,591,420 - LRK53_RS07060 0.75 +2.9 1,591,420 - LRK53_RS07060 0.75 -0.1 1,591,420 - LRK53_RS07060 0.75 +0.7 1,591,420 - LRK53_RS07060 0.75 -1.4 1,591,420 - LRK53_RS07060 0.75 -1.1 1,591,444 - LRK53_RS07060 0.78 -0.3 1,591,575 + +0.5 1,591,575 + -1.4 1,591,575 + -0.1 1,591,576 - -1.3 1,591,576 - -1.4 1,591,576 - +1.3 1,591,576 - +0.9 1,591,576 - +0.3 1,591,576 - -0.8 1,591,644 + -1.2 1,591,644 + +0.7 1,591,644 + +0.9 1,591,644 + -0.7 1,591,644 + +0.9 1,591,644 + -0.7 1,591,644 + -2.0 1,591,644 + -2.1 1,591,644 + -1.4 1,591,644 + -0.7 1,591,644 + -1.6 1,591,644 + -0.7 1,591,644 + -1.9 1,591,645 - +0.6 1,591,645 - +0.2 1,591,645 - -1.9 1,591,645 - -1.7 1,591,645 - -0.7 1,591,645 - -0.7 1,591,645 - -1.7 1,591,645 - -1.1 1,591,696 + -0.6 1,591,696 + -1.0 1,591,697 - -1.2 1,591,697 - -0.4 1,591,726 + -1.5 1,591,726 + -0.9 1,591,726 + -1.1 1,591,727 - -0.7 1,591,727 - -0.1 1,591,727 - -1.3 1,591,727 - +0.6 1,591,729 + -1.5 1,591,729 + -0.6 1,591,729 + -1.9 1,591,729 + -0.8 1,591,729 + -1.3 1,591,729 + -0.3 1,591,730 - -0.7 1,591,730 - -0.6 1,591,730 - -0.5 1,591,730 - -1.2 1,591,730 - -1.9 1,591,756 + LRK53_RS07065 0.12 -1.0 1,591,756 + LRK53_RS07065 0.12 -0.1 1,591,756 + LRK53_RS07065 0.12 -1.1 1,591,756 + LRK53_RS07065 0.12 -0.8 1,591,756 + LRK53_RS07065 0.12 -0.7 1,591,756 + LRK53_RS07065 0.12 -1.4 1,591,756 + LRK53_RS07065 0.12 +1.3 1,591,756 + LRK53_RS07065 0.12 +0.5 1,591,756 + LRK53_RS07065 0.12 -0.5 1,591,756 + LRK53_RS07065 0.12 -0.5 1,591,756 + LRK53_RS07065 0.12 -0.6 1,591,756 + LRK53_RS07065 0.12 -0.5 1,591,756 + LRK53_RS07065 0.12 -0.5 1,591,757 - LRK53_RS07065 0.13 -0.8 1,591,757 - LRK53_RS07065 0.13 +0.9 1,591,757 - LRK53_RS07065 0.13 +0.9 1,591,757 - LRK53_RS07065 0.13 +1.9 1,591,757 - LRK53_RS07065 0.13 +0.9 1,591,757 - LRK53_RS07065 0.13 -0.4 1,591,757 - LRK53_RS07065 0.13 +0.9 1,591,757 - LRK53_RS07065 0.13 -1.0 1,591,757 - LRK53_RS07065 0.13 -0.6 1,591,757 - LRK53_RS07065 0.13 +0.1 1,591,757 - LRK53_RS07065 0.13 +0.3 1,591,757 - LRK53_RS07065 0.13 -0.7 1,591,757 - LRK53_RS07065 0.13 +0.1 1,591,907 - LRK53_RS07065 0.40 -1.0 1,591,972 + LRK53_RS07065 0.52 +1.5 1,591,972 + LRK53_RS07065 0.52 -0.9 1,591,972 + LRK53_RS07065 0.52 -1.3 1,591,972 + LRK53_RS07065 0.52 -0.8 1,591,972 + LRK53_RS07065 0.52 -1.9 1,591,972 + LRK53_RS07065 0.52 +1.5 1,591,972 + LRK53_RS07065 0.52 -0.9 1,591,972 + LRK53_RS07065 0.52 -0.6 1,591,973 - LRK53_RS07065 0.53 -1.0 1,591,973 - LRK53_RS07065 0.53 -0.6 1,591,973 - LRK53_RS07065 0.53 -0.7 1,591,973 - LRK53_RS07065 0.53 +1.9 1,591,973 - LRK53_RS07065 0.53 -1.5 1,591,973 - LRK53_RS07065 0.53 -0.8 1,591,973 - LRK53_RS07065 0.53 -0.2 1,591,973 - LRK53_RS07065 0.53 -1.5 1,592,156 - LRK53_RS07065 0.86 +0.0 1,592,376 + LRK53_RS07070 0.30 +0.9 1,592,376 + LRK53_RS07070 0.30 +0.9 1,592,377 - LRK53_RS07070 0.30 -0.0 1,592,472 + LRK53_RS07070 0.50 -0.1 1,592,472 + LRK53_RS07070 0.50 -1.2 1,592,472 + LRK53_RS07070 0.50 -0.1 1,592,472 + LRK53_RS07070 0.50 -1.9 1,592,472 + LRK53_RS07070 0.50 -0.1 1,592,472 + LRK53_RS07070 0.50 -1.2 1,592,472 + LRK53_RS07070 0.50 -0.9 1,592,472 + LRK53_RS07070 0.50 -1.0 1,592,472 + LRK53_RS07070 0.50 -1.0 1,592,472 + LRK53_RS07070 0.50 +0.9 1,592,472 + LRK53_RS07070 0.50 -0.2 1,592,472 + LRK53_RS07070 0.50 -0.1 1,592,472 + LRK53_RS07070 0.50 -1.1 1,592,472 + LRK53_RS07070 0.50 -1.2 1,592,472 + LRK53_RS07070 0.50 -1.1 1,592,472 + LRK53_RS07070 0.50 -1.5 1,592,472 + LRK53_RS07070 0.50 -0.1 1,592,472 + LRK53_RS07070 0.50 -0.7 1,592,472 + LRK53_RS07070 0.50 +0.9 1,592,472 + LRK53_RS07070 0.50 +0.5 1,592,472 + LRK53_RS07070 0.50 +0.1 1,592,472 + LRK53_RS07070 0.50 -0.5 1,592,472 + LRK53_RS07070 0.50 -1.4 1,592,472 + LRK53_RS07070 0.50 +0.7 1,592,472 + LRK53_RS07070 0.50 -1.4 1,592,473 - LRK53_RS07070 0.50 +0.6 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,473 - LRK53_RS07070 0.50 +1.5 1,592,473 - LRK53_RS07070 0.50 -3.0 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,473 - LRK53_RS07070 0.50 -1.5 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,473 - LRK53_RS07070 0.50 -1.0 1,592,473 - LRK53_RS07070 0.50 -2.1 1,592,473 - LRK53_RS07070 0.50 -0.8 1,592,473 - LRK53_RS07070 0.50 -0.5 1,592,473 - LRK53_RS07070 0.50 -0.7 1,592,473 - LRK53_RS07070 0.50 -0.7 1,592,473 - LRK53_RS07070 0.50 -0.8 1,592,473 - LRK53_RS07070 0.50 +0.0 1,592,473 - LRK53_RS07070 0.50 -0.9 1,592,473 - LRK53_RS07070 0.50 +0.5 1,592,473 - LRK53_RS07070 0.50 -0.9 1,592,473 - LRK53_RS07070 0.50 -1.4 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,473 - LRK53_RS07070 0.50 -1.1 1,592,473 - LRK53_RS07070 0.50 +0.1 1,592,473 - LRK53_RS07070 0.50 -0.6 1,592,473 - LRK53_RS07070 0.50 +0.3 1,592,473 - LRK53_RS07070 0.50 -1.2 1,592,473 - LRK53_RS07070 0.50 +0.1 1,592,473 - LRK53_RS07070 0.50 -0.8 1,592,473 - LRK53_RS07070 0.50 -0.1 1,592,505 + LRK53_RS07070 0.57 -1.7 1,592,505 + LRK53_RS07070 0.57 -1.4 1,592,506 - LRK53_RS07070 0.57 -0.6 1,592,506 - LRK53_RS07070 0.57 -0.7 1,592,740 + -0.9 1,592,741 - -0.1 1,592,811 + -0.5 1,592,811 + -0.6 1,592,811 + +0.9 1,592,811 + -0.4 1,592,811 + -1.1 1,592,812 - +0.9 1,592,812 - -0.4
Or see this region's nucleotide sequence