Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16470

Experiment: R2A_PIPES with Cobalt chloride 1024 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cobalt chloride 1024 uM
3,626,176	+				-2.4
3,626,177	-				-1.0
3,626,177	-				+1.0
3,626,311	+				-1.3
3,626,311	+				-0.5
3,626,311	+				-1.0
3,626,311	+				+0.5
3,626,311	+				+0.5
3,626,389	-		LRK53_RS16465	0.19	-1.3
3,626,431	+		LRK53_RS16465	0.27	-1.4
3,626,432	-		LRK53_RS16465	0.27	+0.0
3,626,701	+		LRK53_RS16465	0.76	-1.0
3,626,702	-		LRK53_RS16465	0.76	+0.5
3,626,702	-		LRK53_RS16465	0.76	-0.5
3,626,702	-		LRK53_RS16465	0.76	-1.0
3,626,702	-		LRK53_RS16465	0.76	+1.0
3,626,907	-				+0.5
3,626,907	-				-1.5
3,626,907	-				+1.0
3,626,907	-				-1.1
3,626,907	-				-1.0
3,626,907	-				+0.5
3,626,920	+				-1.8
3,626,920	+				-1.6
3,626,920	+				-1.5
3,626,921	-				+2.0
3,626,921	-				-0.7
3,626,921	-				+1.0
3,626,921	-				-0.9
3,626,921	-				-2.0
3,626,962	+				-1.1
3,626,962	+				-0.5
3,626,962	+				+0.2
3,626,962	+				-0.8
3,626,962	+				-1.0
3,626,963	-				-1.9
3,626,963	-				-1.9
3,626,963	-				+0.0
3,626,963	-				-0.8
3,626,963	-				-1.3
3,626,963	-				+1.5
3,626,963	-				-0.1
3,626,965	+				+1.0
3,626,966	-				-1.8
3,627,027	+				-2.0
3,627,027	+				-1.3
3,627,027	+				-1.0
3,627,027	+				-1.0
3,627,027	+				-0.5
3,627,028	-				+0.5
3,627,028	-				-1.5
3,627,028	-				-1.8
3,627,028	-				-0.5
3,627,028	-				-1.6
3,627,030	+				-1.0
3,627,030	+				+1.0
3,627,031	-				+0.0
3,627,031	-				+1.5
3,627,031	-				-0.3
3,627,031	-				+1.0
3,627,031	-				-1.9
3,627,031	-				+0.6
3,627,031	-				-0.9
3,627,031	-				-0.5
3,627,031	-				+1.0
3,627,031	-				-0.5
3,627,031	-				-0.5
3,627,031	-				-1.0
3,627,039	+				-1.1
3,627,040	-				-1.3
3,627,040	-				-2.3
3,627,134	+		LRK53_RS16470	0.12	-1.0
3,627,135	-		LRK53_RS16470	0.12	+0.2
3,627,284	-		LRK53_RS16470	0.25	-0.8
3,627,284	-		LRK53_RS16470	0.25	-2.1
3,627,287	+		LRK53_RS16470	0.25	-0.9
3,627,287	+		LRK53_RS16470	0.25	-0.5
3,627,287	+		LRK53_RS16470	0.25	-1.5
3,627,287	+		LRK53_RS16470	0.25	-0.2
3,627,287	+		LRK53_RS16470	0.25	+1.0
3,627,287	+		LRK53_RS16470	0.25	-1.4
3,627,287	+		LRK53_RS16470	0.25	-1.8
3,627,288	-		LRK53_RS16470	0.25	-0.5
3,627,288	-		LRK53_RS16470	0.25	+0.2
3,627,288	-		LRK53_RS16470	0.25	-1.0
3,627,288	-		LRK53_RS16470	0.25	+0.0
3,627,288	-		LRK53_RS16470	0.25	+0.5
3,627,288	-		LRK53_RS16470	0.25	-2.0
3,627,288	-		LRK53_RS16470	0.25	+0.4
3,627,381	+		LRK53_RS16470	0.33	-2.8
3,627,381	+		LRK53_RS16470	0.33	-0.5
3,627,381	+		LRK53_RS16470	0.33	+1.0
3,627,381	+		LRK53_RS16470	0.33	-0.2
3,627,382	-		LRK53_RS16470	0.33	-1.2
3,627,382	-		LRK53_RS16470	0.33	-0.8
3,627,382	-		LRK53_RS16470	0.33	+0.0
3,627,382	-		LRK53_RS16470	0.33	-1.1
3,627,382	-		LRK53_RS16470	0.33	-0.8
3,627,384	+		LRK53_RS16470	0.34	+1.0
3,627,384	+		LRK53_RS16470	0.34	-1.1
3,627,384	+		LRK53_RS16470	0.34	+1.0
3,627,384	+		LRK53_RS16470	0.34	+1.6
3,627,384	+		LRK53_RS16470	0.34	-2.0
3,627,384	+		LRK53_RS16470	0.34	-0.5
3,627,384	+		LRK53_RS16470	0.34	-1.0
3,627,385	-		LRK53_RS16470	0.34	-0.2
3,627,385	-		LRK53_RS16470	0.34	-1.3
3,627,385	-		LRK53_RS16470	0.34	+1.0
3,627,385	-		LRK53_RS16470	0.34	-0.4
3,627,385	-		LRK53_RS16470	0.34	+1.6
3,627,385	-		LRK53_RS16470	0.34	-1.0
3,627,385	-		LRK53_RS16470	0.34	-0.3
3,627,385	-		LRK53_RS16470	0.34	-0.5
3,627,385	-		LRK53_RS16470	0.34	-0.6
3,627,408	+		LRK53_RS16470	0.36	-0.5
3,627,408	+		LRK53_RS16470	0.36	-0.5
3,627,409	-		LRK53_RS16470	0.36	+1.0
3,627,420	+		LRK53_RS16470	0.37	-1.1
3,627,420	+		LRK53_RS16470	0.37	+2.0
3,627,421	-		LRK53_RS16470	0.37	+1.0
3,627,686	-		LRK53_RS16470	0.60	+0.0
3,627,818	+		LRK53_RS16470	0.71	-0.3
3,627,818	+		LRK53_RS16470	0.71	+1.0
3,627,818	+		LRK53_RS16470	0.71	+0.0
3,627,818	+		LRK53_RS16470	0.71	-0.2
3,627,818	+		LRK53_RS16470	0.71	+0.2
3,627,818	+		LRK53_RS16470	0.71	-1.0
3,627,818	+		LRK53_RS16470	0.71	-0.3
3,627,818	+		LRK53_RS16470	0.71	-1.3
3,627,818	+		LRK53_RS16470	0.71	-0.5
3,627,818	+		LRK53_RS16470	0.71	-1.3
3,627,818	+		LRK53_RS16470	0.71	+0.0
3,627,818	+		LRK53_RS16470	0.71	-0.8
3,627,818	+		LRK53_RS16470	0.71	-2.5
3,627,818	+		LRK53_RS16470	0.71	+1.0
3,627,819	-		LRK53_RS16470	0.71	-0.4
3,627,819	-		LRK53_RS16470	0.71	+0.0
3,627,819	-		LRK53_RS16470	0.71	-0.4
3,627,819	-		LRK53_RS16470	0.71	+0.3
3,627,819	-		LRK53_RS16470	0.71	-0.8
3,627,819	-		LRK53_RS16470	0.71	-0.5
3,627,819	-		LRK53_RS16470	0.71	+0.0
3,627,819	-		LRK53_RS16470	0.71	-1.0
3,627,819	-		LRK53_RS16470	0.71	+0.0
3,627,819	-		LRK53_RS16470	0.71	-0.5
3,627,819	-		LRK53_RS16470	0.71	-0.7
3,627,819	-		LRK53_RS16470	0.71	-0.7
3,627,819	-		LRK53_RS16470	0.71	-0.8
3,627,819	-		LRK53_RS16470	0.71	-0.3
3,627,819	-		LRK53_RS16470	0.71	-1.0
3,627,819	-		LRK53_RS16470	0.71	-1.7
3,627,819	-		LRK53_RS16470	0.71	+0.5
3,627,819	-		LRK53_RS16470	0.71	+0.0
3,627,819	-		LRK53_RS16470	0.71	-0.1
3,627,819	-		LRK53_RS16470	0.71	-0.2
3,627,819	-		LRK53_RS16470	0.71	+0.5
3,627,819	-		LRK53_RS16470	0.71	-0.5
3,627,819	-		LRK53_RS16470	0.71	+1.8
3,627,819	-		LRK53_RS16470	0.71	-1.8
3,627,822	+		LRK53_RS16470	0.71	+0.0
3,627,822	+		LRK53_RS16470	0.71	+0.5
3,627,822	+		LRK53_RS16470	0.71	+0.0
3,627,822	+		LRK53_RS16470	0.71	-0.5
3,627,822	+		LRK53_RS16470	0.71	-0.7
3,627,822	+		LRK53_RS16470	0.71	+1.0
3,627,822	+		LRK53_RS16470	0.71	+2.0
3,627,822	+		LRK53_RS16470	0.71	+0.0
3,627,822	+		LRK53_RS16470	0.71	+0.0
3,627,822	+		LRK53_RS16470	0.71	-0.2
3,627,823	-		LRK53_RS16470	0.71	-1.0
3,627,823	-		LRK53_RS16470	0.71	-0.7
3,627,823	-		LRK53_RS16470	0.71	-1.3
3,627,823	-		LRK53_RS16470	0.71	+0.8
3,627,823	-		LRK53_RS16470	0.71	-1.2
3,627,823	-		LRK53_RS16470	0.71	-1.3
3,627,823	-		LRK53_RS16470	0.71	+1.0
3,627,823	-		LRK53_RS16470	0.71	-0.3
3,627,823	-		LRK53_RS16470	0.71	-1.1
3,627,879	+		LRK53_RS16470	0.76	-1.1
3,627,880	-		LRK53_RS16470	0.76	-1.5
3,627,880	-		LRK53_RS16470	0.76	-2.3
3,627,880	-		LRK53_RS16470	0.76	-1.3
3,627,880	-		LRK53_RS16470	0.76	+2.0
3,627,951	+		LRK53_RS16470	0.82	-0.7
3,627,951	+		LRK53_RS16470	0.82	+0.0
3,627,951	+		LRK53_RS16470	0.82	-1.0
3,627,951	+		LRK53_RS16470	0.82	-1.1
3,627,951	+		LRK53_RS16470	0.82	+0.0
3,627,951	+		LRK53_RS16470	0.82	-0.3
3,627,952	-		LRK53_RS16470	0.82	-1.1
3,627,952	-		LRK53_RS16470	0.82	+0.0
3,627,952	-		LRK53_RS16470	0.82	-0.4
3,627,952	-		LRK53_RS16470	0.82	-1.4
3,627,952	-		LRK53_RS16470	0.82	-0.8
3,627,952	-		LRK53_RS16470	0.82	-1.0
3,627,952	-		LRK53_RS16470	0.82	-1.1
3,627,952	-		LRK53_RS16470	0.82	-1.0
3,627,952	-		LRK53_RS16470	0.82	-1.5
3,627,952	-		LRK53_RS16470	0.82	+1.6
3,627,952	-		LRK53_RS16470	0.82	-1.3
3,627,952	-		LRK53_RS16470	0.82	+0.0
3,627,952	-		LRK53_RS16470	0.82	+0.0
3,627,952	-		LRK53_RS16470	0.82	-1.8
3,627,952	-		LRK53_RS16470	0.82	+1.0
3,627,952	-		LRK53_RS16470	0.82	-0.4
3,627,952	-		LRK53_RS16470	0.82	+0.5
3,627,957	+		LRK53_RS16470	0.83	-1.1
3,627,958	-		LRK53_RS16470	0.83	-1.1
3,627,958	-		LRK53_RS16470	0.83	+0.9
3,627,958	-		LRK53_RS16470	0.83	-1.0
3,627,958	-		LRK53_RS16470	0.83	-0.3
3,627,958	-		LRK53_RS16470	0.83	+0.0
3,627,965	+		LRK53_RS16470	0.84	+0.0
3,627,965	+		LRK53_RS16470	0.84	+1.0
3,627,966	-		LRK53_RS16470	0.84	-0.3
3,627,966	-		LRK53_RS16470	0.84	+0.0
3,628,104	+				-2.1
3,628,104	+				+2.6
3,628,104	+				-0.9
3,628,104	+				-0.3
3,628,104	+				+1.0
3,628,105	-				-1.5
3,628,105	-				+0.0
3,628,105	-				-2.0
3,628,105	-				+0.0
3,628,105	-				+0.0
3,628,105	-				-0.7
3,628,105	-				+1.0
3,628,105	-				-0.5
3,628,105	-				-1.3
3,628,105	-				+0.0
3,628,134	+				-1.7
3,628,134	+				+0.0
3,628,134	+				+1.6
3,628,134	+				-3.1
3,628,134	+				+0.0
3,628,134	+				+1.0
3,628,135	-				+0.3
3,628,135	-				-0.8
3,628,135	-				-0.9
3,628,190	+				-0.4
3,628,190	+				-0.5
3,628,191	-				-0.5
3,628,215	+				-0.9
3,628,231	+				+0.3
3,628,232	-				+0.1
3,628,292	+				-1.8
3,628,292	+				+1.0
3,628,292	+				+0.0
3,628,293	-				-1.3
3,628,293	-				+0.1
3,628,303	+				-1.2
3,628,303	+				-1.4
3,628,303	+				+0.0
3,628,303	+				+0.0
3,628,303	+				-0.1
3,628,303	+				-1.5
3,628,303	+				-0.5
3,628,303	+				-1.0
3,628,303	+				-0.5
3,628,303	+				-1.0
3,628,303	+				-0.8
3,628,303	+				-2.0
3,628,303	+				-1.5
3,628,304	-				+0.5
3,628,304	-				+2.0
3,628,304	-				-1.0
3,628,304	-				-0.5
3,628,304	-				-0.5
3,628,304	-				-1.0
3,628,304	-				+0.6
3,628,304	-				+1.0
3,628,304	-				+0.8
3,628,304	-				+1.0
3,628,304	-				+0.0
3,628,305	+				-0.5
3,628,305	+				+0.0
3,628,306	-				+0.5
3,628,615	+		LRK53_RS16475	0.16	+1.0
3,628,616	-		LRK53_RS16475	0.16	-0.4
3,629,005	+		LRK53_RS16475	0.37	-0.5
3,629,006	-		LRK53_RS16475	0.37	+0.7
3,629,014	+		LRK53_RS16475	0.37	-2.1
3,629,014	+		LRK53_RS16475	0.37	-0.5
3,629,014	+		LRK53_RS16475	0.37	-0.8
3,629,014	+		LRK53_RS16475	0.37	+1.0
3,629,014	+		LRK53_RS16475	0.37	+0.0
3,629,014	+		LRK53_RS16475	0.37	-0.3
3,629,014	+		LRK53_RS16475	0.37	+1.0
3,629,014	+		LRK53_RS16475	0.37	-1.0
3,629,014	+		LRK53_RS16475	0.37	+1.0
3,629,014	+		LRK53_RS16475	0.37	-0.3
3,629,015	-		LRK53_RS16475	0.37	-1.3
3,629,015	-		LRK53_RS16475	0.37	-1.3
3,629,015	-		LRK53_RS16475	0.37	-1.3
3,629,015	-		LRK53_RS16475	0.37	-1.3
3,629,015	-		LRK53_RS16475	0.37	-1.8
3,629,015	-		LRK53_RS16475	0.37	-0.5
3,629,015	-		LRK53_RS16475	0.37	-0.7
3,629,015	-		LRK53_RS16475	0.37	+1.0
3,629,015	-		LRK53_RS16475	0.37	-0.2
3,629,015	-		LRK53_RS16475	0.37	+1.0