Strain Fitness in Fusobacterium nucleatum SB010 around HUW76_08570

Experiment: G1M1_D4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	G1M1_D4
1,790,711	+		HUW76_08555	0.33	-2.8
1,790,711	-		HUW76_08555	0.33	-3.0
1,790,711	-		HUW76_08555	0.33	-1.4
1,790,711	-		HUW76_08555	0.33	+3.0
1,790,711	-		HUW76_08555	0.33	-0.2
1,790,711	-		HUW76_08555	0.33	-0.6
1,790,711	-		HUW76_08555	0.33	-1.0
1,790,711	-		HUW76_08555	0.33	-1.2
1,790,711	-		HUW76_08555	0.33	-0.7
1,790,719	-		HUW76_08555	0.34	-2.4
1,790,721	-		HUW76_08555	0.34	-1.2
1,790,721	-		HUW76_08555	0.34	-2.6
1,790,721	-		HUW76_08555	0.34	-3.2
1,790,724	-		HUW76_08555	0.35	-0.5
1,790,724	-		HUW76_08555	0.35	-3.7
1,790,724	-		HUW76_08555	0.35	-1.0
1,790,799	-		HUW76_08555	0.46	-3.2
1,790,799	-		HUW76_08555	0.46	-1.9
1,790,824	+		HUW76_08555	0.50	-2.1
1,790,824	+		HUW76_08555	0.50	-2.4
1,790,824	+		HUW76_08555	0.50	-2.4
1,790,829	-		HUW76_08555	0.51	-2.3
1,790,829	-		HUW76_08555	0.51	-1.8
1,790,895	+		HUW76_08555	0.61	-2.1
1,790,895	+		HUW76_08555	0.61	+1.0
1,790,906	-		HUW76_08555	0.63	-2.9
1,791,046	+		HUW76_08555	0.84	-0.9
1,791,047	+		HUW76_08555	0.84	-1.2
1,791,054	-		HUW76_08555	0.85	-3.7
1,791,088	-				-2.6
1,791,088	-				-0.7
1,791,137	+				-0.1
1,791,150	+		HUW76_08560	0.12	+0.7
1,791,158	-		HUW76_08560	0.16	-0.4
1,791,158	-		HUW76_08560	0.16	+1.1
1,791,158	-		HUW76_08560	0.16	-1.2
1,791,251	-		HUW76_08560	0.57	+1.0
1,791,251	-		HUW76_08560	0.57	+0.1
1,791,304	-		HUW76_08560	0.80	-0.4
1,791,359	-				-2.1
1,791,359	-				-1.4
1,791,403	-		HUW76_08565	0.19	-0.2
1,791,425	-		HUW76_08565	0.26	+0.9
1,791,431	-		HUW76_08565	0.27	-1.6
1,791,433	+		HUW76_08565	0.28	+0.1
1,791,433	+		HUW76_08565	0.28	+0.6
1,791,433	+		HUW76_08565	0.28	+0.5
1,791,441	-		HUW76_08565	0.30	+0.4
1,791,441	-		HUW76_08565	0.30	-0.2
1,791,451	-		HUW76_08565	0.33	-1.3
1,791,451	-		HUW76_08565	0.33	+1.2
1,791,451	-		HUW76_08565	0.33	+0.9
1,791,451	-		HUW76_08565	0.33	+0.6
1,791,484	+		HUW76_08565	0.42	-0.7
1,791,506	-		HUW76_08565	0.48	-0.7
1,791,627	+		HUW76_08565	0.82	+1.2
1,791,635	-		HUW76_08565	0.84	-0.5
1,791,635	-		HUW76_08565	0.84	-0.3
1,791,752	+				-0.5
1,791,752	+				+0.2
1,791,752	+				+1.8
1,791,812	+		HUW76_08570	0.18	-1.3
1,791,815	-		HUW76_08570	0.18	+1.1
1,791,821	-		HUW76_08570	0.19	-0.7
1,791,821	-		HUW76_08570	0.19	+0.2
1,791,821	-		HUW76_08570	0.19	-0.7
1,791,830	+		HUW76_08570	0.21	+0.2
1,791,830	+		HUW76_08570	0.21	+0.6
1,791,835	+		HUW76_08570	0.22	-2.3
1,791,838	-		HUW76_08570	0.22	+0.9
1,791,848	-		HUW76_08570	0.24	+1.2
1,791,854	-		HUW76_08570	0.25	-0.5
1,791,854	-		HUW76_08570	0.25	-0.9
1,791,867	+		HUW76_08570	0.27	-0.8
1,791,867	+		HUW76_08570	0.27	-0.4
1,791,867	+		HUW76_08570	0.27	+1.4
1,791,867	+		HUW76_08570	0.27	-0.1
1,791,867	+		HUW76_08570	0.27	+0.4
1,791,868	+		HUW76_08570	0.27	-1.6
1,791,870	-		HUW76_08570	0.27	-1.1
1,791,870	-		HUW76_08570	0.27	+3.4
1,791,875	-		HUW76_08570	0.28	+0.8
1,791,875	-		HUW76_08570	0.28	+0.7
1,791,875	-		HUW76_08570	0.28	+0.6
1,791,875	-		HUW76_08570	0.28	-0.6
1,791,875	-		HUW76_08570	0.28	+1.2
1,791,875	-		HUW76_08570	0.28	+0.6
1,791,876	-		HUW76_08570	0.28	+0.2
1,791,884	-		HUW76_08570	0.29	-0.8
1,791,910	+		HUW76_08570	0.33	-1.0
1,791,918	-		HUW76_08570	0.35	+0.1
1,791,930	+		HUW76_08570	0.37	-1.0
1,791,985	+		HUW76_08570	0.45	+0.7
1,792,033	+		HUW76_08570	0.53	+1.7
1,792,033	+		HUW76_08570	0.53	-1.3
1,792,041	+		HUW76_08570	0.54	-1.6
1,792,042	-		HUW76_08570	0.54	-0.9
1,792,042	-		HUW76_08570	0.54	+0.4
1,792,044	+		HUW76_08570	0.55	-0.3
1,792,044	+		HUW76_08570	0.55	-0.5
1,792,044	+		HUW76_08570	0.55	-1.0
1,792,170	+		HUW76_08570	0.75	+0.3
1,792,170	+		HUW76_08570	0.75	-2.4
1,792,222	+		HUW76_08570	0.83	-0.2
1,792,223	+		HUW76_08570	0.83	+0.8
1,792,223	+		HUW76_08570	0.83	-1.0
1,792,231	-		HUW76_08570	0.84	-0.3
1,792,231	-		HUW76_08570	0.84	+2.1
1,792,231	-		HUW76_08570	0.84	-0.1
1,792,231	-		HUW76_08570	0.84	+0.0
1,792,240	+		HUW76_08570	0.86	+0.1
1,792,240	+		HUW76_08570	0.86	-1.7
1,792,248	-		HUW76_08570	0.87	+0.5
1,792,257	-		HUW76_08570	0.88	+1.3
1,792,257	-		HUW76_08570	0.88	+1.0
1,792,260	+		HUW76_08570	0.89	-1.8
1,792,260	+		HUW76_08570	0.89	-1.8
1,792,260	+		HUW76_08570	0.89	+0.7
1,792,267	-				-0.7
1,792,267	-				+2.1
1,792,268	-				-0.1
1,792,274	+				-0.5
1,792,274	+				-1.4
1,792,280	+				-0.9
1,792,296	-				+0.4
1,792,296	-				+0.7
1,792,540	-				-0.2
1,792,547	-				-0.1
1,792,708	-		HUW76_08575	0.16	+4.9
1,792,708	-		HUW76_08575	0.16	+4.3
1,792,776	+		HUW76_08575	0.23	+2.1
1,792,776	+		HUW76_08575	0.23	+2.8
1,792,784	+		HUW76_08575	0.24	+2.7
1,792,801	+		HUW76_08575	0.26	+3.0
1,792,809	-		HUW76_08575	0.27	+4.8
1,792,809	-		HUW76_08575	0.27	+4.3
1,792,814	-		HUW76_08575	0.27	+3.5
1,792,850	+		HUW76_08575	0.31	+2.2
1,792,850	+		HUW76_08575	0.31	+3.3
1,792,850	+		HUW76_08575	0.31	+3.0
1,792,858	-		HUW76_08575	0.32	+4.4
1,792,858	-		HUW76_08575	0.32	+4.2
1,792,868	+		HUW76_08575	0.33	+0.1
1,792,868	+		HUW76_08575	0.33	+3.6
1,793,027	-		HUW76_08575	0.49	+4.1
1,793,082	+		HUW76_08575	0.54	+2.9
1,793,092	+		HUW76_08575	0.55	+2.9
1,793,092	+		HUW76_08575	0.55	+3.1
1,793,100	-		HUW76_08575	0.56	+3.1
1,793,100	-		HUW76_08575	0.56	+4.7
1,793,100	-		HUW76_08575	0.56	+4.7
1,793,100	-		HUW76_08575	0.56	+4.0
1,793,100	-		HUW76_08575	0.56	+4.4
1,793,100	-		HUW76_08575	0.56	+4.2
1,793,115	+		HUW76_08575	0.58	+2.4
1,793,115	+		HUW76_08575	0.58	+2.3
1,793,121	-		HUW76_08575	0.58	+4.4
1,793,123	-		HUW76_08575	0.58	+4.2
1,793,123	-		HUW76_08575	0.58	+4.2
1,793,167	+		HUW76_08575	0.63	+4.0
1,793,175	-		HUW76_08575	0.64	+5.5
1,793,175	-		HUW76_08575	0.64	+4.5
1,793,175	-		HUW76_08575	0.64	+4.2
1,793,175	-		HUW76_08575	0.64	+4.5
1,793,185	-		HUW76_08575	0.65	+4.1
1,793,185	-		HUW76_08575	0.65	+4.4
1,793,195	+		HUW76_08575	0.66	+4.3
1,793,195	+		HUW76_08575	0.66	+3.7
1,793,195	+		HUW76_08575	0.66	+2.6
1,793,203	-		HUW76_08575	0.67	+4.7
1,793,203	-		HUW76_08575	0.67	+5.0
1,793,223	-		HUW76_08575	0.69	+4.4
1,793,236	-		HUW76_08575	0.70	+4.4
1,793,247	+		HUW76_08575	0.71	+2.3
1,793,247	+		HUW76_08575	0.71	+4.0
1,793,255	-		HUW76_08575	0.72	+4.2
1,793,255	-		HUW76_08575	0.72	+4.4
1,793,296	-		HUW76_08575	0.76	+4.7
1,793,296	-		HUW76_08575	0.76	+4.9