Experiment: G1M1_D4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HUW76_04140 and HUW76_04145 overlap by 52 nucleotides HUW76_04145 and HUW76_04150 are separated by 122 nucleotides HUW76_04150 and HUW76_04155 are separated by 39 nucleotides HUW76_04155 and HUW76_04160 are separated by 291 nucleotides HUW76_04160 and HUW76_04165 are separated by 200 nucleotides
HUW76_04140: HUW76_04140 - DUF1963 domain-containing protein, at 832,921 to 833,070
_04140
HUW76_04145: HUW76_04145 - hypothetical protein, at 833,019 to 833,180
_04145
HUW76_04150: HUW76_04150 - hypothetical protein, at 833,303 to 833,809
_04150
HUW76_04155: HUW76_04155 - cysteine synthase A, at 833,849 to 834,769
_04155
HUW76_04160: HUW76_04160 - hypothetical protein, at 835,061 to 835,516
_04160
HUW76_04165: HUW76_04165 - DUF445 family protein, at 835,717 to 836,319
_04165
Position (kb) 833
834
835 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 832.849 kb on + strand at 832.852 kb on - strand at 832.883 kb on - strand at 832.920 kb on + strand at 832.928 kb on - strand at 833.009 kb on - strand, within HUW76_04140 at 833.022 kb on + strand at 833.022 kb on + strand at 833.135 kb on + strand, within HUW76_04145 at 833.135 kb on + strand, within HUW76_04145 at 833.143 kb on - strand, within HUW76_04145 at 833.143 kb on - strand, within HUW76_04145 at 833.227 kb on + strand at 833.227 kb on + strand at 833.234 kb on + strand at 833.262 kb on - strand at 833.262 kb on - strand at 833.262 kb on - strand at 833.262 kb on - strand at 833.262 kb on - strand at 833.272 kb on + strand at 833.354 kb on + strand, within HUW76_04150 at 833.390 kb on + strand, within HUW76_04150 at 833.417 kb on - strand, within HUW76_04150 at 833.504 kb on - strand, within HUW76_04150 at 833.504 kb on - strand, within HUW76_04150 at 833.567 kb on + strand, within HUW76_04150 at 833.605 kb on - strand, within HUW76_04150 at 833.626 kb on - strand, within HUW76_04150 at 833.636 kb on - strand, within HUW76_04150 at 833.647 kb on + strand, within HUW76_04150 at 833.647 kb on + strand, within HUW76_04150 at 833.647 kb on + strand, within HUW76_04150 at 833.653 kb on + strand, within HUW76_04150 at 833.653 kb on + strand, within HUW76_04150 at 833.653 kb on + strand, within HUW76_04150 at 833.655 kb on - strand, within HUW76_04150 at 833.655 kb on - strand, within HUW76_04150 at 833.659 kb on + strand, within HUW76_04150 at 833.659 kb on + strand, within HUW76_04150 at 833.659 kb on + strand, within HUW76_04150 at 833.662 kb on - strand, within HUW76_04150 at 833.666 kb on - strand, within HUW76_04150 at 833.667 kb on + strand, within HUW76_04150 at 833.667 kb on + strand, within HUW76_04150 at 833.667 kb on + strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.667 kb on - strand, within HUW76_04150 at 833.675 kb on - strand, within HUW76_04150 at 833.675 kb on - strand, within HUW76_04150 at 833.718 kb on + strand, within HUW76_04150 at 833.718 kb on + strand, within HUW76_04150 at 833.769 kb on + strand at 833.769 kb on + strand at 834.852 kb on - strand at 834.854 kb on + strand at 834.962 kb on - strand at 834.972 kb on - strand at 835.037 kb on - strand at 835.118 kb on + strand, within HUW76_04160 at 835.278 kb on + strand, within HUW76_04160 at 835.510 kb on - strand at 835.590 kb on + strand at 835.590 kb on + strand at 835.690 kb on + strand at 835.690 kb on + strand at 835.725 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction G1M1_D4 remove 832,849 + +0.2 832,852 - -0.7 832,883 - +2.0 832,920 + +0.4 832,928 - +1.4 833,009 - HUW76_04140 0.59 +0.1 833,022 + -1.8 833,022 + -1.0 833,135 + HUW76_04145 0.72 +0.5 833,135 + HUW76_04145 0.72 -0.8 833,143 - HUW76_04145 0.77 +0.2 833,143 - HUW76_04145 0.77 +0.6 833,227 + +0.2 833,227 + -1.2 833,234 + -0.2 833,262 - +0.1 833,262 - -0.6 833,262 - +3.3 833,262 - -0.6 833,262 - +3.6 833,272 + +0.5 833,354 + HUW76_04150 0.10 -0.3 833,390 + HUW76_04150 0.17 -2.4 833,417 - HUW76_04150 0.22 -2.0 833,504 - HUW76_04150 0.40 -1.6 833,504 - HUW76_04150 0.40 -0.0 833,567 + HUW76_04150 0.52 -0.7 833,605 - HUW76_04150 0.60 -0.2 833,626 - HUW76_04150 0.64 +0.2 833,636 - HUW76_04150 0.66 -0.4 833,647 + HUW76_04150 0.68 +0.2 833,647 + HUW76_04150 0.68 -0.3 833,647 + HUW76_04150 0.68 +1.3 833,653 + HUW76_04150 0.69 +1.9 833,653 + HUW76_04150 0.69 +0.3 833,653 + HUW76_04150 0.69 +0.3 833,655 - HUW76_04150 0.69 -0.8 833,655 - HUW76_04150 0.69 +1.3 833,659 + HUW76_04150 0.70 +0.5 833,659 + HUW76_04150 0.70 +0.6 833,659 + HUW76_04150 0.70 +1.0 833,662 - HUW76_04150 0.71 -1.5 833,666 - HUW76_04150 0.72 -0.2 833,667 + HUW76_04150 0.72 +0.9 833,667 + HUW76_04150 0.72 +0.4 833,667 + HUW76_04150 0.72 -0.1 833,667 - HUW76_04150 0.72 -0.4 833,667 - HUW76_04150 0.72 +0.3 833,667 - HUW76_04150 0.72 -0.3 833,667 - HUW76_04150 0.72 +0.6 833,667 - HUW76_04150 0.72 +2.1 833,667 - HUW76_04150 0.72 -2.2 833,667 - HUW76_04150 0.72 -0.4 833,675 - HUW76_04150 0.73 +0.8 833,675 - HUW76_04150 0.73 +0.1 833,718 + HUW76_04150 0.82 +1.8 833,718 + HUW76_04150 0.82 -2.4 833,769 + -2.0 833,769 + +0.4 834,852 - -0.7 834,854 + +0.1 834,962 - -2.9 834,972 - -0.5 835,037 - -0.1 835,118 + HUW76_04160 0.12 +1.0 835,278 + HUW76_04160 0.48 -0.4 835,510 - -0.3 835,590 + +1.9 835,590 + +2.7 835,690 + +2.5 835,690 + +2.9 835,725 + +3.5
Or see this region's nucleotide sequence