Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08720

Experiment: R2A_PIPES with Cobalt chloride 512 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cobalt chloride 512 uM
1,958,845	+		LRK53_RS08715	0.41	-0.1
1,958,845	+		LRK53_RS08715	0.41	-2.1
1,958,845	+		LRK53_RS08715	0.41	-0.4
1,958,846	-		LRK53_RS08715	0.42	-0.7
1,958,846	-		LRK53_RS08715	0.42	-1.0
1,958,846	-		LRK53_RS08715	0.42	-1.1
1,958,906	+		LRK53_RS08715	0.45	-1.9
1,958,907	-		LRK53_RS08715	0.45	-1.4
1,958,907	-		LRK53_RS08715	0.45	-0.3
1,958,907	-		LRK53_RS08715	0.45	-0.9
1,958,907	-		LRK53_RS08715	0.45	-0.1
1,959,004	+		LRK53_RS08715	0.51	-1.7
1,959,005	-		LRK53_RS08715	0.51	-1.1
1,959,050	+		LRK53_RS08715	0.54	-0.1
1,959,050	+		LRK53_RS08715	0.54	+0.9
1,959,137	+		LRK53_RS08715	0.59	-1.6
1,959,137	+		LRK53_RS08715	0.59	+0.9
1,959,163	+		LRK53_RS08715	0.61	-0.3
1,959,163	+		LRK53_RS08715	0.61	+0.9
1,959,163	+		LRK53_RS08715	0.61	-0.1
1,959,164	-		LRK53_RS08715	0.61	-0.7
1,959,183	-		LRK53_RS08715	0.62	+0.9
1,959,183	-		LRK53_RS08715	0.62	-0.7
1,959,183	-		LRK53_RS08715	0.62	-0.3
1,959,299	-		LRK53_RS08715	0.69	-1.2
1,959,299	-		LRK53_RS08715	0.69	-1.9
1,959,515	+		LRK53_RS08715	0.82	-1.0
1,959,535	+		LRK53_RS08715	0.83	+0.3
1,959,535	+		LRK53_RS08715	0.83	-1.2
1,959,535	+		LRK53_RS08715	0.83	+0.3
1,959,535	+		LRK53_RS08715	0.83	-2.2
1,959,536	-		LRK53_RS08715	0.83	-0.1
1,959,536	-		LRK53_RS08715	0.83	-1.4
1,959,536	-		LRK53_RS08715	0.83	-1.4
1,959,536	-		LRK53_RS08715	0.83	+0.9
1,959,536	-		LRK53_RS08715	0.83	-0.8
1,959,692	+				-0.7
1,959,864	+				-0.7
1,959,864	+				-2.7
1,959,898	+				-0.7
1,959,898	+				-1.4
1,959,898	+				-1.9
1,959,898	+				-1.4
1,959,898	+				-2.3
1,959,898	+				+0.9
1,959,898	+				-1.1
1,959,899	-				-0.2
1,959,902	+				-2.9
1,959,902	+				+0.9
1,959,902	+				-0.7
1,959,902	+				+1.6
1,959,902	+				-1.4
1,959,902	+				+0.5
1,959,902	+				+1.5
1,959,902	+				+0.1
1,959,902	+				-0.7
1,959,903	-				-2.1
1,959,903	-				-1.9
1,959,903	-				-0.9
1,959,903	-				+0.2
1,959,903	-				-1.4
1,959,975	+				-1.7
1,959,975	+				+0.2
1,959,976	-				-0.7
1,959,976	-				-0.6
1,959,976	-				+0.9
1,959,976	-				-1.1
1,959,989	-				-0.5
1,959,989	-				-1.8
1,960,009	-				-0.1
1,960,112	+		LRK53_RS08720	0.14	-0.1
1,960,112	+		LRK53_RS08720	0.14	-0.2
1,960,112	+		LRK53_RS08720	0.14	+1.5
1,960,113	-		LRK53_RS08720	0.14	-0.9
1,960,113	-		LRK53_RS08720	0.14	-0.1
1,960,146	+		LRK53_RS08720	0.16	-0.9
1,960,146	+		LRK53_RS08720	0.16	+1.5
1,960,146	+		LRK53_RS08720	0.16	+1.3
1,960,146	+		LRK53_RS08720	0.16	-0.4
1,960,147	-		LRK53_RS08720	0.16	+0.9
1,960,147	-		LRK53_RS08720	0.16	-0.1
1,960,147	-		LRK53_RS08720	0.16	-0.1
1,960,147	-		LRK53_RS08720	0.16	-1.3
1,960,153	-		LRK53_RS08720	0.16	-1.9
1,960,153	-		LRK53_RS08720	0.16	-0.5
1,960,153	-		LRK53_RS08720	0.16	-0.4
1,960,153	-		LRK53_RS08720	0.16	-0.1
1,960,153	-		LRK53_RS08720	0.16	-0.2
1,960,740	+		LRK53_RS08720	0.44	-0.2
1,960,974	+		LRK53_RS08720	0.55	-0.7
1,961,187	+		LRK53_RS08720	0.65	-0.7
1,961,187	+		LRK53_RS08720	0.65	-0.4
1,961,187	+		LRK53_RS08720	0.65	+0.6
1,961,187	+		LRK53_RS08720	0.65	-1.8
1,961,188	-		LRK53_RS08720	0.65	+0.9
1,961,188	-		LRK53_RS08720	0.65	+0.3
1,961,188	-		LRK53_RS08720	0.65	+0.3
1,961,188	-		LRK53_RS08720	0.65	-0.3
1,961,241	+		LRK53_RS08720	0.68	-0.1
1,961,241	+		LRK53_RS08720	0.68	-0.7
1,961,242	-		LRK53_RS08720	0.68	-0.5
1,961,242	-		LRK53_RS08720	0.68	+1.9
1,961,265	+		LRK53_RS08720	0.69	-0.3
1,961,266	-		LRK53_RS08720	0.69	-1.1
1,961,299	-		LRK53_RS08720	0.71	-2.4
1,961,299	-		LRK53_RS08720	0.71	-1.7
1,961,375	+		LRK53_RS08720	0.74	-0.5
1,961,376	-		LRK53_RS08720	0.74	-2.3
1,961,376	-		LRK53_RS08720	0.74	-1.1
1,961,376	-		LRK53_RS08720	0.74	-1.4
1,961,403	+		LRK53_RS08720	0.76	-1.9
1,961,404	-		LRK53_RS08720	0.76	-1.7
1,961,579	+		LRK53_RS08720	0.84	+0.3
1,961,579	+		LRK53_RS08720	0.84	-0.1
1,961,579	+		LRK53_RS08720	0.84	+2.5
1,961,579	+		LRK53_RS08720	0.84	+0.2
1,961,580	-		LRK53_RS08720	0.84	-2.1
1,961,580	-		LRK53_RS08720	0.84	-0.6
1,961,580	-		LRK53_RS08720	0.84	-1.9
1,961,580	-		LRK53_RS08720	0.84	+1.9
1,961,580	-		LRK53_RS08720	0.84	-0.1
1,961,840	-				-0.1
1,961,848	-				-0.3
1,961,896	+				-1.1
1,961,896	+				-1.1
1,961,967	+				-0.1
1,961,967	+				-0.6
1,961,967	+				-0.1
1,961,967	+				-2.3
1,961,967	+				-0.4
1,961,968	-				-0.4
1,962,033	+				+0.9
1,962,033	+				-2.2
1,962,033	+				-0.3
1,962,033	+				-0.9
1,962,034	-				-1.4
1,962,034	-				+2.2
1,962,034	-				-0.8
1,962,034	-				-0.2
1,962,034	-				-0.9
1,962,034	-				-0.1
1,962,045	+				+1.9
1,962,045	+				-1.2
1,962,046	-				+0.9
1,962,046	-				+0.5
1,962,046	-				-0.6
1,962,046	-				-0.3
1,962,046	-				-0.7
1,962,171	+				-0.5
1,962,171	+				-1.1
1,962,172	-				-0.7
1,962,172	-				-0.1
1,962,193	-		LRK53_RS08725	0.10	-2.4
1,962,203	+		LRK53_RS08725	0.11	+0.0
1,962,203	+		LRK53_RS08725	0.11	+1.9
1,962,203	+		LRK53_RS08725	0.11	-0.1
1,962,203	+		LRK53_RS08725	0.11	-1.0
1,962,203	+		LRK53_RS08725	0.11	-0.1
1,962,203	+		LRK53_RS08725	0.11	-2.4
1,962,204	-		LRK53_RS08725	0.11	-0.1
1,962,204	-		LRK53_RS08725	0.11	-0.1
1,962,240	+		LRK53_RS08725	0.13	+0.7
1,962,240	+		LRK53_RS08725	0.13	-0.8
1,962,240	+		LRK53_RS08725	0.13	-0.9
1,962,240	+		LRK53_RS08725	0.13	-0.1
1,962,241	-		LRK53_RS08725	0.13	-1.3
1,962,264	+		LRK53_RS08725	0.14	-0.1
1,962,264	+		LRK53_RS08725	0.14	-1.1
1,962,265	-		LRK53_RS08725	0.14	+0.0
1,962,276	+		LRK53_RS08725	0.14	-1.8
1,962,277	-		LRK53_RS08725	0.14	-1.1
1,962,277	-		LRK53_RS08725	0.14	-1.9
1,962,277	-		LRK53_RS08725	0.14	+0.3
1,962,277	-		LRK53_RS08725	0.14	-2.8
1,962,277	-		LRK53_RS08725	0.14	+0.9
1,962,277	-		LRK53_RS08725	0.14	+0.3
1,962,340	-		LRK53_RS08725	0.17	+1.9
1,962,354	+		LRK53_RS08725	0.18	-1.4
1,962,382	-		LRK53_RS08725	0.19	-1.6
1,962,382	-		LRK53_RS08725	0.19	-1.3
1,962,400	-		LRK53_RS08725	0.20	-0.4
1,962,400	-		LRK53_RS08725	0.20	-0.1
1,962,447	-		LRK53_RS08725	0.22	-1.2
1,962,468	+		LRK53_RS08725	0.23	+0.3
1,962,468	+		LRK53_RS08725	0.23	-2.0
1,962,468	+		LRK53_RS08725	0.23	+0.2
1,962,468	+		LRK53_RS08725	0.23	-0.2
1,962,468	+		LRK53_RS08725	0.23	-0.9
1,962,469	-		LRK53_RS08725	0.23	+0.9
1,962,469	-		LRK53_RS08725	0.23	-0.3
1,962,469	-		LRK53_RS08725	0.23	-1.9
1,962,469	-		LRK53_RS08725	0.23	-0.9
1,962,469	-		LRK53_RS08725	0.23	-2.8
1,962,469	-		LRK53_RS08725	0.23	-0.1
1,962,579	+		LRK53_RS08725	0.28	-0.1
1,962,579	+		LRK53_RS08725	0.28	-1.1
1,962,579	+		LRK53_RS08725	0.28	-1.4
1,962,579	+		LRK53_RS08725	0.28	-0.7
1,962,580	-		LRK53_RS08725	0.28	-1.7
1,962,669	+		LRK53_RS08725	0.32	-1.5
1,962,669	+		LRK53_RS08725	0.32	+1.5
1,962,670	-		LRK53_RS08725	0.32	-1.5
1,962,670	-		LRK53_RS08725	0.32	-3.0
1,962,670	-		LRK53_RS08725	0.32	-0.9
1,962,678	+		LRK53_RS08725	0.32	+2.2
1,962,678	+		LRK53_RS08725	0.32	-1.0
1,962,752	+		LRK53_RS08725	0.35	-0.1
1,962,753	-		LRK53_RS08725	0.35	-1.0
1,962,753	-		LRK53_RS08725	0.35	+2.5
1,962,753	-		LRK53_RS08725	0.35	+0.9
1,962,753	-		LRK53_RS08725	0.35	-0.8
1,962,753	-		LRK53_RS08725	0.35	-0.9
1,962,753	-		LRK53_RS08725	0.35	-0.6
1,962,753	-		LRK53_RS08725	0.35	+0.9
1,962,861	+		LRK53_RS08725	0.40	-0.7
1,962,861	+		LRK53_RS08725	0.40	+1.3