Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS16280 and LRK53_RS16285 are separated by 26 nucleotides LRK53_RS16285 and LRK53_RS16290 are separated by 42 nucleotides LRK53_RS16290 and LRK53_RS16300 are separated by 752 nucleotides
LRK53_RS16280: LRK53_RS16280 - cell division protein FtsL, at 3,586,267 to 3,586,506
_RS16280
LRK53_RS16285: LRK53_RS16285 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH, at 3,586,533 to 3,587,459
_RS16285
LRK53_RS16290: LRK53_RS16290 - division/cell wall cluster transcriptional repressor MraZ, at 3,587,502 to 3,587,957
_RS16290
LRK53_RS16300: LRK53_RS16300 - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 3,588,710 to 3,589,540
_RS16300
Position (kb)
3587
3588 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3587.504 kb on - strand at 3587.504 kb on - strand at 3587.504 kb on - strand at 3587.798 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3587.837 kb on - strand, within LRK53_RS16290 at 3588.650 kb on + strand at 3588.650 kb on + strand at 3588.650 kb on + strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.651 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand at 3588.721 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM remove 3,587,504 - -0.1 3,587,504 - +0.9 3,587,504 - -0.7 3,587,798 - LRK53_RS16290 0.65 -1.0 3,587,837 - LRK53_RS16290 0.73 -2.2 3,587,837 - LRK53_RS16290 0.73 +0.6 3,587,837 - LRK53_RS16290 0.73 +0.3 3,587,837 - LRK53_RS16290 0.73 -2.5 3,587,837 - LRK53_RS16290 0.73 -1.5 3,587,837 - LRK53_RS16290 0.73 +1.3 3,587,837 - LRK53_RS16290 0.73 -1.8 3,587,837 - LRK53_RS16290 0.73 -0.2 3,587,837 - LRK53_RS16290 0.73 -1.0 3,587,837 - LRK53_RS16290 0.73 -0.2 3,588,650 + +0.3 3,588,650 + +0.9 3,588,650 + -0.2 3,588,651 - +1.3 3,588,651 - -0.7 3,588,651 - -0.7 3,588,651 - -0.7 3,588,651 - +0.1 3,588,651 - -0.7 3,588,651 - +0.0 3,588,651 - -1.1 3,588,651 - -1.0 3,588,651 - +1.8 3,588,651 - -0.5 3,588,651 - +0.3 3,588,651 - -0.2 3,588,651 - -0.5 3,588,651 - -0.7 3,588,721 - -0.7 3,588,721 - -0.7 3,588,721 - -0.5 3,588,721 - -0.5 3,588,721 - -0.2
Or see this region's nucleotide sequence