Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07645

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
1,707,835	+				-0.3
1,707,835	+				-0.3
1,707,835	+				+0.2
1,707,836	-				+0.2
1,707,891	-				+1.2
1,707,939	+				-0.3
1,707,939	+				+0.2
1,707,939	+				-0.1
1,707,939	+				-0.6
1,707,939	+				-0.9
1,707,940	-				-0.1
1,707,940	-				-0.3
1,707,940	-				+0.5
1,707,940	-				-0.3
1,707,940	-				-0.7
1,707,940	-				-0.6
1,707,940	-				-0.3
1,707,940	-				-0.5
1,707,940	-				+0.4
1,707,940	-				-0.8
1,708,158	+		LRK53_RS07640	0.11	+0.7
1,708,158	+		LRK53_RS07640	0.11	+1.7
1,708,158	+		LRK53_RS07640	0.11	-0.1
1,708,158	+		LRK53_RS07640	0.11	+0.6
1,708,158	+		LRK53_RS07640	0.11	-0.8
1,708,158	+		LRK53_RS07640	0.11	+0.2
1,708,159	-		LRK53_RS07640	0.12	+2.2
1,708,159	-		LRK53_RS07640	0.12	-0.9
1,708,159	-		LRK53_RS07640	0.12	+2.2
1,708,159	-		LRK53_RS07640	0.12	-0.3
1,708,159	-		LRK53_RS07640	0.12	-1.5
1,708,159	-		LRK53_RS07640	0.12	-0.2
1,708,159	-		LRK53_RS07640	0.12	+0.2
1,708,159	-		LRK53_RS07640	0.12	-1.5
1,708,159	-		LRK53_RS07640	0.12	+0.2
1,708,159	-		LRK53_RS07640	0.12	+0.2
1,708,159	-		LRK53_RS07640	0.12	-2.6
1,708,317	+		LRK53_RS07640	0.40	+1.2
1,708,317	+		LRK53_RS07640	0.40	+1.2
1,708,317	+		LRK53_RS07640	0.40	-0.3
1,708,317	+		LRK53_RS07640	0.40	+1.2
1,708,317	+		LRK53_RS07640	0.40	-0.8
1,708,317	+		LRK53_RS07640	0.40	-1.1
1,708,317	+		LRK53_RS07640	0.40	-0.6
1,708,317	+		LRK53_RS07640	0.40	-0.3
1,708,317	+		LRK53_RS07640	0.40	+0.4
1,708,317	+		LRK53_RS07640	0.40	+0.2
1,708,317	+		LRK53_RS07640	0.40	-0.3
1,708,317	+		LRK53_RS07640	0.40	+0.2
1,708,317	+		LRK53_RS07640	0.40	-1.0
1,708,317	+		LRK53_RS07640	0.40	-1.2
1,708,318	-		LRK53_RS07640	0.40	-0.2
1,708,318	-		LRK53_RS07640	0.40	-1.1
1,708,318	-		LRK53_RS07640	0.40	-0.8
1,708,318	-		LRK53_RS07640	0.40	+0.7
1,708,318	-		LRK53_RS07640	0.40	-0.6
1,708,318	-		LRK53_RS07640	0.40	-1.8
1,708,318	-		LRK53_RS07640	0.40	+0.0
1,708,318	-		LRK53_RS07640	0.40	+1.4
1,708,318	-		LRK53_RS07640	0.40	-0.3
1,708,318	-		LRK53_RS07640	0.40	-0.2
1,708,318	-		LRK53_RS07640	0.40	+0.2
1,708,318	-		LRK53_RS07640	0.40	-0.7
1,708,318	-		LRK53_RS07640	0.40	-0.8
1,708,318	-		LRK53_RS07640	0.40	-1.3
1,708,318	-		LRK53_RS07640	0.40	-0.0
1,708,318	-		LRK53_RS07640	0.40	-1.8
1,708,318	-		LRK53_RS07640	0.40	-0.6
1,708,318	-		LRK53_RS07640	0.40	+1.2
1,708,318	-		LRK53_RS07640	0.40	+0.2
1,708,318	-		LRK53_RS07640	0.40	-1.4
1,708,318	-		LRK53_RS07640	0.40	+1.2
1,708,318	-		LRK53_RS07640	0.40	-0.3
1,708,320	+		LRK53_RS07640	0.40	+0.2
1,708,320	+		LRK53_RS07640	0.40	+1.2
1,708,321	-		LRK53_RS07640	0.40	+1.2
1,708,321	-		LRK53_RS07640	0.40	+0.2
1,708,344	+		LRK53_RS07640	0.44	-0.6
1,708,345	-		LRK53_RS07640	0.45	-3.5
1,708,345	-		LRK53_RS07640	0.45	-0.8
1,708,345	-		LRK53_RS07640	0.45	-0.5
1,708,384	-		LRK53_RS07640	0.51	-0.3
1,708,392	+		LRK53_RS07640	0.53	-1.3
1,708,393	-		LRK53_RS07640	0.53	-1.4
1,708,393	-		LRK53_RS07640	0.53	-0.9
1,708,393	-		LRK53_RS07640	0.53	-0.9
1,708,393	-		LRK53_RS07640	0.53	-0.3
1,708,393	-		LRK53_RS07640	0.53	-0.6
1,708,393	-		LRK53_RS07640	0.53	+0.6
1,708,434	+		LRK53_RS07640	0.60	+1.2
1,708,434	+		LRK53_RS07640	0.60	-0.8
1,708,434	+		LRK53_RS07640	0.60	-1.3
1,708,434	+		LRK53_RS07640	0.60	-0.9
1,708,435	-		LRK53_RS07640	0.60	+1.8
1,708,435	-		LRK53_RS07640	0.60	+2.2
1,708,435	-		LRK53_RS07640	0.60	-0.6
1,708,435	-		LRK53_RS07640	0.60	-0.3
1,708,435	-		LRK53_RS07640	0.60	-1.6
1,708,435	-		LRK53_RS07640	0.60	+0.7
1,708,435	-		LRK53_RS07640	0.60	+0.3
1,708,435	-		LRK53_RS07640	0.60	-0.7
1,708,435	-		LRK53_RS07640	0.60	-0.8
1,708,435	-		LRK53_RS07640	0.60	+0.4
1,708,506	+		LRK53_RS07640	0.73	+1.2
1,708,506	+		LRK53_RS07640	0.73	-3.4
1,708,506	+		LRK53_RS07640	0.73	+1.2
1,708,507	-		LRK53_RS07640	0.73	-0.2
1,708,507	-		LRK53_RS07640	0.73	+0.6
1,708,507	-		LRK53_RS07640	0.73	+1.8
1,708,507	-		LRK53_RS07640	0.73	+1.2
1,708,507	-		LRK53_RS07640	0.73	+0.2
1,708,507	-		LRK53_RS07640	0.73	+0.2
1,708,507	-		LRK53_RS07640	0.73	+2.2
1,708,507	-		LRK53_RS07640	0.73	-1.7
1,708,507	-		LRK53_RS07640	0.73	+0.4
1,708,507	-		LRK53_RS07640	0.73	+0.2
1,708,507	-		LRK53_RS07640	0.73	-0.8
1,708,507	-		LRK53_RS07640	0.73	+1.2
1,708,507	-		LRK53_RS07640	0.73	-1.8
1,708,507	-		LRK53_RS07640	0.73	-0.8
1,708,507	-		LRK53_RS07640	0.73	-1.3
1,708,530	+		LRK53_RS07640	0.77	+0.2
1,708,530	+		LRK53_RS07640	0.77	+0.2
1,708,530	+		LRK53_RS07640	0.77	+1.8
1,708,530	+		LRK53_RS07640	0.77	+0.8
1,708,530	+		LRK53_RS07640	0.77	-1.1
1,708,530	+		LRK53_RS07640	0.77	+0.1
1,708,530	+		LRK53_RS07640	0.77	-0.6
1,708,530	+		LRK53_RS07640	0.77	+0.2
1,708,530	+		LRK53_RS07640	0.77	+0.5
1,708,530	+		LRK53_RS07640	0.77	-2.8
1,708,530	+		LRK53_RS07640	0.77	-0.1
1,708,530	+		LRK53_RS07640	0.77	+0.7
1,708,530	+		LRK53_RS07640	0.77	+0.2
1,708,530	+		LRK53_RS07640	0.77	-0.2
1,708,530	+		LRK53_RS07640	0.77	-1.1
1,708,530	+		LRK53_RS07640	0.77	-0.7
1,708,531	-		LRK53_RS07640	0.77	+0.2
1,708,531	-		LRK53_RS07640	0.77	-1.6
1,708,531	-		LRK53_RS07640	0.77	-1.0
1,708,531	-		LRK53_RS07640	0.77	+0.8
1,708,531	-		LRK53_RS07640	0.77	-0.3
1,708,531	-		LRK53_RS07640	0.77	+1.2
1,708,531	-		LRK53_RS07640	0.77	-0.1
1,708,531	-		LRK53_RS07640	0.77	-0.1
1,708,531	-		LRK53_RS07640	0.77	+1.8
1,708,531	-		LRK53_RS07640	0.77	-0.6
1,708,531	-		LRK53_RS07640	0.77	+1.5
1,708,531	-		LRK53_RS07640	0.77	+0.1
1,708,531	-		LRK53_RS07640	0.77	-0.8
1,708,531	-		LRK53_RS07640	0.77	-0.3
1,708,531	-		LRK53_RS07640	0.77	-0.8
1,708,531	-		LRK53_RS07640	0.77	+1.2
1,708,531	-		LRK53_RS07640	0.77	-0.6
1,708,531	-		LRK53_RS07640	0.77	-0.3
1,708,531	-		LRK53_RS07640	0.77	+0.5
1,708,602	+				-0.1
1,708,602	+				-1.6
1,708,603	-				+2.2
1,708,736	+				-0.3
1,708,736	+				+0.1
1,708,736	+				+1.2
1,708,737	-				-0.8
1,708,737	-				-0.2
1,708,737	-				-0.6
1,708,737	-				-0.8
1,708,737	-				-2.1
1,708,737	-				-0.8
1,708,770	+				+0.2
1,708,771	-				-0.6
1,708,771	-				+0.7
1,708,824	+				-0.2
1,708,824	+				+1.2
1,708,824	+				+2.6
1,708,824	+				-1.0
1,708,824	+				-0.3
1,708,824	+				-0.8
1,708,824	+				-1.3
1,708,825	-				-1.9
1,708,825	-				-1.1
1,709,055	+		LRK53_RS07645	0.37	+1.8
1,709,056	-		LRK53_RS07645	0.37	-0.1
1,709,056	-		LRK53_RS07645	0.37	+1.2
1,709,056	-		LRK53_RS07645	0.37	-1.4
1,709,082	+		LRK53_RS07645	0.41	-1.8
1,709,082	+		LRK53_RS07645	0.41	-0.8
1,709,082	+		LRK53_RS07645	0.41	-0.6
1,709,082	+		LRK53_RS07645	0.41	+0.2
1,709,082	+		LRK53_RS07645	0.41	+1.2
1,709,082	+		LRK53_RS07645	0.41	-2.6
1,709,083	-		LRK53_RS07645	0.41	-0.8
1,709,083	-		LRK53_RS07645	0.41	+0.2
1,709,083	-		LRK53_RS07645	0.41	-2.1
1,709,536	+				+1.2
1,709,536	+				+1.2
1,709,536	+				-1.3
1,709,536	+				+0.2
1,709,537	-				-0.3
1,709,537	-				-1.1
1,709,537	-				-1.8
1,709,576	+				-0.5
1,709,704	+				-0.4
1,709,705	-				-1.8
1,709,705	-				-1.5
1,709,730	+				+0.6
1,709,730	+				-0.6
1,709,730	+				+1.2
1,709,730	+				-1.4
1,709,730	+				+0.6
1,709,730	+				-0.6
1,709,730	+				+0.2
1,709,730	+				+0.1
1,709,731	-				+1.2
1,709,731	-				-1.7
1,709,731	-				-0.6
1,709,731	-				-1.8
1,709,731	-				+1.2
1,709,731	-				-0.1
1,709,731	-				+1.2
1,709,731	-				+1.2
1,709,731	-				-0.4
1,709,731	-				+1.2
1,709,731	-				+0.2
1,709,731	-				+2.2
1,709,731	-				-0.4
1,709,731	-				-0.6
1,709,762	+				-0.8
1,709,762	+				+0.2
1,709,762	+				-0.4
1,709,762	+				+0.2
1,709,762	+				-1.0
1,709,762	+				-0.9
1,709,762	+				+1.2
1,709,762	+				-0.8
1,709,762	+				+0.1
1,709,762	+				+1.2
1,709,762	+				+2.6
1,709,762	+				+0.4
1,709,762	+				+1.2
1,709,763	-				-0.1
1,709,763	-				-1.1
1,709,763	-				-1.8
1,709,763	-				+0.2
1,709,763	-				+1.8
1,709,763	-				-1.6
1,709,763	-				-0.8
1,709,763	-				-0.1
1,709,763	-				+0.9
1,709,866	+		LRK53_RS07650	0.25	-0.9
1,709,866	+		LRK53_RS07650	0.25	+0.2
1,709,921	-		LRK53_RS07650	0.37	-0.2
1,709,992	+		LRK53_RS07650	0.52	+0.5
1,709,992	+		LRK53_RS07650	0.52	+0.2
1,709,992	+		LRK53_RS07650	0.52	-0.1
1,709,992	+		LRK53_RS07650	0.52	-0.8
1,709,993	-		LRK53_RS07650	0.52	-0.6
1,709,993	-		LRK53_RS07650	0.52	-1.6
1,709,993	-		LRK53_RS07650	0.52	+0.5
1,709,993	-		LRK53_RS07650	0.52	-1.4
1,709,993	-		LRK53_RS07650	0.52	-0.8
1,709,993	-		LRK53_RS07650	0.52	+2.2
1,709,993	-		LRK53_RS07650	0.52	-0.5
1,709,993	-		LRK53_RS07650	0.52	+0.2
1,709,993	-		LRK53_RS07650	0.52	+0.2
1,710,031	+		LRK53_RS07650	0.61	-2.2
1,710,031	+		LRK53_RS07650	0.61	+0.3
1,710,031	+		LRK53_RS07650	0.61	-0.8
1,710,031	+		LRK53_RS07650	0.61	+0.2
1,710,031	+		LRK53_RS07650	0.61	+0.2
1,710,031	+		LRK53_RS07650	0.61	+0.2
1,710,031	+		LRK53_RS07650	0.61	-0.8
1,710,031	+		LRK53_RS07650	0.61	+0.2
1,710,032	-		LRK53_RS07650	0.61	+0.2
1,710,032	-		LRK53_RS07650	0.61	+0.6
1,710,032	-		LRK53_RS07650	0.61	-0.2
1,710,032	-		LRK53_RS07650	0.61	-0.8
1,710,032	-		LRK53_RS07650	0.61	+0.6
1,710,032	-		LRK53_RS07650	0.61	-1.6
1,710,032	-		LRK53_RS07650	0.61	+0.2
1,710,032	-		LRK53_RS07650	0.61	+0.0
1,710,032	-		LRK53_RS07650	0.61	-2.0
1,710,046	+		LRK53_RS07650	0.64	+0.0
1,710,046	+		LRK53_RS07650	0.64	-0.8
1,710,046	+		LRK53_RS07650	0.64	+0.0
1,710,061	+		LRK53_RS07650	0.67	+0.5
1,710,061	+		LRK53_RS07650	0.67	-0.4
1,710,062	-		LRK53_RS07650	0.67	-0.1
1,710,076	+		LRK53_RS07650	0.70	-0.8
1,710,085	+		LRK53_RS07650	0.72	-0.4
1,710,085	+		LRK53_RS07650	0.72	+2.2
1,710,085	+		LRK53_RS07650	0.72	-0.2
1,710,085	+		LRK53_RS07650	0.72	+1.2
1,710,085	+		LRK53_RS07650	0.72	-1.1
1,710,086	-		LRK53_RS07650	0.72	+0.8
1,710,086	-		LRK53_RS07650	0.72	-1.0
1,710,086	-		LRK53_RS07650	0.72	-2.1
1,710,086	-		LRK53_RS07650	0.72	+0.1
1,710,086	-		LRK53_RS07650	0.72	+2.2
1,710,086	-		LRK53_RS07650	0.72	+1.2
1,710,086	-		LRK53_RS07650	0.72	-0.3
1,710,086	-		LRK53_RS07650	0.72	-0.4
1,710,086	-		LRK53_RS07650	0.72	+1.2
1,710,086	-		LRK53_RS07650	0.72	+0.2
1,710,086	-		LRK53_RS07650	0.72	-1.1
1,710,157	+		LRK53_RS07650	0.88	+0.4
1,710,157	+		LRK53_RS07650	0.88	+0.2
1,710,157	+		LRK53_RS07650	0.88	-1.8
1,710,157	+		LRK53_RS07650	0.88	-0.4
1,710,157	+		LRK53_RS07650	0.88	-0.4
1,710,158	-		LRK53_RS07650	0.88	-1.2
1,710,158	-		LRK53_RS07650	0.88	-0.4
1,710,158	-		LRK53_RS07650	0.88	+0.2
1,710,158	-		LRK53_RS07650	0.88	+0.8
1,710,158	-		LRK53_RS07650	0.88	-0.7
1,710,158	-		LRK53_RS07650	0.88	+1.2
1,710,211	+				+0.2
1,710,212	-				-1.3
1,710,212	-				+0.6
1,710,212	-				+1.2
1,710,212	-				+2.2
1,710,212	-				-0.4
1,710,269	+				+0.5
1,710,269	+				-0.9
1,710,288	-				+0.1
1,710,359	+				+0.6
1,710,359	+				-0.8
1,710,511	+		LRK53_RS07655	0.24	-0.4
1,710,511	+		LRK53_RS07655	0.24	+1.8
1,710,512	-		LRK53_RS07655	0.24	+2.5
1,710,512	-		LRK53_RS07655	0.24	+0.7
1,710,512	-		LRK53_RS07655	0.24	+0.4