Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06955

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
1,567,482	-		LRK53_RS06945	0.51	+0.8
1,567,482	-		LRK53_RS06945	0.51	-1.1
1,567,482	-		LRK53_RS06945	0.51	+0.2
1,567,598	+		LRK53_RS06945	0.60	+0.2
1,567,598	+		LRK53_RS06945	0.60	-1.3
1,567,598	+		LRK53_RS06945	0.60	-0.6
1,567,599	-		LRK53_RS06945	0.61	-0.8
1,567,599	-		LRK53_RS06945	0.61	-0.8
1,567,599	-		LRK53_RS06945	0.61	+0.2
1,567,599	-		LRK53_RS06945	0.61	+1.2
1,567,599	-		LRK53_RS06945	0.61	-0.8
1,567,599	-		LRK53_RS06945	0.61	-1.1
1,567,599	-		LRK53_RS06945	0.61	-2.2
1,567,599	-		LRK53_RS06945	0.61	-1.3
1,567,599	-		LRK53_RS06945	0.61	-1.9
1,567,599	-		LRK53_RS06945	0.61	+0.2
1,567,599	-		LRK53_RS06945	0.61	-0.2
1,567,619	+		LRK53_RS06945	0.62	+0.2
1,567,915	+		LRK53_RS06945	0.86	-3.2
1,567,915	+		LRK53_RS06945	0.86	+0.2
1,568,430	+				+0.1
1,568,430	+				+0.2
1,568,431	-				+0.7
1,568,431	-				-1.6
1,568,431	-				+0.2
1,568,444	+				-0.3
1,568,444	+				-0.8
1,568,444	+				-1.8
1,568,444	+				-0.3
1,568,445	-				-1.2
1,568,445	-				-2.6
1,568,445	-				-1.3
1,568,445	-				-0.9
1,568,626	+		LRK53_RS06955	0.17	-1.1
1,568,690	-		LRK53_RS06955	0.23	-0.1
1,568,929	+		LRK53_RS06955	0.45	-1.5
1,568,929	+		LRK53_RS06955	0.45	-2.3
1,568,929	+		LRK53_RS06955	0.45	+1.0
1,568,929	+		LRK53_RS06955	0.45	-0.6
1,568,929	+		LRK53_RS06955	0.45	-1.5
1,568,929	+		LRK53_RS06955	0.45	+0.8
1,568,929	+		LRK53_RS06955	0.45	+1.2
1,568,929	+		LRK53_RS06955	0.45	-1.9
1,568,929	+		LRK53_RS06955	0.45	+1.0
1,568,929	+		LRK53_RS06955	0.45	-2.2
1,568,930	-		LRK53_RS06955	0.45	+0.2
1,568,930	-		LRK53_RS06955	0.45	-0.1
1,568,930	-		LRK53_RS06955	0.45	+0.2
1,568,930	-		LRK53_RS06955	0.45	-0.3
1,568,930	-		LRK53_RS06955	0.45	+0.7
1,568,930	-		LRK53_RS06955	0.45	-1.5
1,569,082	+		LRK53_RS06955	0.59	+0.2
1,569,082	+		LRK53_RS06955	0.59	-0.8
1,569,082	+		LRK53_RS06955	0.59	-0.2
1,569,082	+		LRK53_RS06955	0.59	-1.6
1,569,082	+		LRK53_RS06955	0.59	-0.8
1,569,082	+		LRK53_RS06955	0.59	-1.3
1,569,082	+		LRK53_RS06955	0.59	+1.2
1,569,082	+		LRK53_RS06955	0.59	-0.8
1,569,083	-		LRK53_RS06955	0.59	-0.8
1,569,083	-		LRK53_RS06955	0.59	-0.6
1,569,083	-		LRK53_RS06955	0.59	+1.2
1,569,083	-		LRK53_RS06955	0.59	-0.1
1,569,083	-		LRK53_RS06955	0.59	+0.2
1,569,083	-		LRK53_RS06955	0.59	-2.5
1,569,083	-		LRK53_RS06955	0.59	+0.7
1,569,083	-		LRK53_RS06955	0.59	+0.7
1,569,176	-		LRK53_RS06955	0.68	-1.1
1,569,176	-		LRK53_RS06955	0.68	-1.8
1,569,214	+		LRK53_RS06955	0.71	+0.2
1,569,214	+		LRK53_RS06955	0.71	+0.7
1,569,214	+		LRK53_RS06955	0.71	+1.2
1,569,214	+		LRK53_RS06955	0.71	-1.1
1,569,215	-		LRK53_RS06955	0.72	+0.4
1,569,215	-		LRK53_RS06955	0.72	+0.8
1,569,215	-		LRK53_RS06955	0.72	-3.1
1,569,215	-		LRK53_RS06955	0.72	-0.5
1,569,244	+		LRK53_RS06955	0.74	+1.2
1,569,244	+		LRK53_RS06955	0.74	+0.2
1,569,244	+		LRK53_RS06955	0.74	-1.3
1,569,244	+		LRK53_RS06955	0.74	+2.2
1,569,244	+		LRK53_RS06955	0.74	-1.3
1,569,244	+		LRK53_RS06955	0.74	-1.1
1,569,244	+		LRK53_RS06955	0.74	-1.3
1,569,244	+		LRK53_RS06955	0.74	-0.6
1,569,244	+		LRK53_RS06955	0.74	+0.4
1,569,244	+		LRK53_RS06955	0.74	-2.1
1,569,244	+		LRK53_RS06955	0.74	-1.1
1,569,244	+		LRK53_RS06955	0.74	-2.5
1,569,244	+		LRK53_RS06955	0.74	-0.6
1,569,245	-		LRK53_RS06955	0.74	-2.3
1,569,245	-		LRK53_RS06955	0.74	-0.3
1,569,245	-		LRK53_RS06955	0.74	+0.2
1,569,245	-		LRK53_RS06955	0.74	+0.2
1,569,245	-		LRK53_RS06955	0.74	-1.4
1,569,245	-		LRK53_RS06955	0.74	+0.7
1,569,245	-		LRK53_RS06955	0.74	+0.2
1,569,245	-		LRK53_RS06955	0.74	-1.6
1,569,245	-		LRK53_RS06955	0.74	-1.1
1,569,245	-		LRK53_RS06955	0.74	+0.2
1,569,245	-		LRK53_RS06955	0.74	-0.0
1,569,245	-		LRK53_RS06955	0.74	-2.1
1,569,245	-		LRK53_RS06955	0.74	-0.8
1,569,245	-		LRK53_RS06955	0.74	+1.2
1,569,245	-		LRK53_RS06955	0.74	+0.2
1,569,286	+		LRK53_RS06955	0.78	-0.2
1,569,286	+		LRK53_RS06955	0.78	-2.5
1,569,286	+		LRK53_RS06955	0.78	-0.9
1,569,286	+		LRK53_RS06955	0.78	+1.2
1,569,287	-		LRK53_RS06955	0.78	+0.2
1,569,287	-		LRK53_RS06955	0.78	-1.3
1,569,287	-		LRK53_RS06955	0.78	-0.1
1,569,287	-		LRK53_RS06955	0.78	-0.9
1,569,343	+		LRK53_RS06955	0.83	-0.3
1,569,343	+		LRK53_RS06955	0.83	+0.2
1,569,343	+		LRK53_RS06955	0.83	+0.7
1,569,343	+		LRK53_RS06955	0.83	-0.8
1,569,343	+		LRK53_RS06955	0.83	-2.5
1,569,344	-		LRK53_RS06955	0.84	-0.6
1,569,344	-		LRK53_RS06955	0.84	+1.2
1,569,344	-		LRK53_RS06955	0.84	-1.5
1,569,344	-		LRK53_RS06955	0.84	+0.2
1,569,344	-		LRK53_RS06955	0.84	-1.1
1,569,344	-		LRK53_RS06955	0.84	+0.2
1,569,344	-		LRK53_RS06955	0.84	+0.2
1,569,344	-		LRK53_RS06955	0.84	-1.3
1,569,418	+				-1.9
1,569,418	+				-1.3
1,569,418	+				-2.6
1,569,419	-				-1.2
1,569,419	-				-1.3
1,569,419	-				-1.6
1,570,405	+				-0.8
1,570,405	+				-0.1
1,570,405	+				-1.6
1,570,405	+				-0.3
1,570,406	-				-1.0
1,570,406	-				-0.4
1,570,406	-				-0.8
1,570,406	-				-0.9
1,570,415	-				+0.7
1,570,415	-				-1.1
1,570,415	-				+0.7
1,570,415	-				+1.2
1,570,415	-				-0.8
1,570,415	-				+0.1
1,570,415	-				-1.8
1,570,415	-				-2.2
1,570,417	+				-1.4
1,570,417	+				-0.8
1,570,417	+				+1.2
1,570,417	+				+0.1
1,570,417	+				-0.3
1,570,417	+				-0.3
1,570,417	+				-2.8
1,570,417	+				-2.2
1,570,417	+				-0.3
1,570,417	+				+0.2
1,570,417	+				-1.8
1,570,418	-				+1.2
1,570,418	-				-0.4
1,570,418	-				+0.7
1,570,418	-				+1.2
1,570,418	-				-0.8
1,570,418	-				-1.5
1,570,418	-				-1.1
1,570,418	-				-0.8
1,570,438	-				-0.9
1,570,438	-				+0.0
1,570,438	-				+1.2
1,570,438	-				-1.2
1,570,438	-				+0.2
1,570,438	-				-0.2
1,570,438	-				+0.2
1,570,438	-				-1.3
1,570,438	-				-0.3
1,570,438	-				+2.2
1,570,438	-				-0.9
1,570,438	-				+1.2
1,570,438	-				-0.8
1,570,438	-				-1.7
1,570,438	-				-0.9
1,570,438	-				-0.4
1,570,442	-				-1.6
1,570,442	-				-0.9
1,570,442	-				-1.2
1,570,442	-				-1.1
1,570,442	-				-0.7
1,570,442	-				-0.3
1,570,442	-				-0.2
1,570,442	-				-0.3
1,570,442	-				+0.7
1,570,442	-				+0.1
1,570,442	-				-0.8
1,570,442	-				-1.0
1,570,442	-				-0.8
1,570,442	-				+0.2
1,570,442	-				-0.3
1,570,442	-				+0.5
1,570,442	-				+0.2
1,570,485	+				+1.2