Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS00290 and LRK53_RS00295 are separated by 50 nucleotides LRK53_RS00295 and LRK53_RS00300 are separated by 42 nucleotides
LRK53_RS00290: LRK53_RS00290 - Xaa-Pro peptidase family protein, at 67,494 to 68,855
_RS00290
LRK53_RS00295: LRK53_RS00295 - hypothetical protein, at 68,906 to 69,151
_RS00295
LRK53_RS00300: LRK53_RS00300 - undecaprenyl-diphosphate phosphatase, at 69,194 to 69,991
_RS00300
Position (kb) 68
69
70 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 67.917 kb on + strand, within LRK53_RS00290 at 67.917 kb on + strand, within LRK53_RS00290 at 67.917 kb on + strand, within LRK53_RS00290 at 67.917 kb on + strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 67.918 kb on - strand, within LRK53_RS00290 at 68.008 kb on - strand, within LRK53_RS00290 at 68.078 kb on - strand, within LRK53_RS00290 at 68.078 kb on - strand, within LRK53_RS00290 at 68.078 kb on - strand, within LRK53_RS00290 at 68.078 kb on - strand, within LRK53_RS00290 at 68.226 kb on + strand, within LRK53_RS00290 at 68.226 kb on + strand, within LRK53_RS00290 at 68.226 kb on + strand, within LRK53_RS00290 at 68.227 kb on - strand, within LRK53_RS00290 at 68.298 kb on + strand, within LRK53_RS00290 at 68.299 kb on - strand, within LRK53_RS00290 at 68.346 kb on + strand, within LRK53_RS00290 at 68.347 kb on - strand, within LRK53_RS00290 at 68.401 kb on + strand, within LRK53_RS00290 at 68.437 kb on - strand, within LRK53_RS00290 at 68.437 kb on - strand, within LRK53_RS00290 at 68.456 kb on + strand, within LRK53_RS00290 at 68.456 kb on + strand, within LRK53_RS00290 at 68.457 kb on - strand, within LRK53_RS00290 at 68.497 kb on + strand, within LRK53_RS00290 at 68.497 kb on + strand, within LRK53_RS00290 at 68.497 kb on + strand, within LRK53_RS00290 at 68.497 kb on + strand, within LRK53_RS00290 at 68.498 kb on - strand, within LRK53_RS00290 at 68.620 kb on - strand, within LRK53_RS00290 at 68.625 kb on + strand, within LRK53_RS00290 at 68.625 kb on + strand, within LRK53_RS00290 at 68.625 kb on + strand, within LRK53_RS00290 at 68.625 kb on + strand, within LRK53_RS00290 at 68.625 kb on + strand, within LRK53_RS00290 at 68.626 kb on - strand, within LRK53_RS00290 at 68.626 kb on - strand, within LRK53_RS00290 at 68.626 kb on - strand, within LRK53_RS00290 at 68.676 kb on + strand, within LRK53_RS00290 at 68.676 kb on + strand, within LRK53_RS00290 at 68.676 kb on + strand, within LRK53_RS00290 at 68.676 kb on + strand, within LRK53_RS00290 at 68.677 kb on - strand, within LRK53_RS00290 at 68.677 kb on - strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.679 kb on + strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.680 kb on - strand, within LRK53_RS00290 at 68.686 kb on + strand, within LRK53_RS00290 at 68.687 kb on - strand, within LRK53_RS00290 at 68.742 kb on - strand at 68.742 kb on - strand at 68.742 kb on - strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.745 kb on + strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.746 kb on - strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.787 kb on + strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.788 kb on - strand at 68.853 kb on + strand at 68.898 kb on + strand at 68.898 kb on + strand at 68.899 kb on - strand at 68.899 kb on - strand at 68.993 kb on + strand, within LRK53_RS00295 at 68.993 kb on + strand, within LRK53_RS00295 at 68.993 kb on + strand, within LRK53_RS00295 at 68.994 kb on - strand, within LRK53_RS00295 at 68.994 kb on - strand, within LRK53_RS00295 at 68.994 kb on - strand, within LRK53_RS00295 at 68.994 kb on - strand, within LRK53_RS00295 at 69.403 kb on - strand, within LRK53_RS00300 at 69.417 kb on + strand, within LRK53_RS00300 at 69.418 kb on - strand, within LRK53_RS00300 at 69.817 kb on - strand, within LRK53_RS00300 at 70.055 kb on + strand at 70.055 kb on + strand at 70.056 kb on - strand at 70.056 kb on - strand at 70.056 kb on - strand at 70.056 kb on - strand at 70.056 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride hemipentahydrate 128 uM remove 67,917 + LRK53_RS00290 0.31 +0.4 67,917 + LRK53_RS00290 0.31 -1.2 67,917 + LRK53_RS00290 0.31 +0.4 67,917 + LRK53_RS00290 0.31 -1.2 67,918 - LRK53_RS00290 0.31 +0.4 67,918 - LRK53_RS00290 0.31 +1.4 67,918 - LRK53_RS00290 0.31 +1.4 67,918 - LRK53_RS00290 0.31 +1.4 67,918 - LRK53_RS00290 0.31 -0.1 67,918 - LRK53_RS00290 0.31 -0.0 67,918 - LRK53_RS00290 0.31 -0.6 67,918 - LRK53_RS00290 0.31 +0.4 67,918 - LRK53_RS00290 0.31 +1.4 67,918 - LRK53_RS00290 0.31 -0.4 68,008 - LRK53_RS00290 0.38 -0.9 68,078 - LRK53_RS00290 0.43 +0.4 68,078 - LRK53_RS00290 0.43 -0.9 68,078 - LRK53_RS00290 0.43 -0.7 68,078 - LRK53_RS00290 0.43 +1.4 68,226 + LRK53_RS00290 0.54 +0.1 68,226 + LRK53_RS00290 0.54 -1.5 68,226 + LRK53_RS00290 0.54 -0.2 68,227 - LRK53_RS00290 0.54 -1.2 68,298 + LRK53_RS00290 0.59 -1.8 68,299 - LRK53_RS00290 0.59 -0.7 68,346 + LRK53_RS00290 0.63 -0.8 68,347 - LRK53_RS00290 0.63 +0.2 68,401 + LRK53_RS00290 0.67 -0.9 68,437 - LRK53_RS00290 0.69 -2.8 68,437 - LRK53_RS00290 0.69 +2.4 68,456 + LRK53_RS00290 0.71 +0.8 68,456 + LRK53_RS00290 0.71 -0.4 68,457 - LRK53_RS00290 0.71 +0.8 68,497 + LRK53_RS00290 0.74 -0.2 68,497 + LRK53_RS00290 0.74 +1.6 68,497 + LRK53_RS00290 0.74 -0.9 68,497 + LRK53_RS00290 0.74 +1.4 68,498 - LRK53_RS00290 0.74 -0.9 68,620 - LRK53_RS00290 0.83 +0.1 68,625 + LRK53_RS00290 0.83 +1.4 68,625 + LRK53_RS00290 0.83 -1.2 68,625 + LRK53_RS00290 0.83 -0.1 68,625 + LRK53_RS00290 0.83 -1.3 68,625 + LRK53_RS00290 0.83 +1.4 68,626 - LRK53_RS00290 0.83 -0.8 68,626 - LRK53_RS00290 0.83 -0.6 68,626 - LRK53_RS00290 0.83 +0.8 68,676 + LRK53_RS00290 0.87 -1.6 68,676 + LRK53_RS00290 0.87 -0.3 68,676 + LRK53_RS00290 0.87 +1.4 68,676 + LRK53_RS00290 0.87 -0.2 68,677 - LRK53_RS00290 0.87 +1.4 68,677 - LRK53_RS00290 0.87 +1.4 68,679 + LRK53_RS00290 0.87 -0.6 68,679 + LRK53_RS00290 0.87 -0.4 68,679 + LRK53_RS00290 0.87 +1.4 68,679 + LRK53_RS00290 0.87 -2.1 68,679 + LRK53_RS00290 0.87 -1.4 68,679 + LRK53_RS00290 0.87 -1.9 68,679 + LRK53_RS00290 0.87 -0.0 68,680 - LRK53_RS00290 0.87 +0.7 68,680 - LRK53_RS00290 0.87 -0.1 68,680 - LRK53_RS00290 0.87 +2.4 68,680 - LRK53_RS00290 0.87 -1.1 68,680 - LRK53_RS00290 0.87 +0.4 68,680 - LRK53_RS00290 0.87 -1.6 68,680 - LRK53_RS00290 0.87 -1.4 68,680 - LRK53_RS00290 0.87 +1.4 68,680 - LRK53_RS00290 0.87 +0.2 68,686 + LRK53_RS00290 0.88 +0.4 68,687 - LRK53_RS00290 0.88 +1.4 68,742 - +0.7 68,742 - -0.0 68,742 - +0.4 68,745 + +0.8 68,745 + -0.3 68,745 + -0.6 68,745 + -0.2 68,745 + +0.4 68,745 + +0.1 68,745 + -0.2 68,745 + -1.6 68,745 + +1.4 68,745 + +0.8 68,745 + +0.4 68,745 + -0.2 68,745 + -0.2 68,745 + +0.4 68,745 + -0.9 68,745 + -1.1 68,745 + +1.4 68,745 + +1.4 68,745 + -0.2 68,745 + -1.8 68,745 + +1.4 68,745 + -0.6 68,745 + -0.7 68,745 + +0.3 68,746 - +1.4 68,746 - -1.0 68,746 - -1.6 68,746 - +0.7 68,746 - -0.5 68,746 - -0.6 68,746 - +0.4 68,746 - +0.4 68,746 - -1.6 68,746 - +1.4 68,746 - -0.9 68,746 - -0.9 68,746 - +0.8 68,787 + -0.8 68,787 + +1.0 68,787 + -0.6 68,787 + +0.1 68,787 + -0.5 68,787 + +1.0 68,787 + +0.5 68,787 + +0.1 68,787 + +0.4 68,787 + -0.2 68,787 + -0.8 68,787 + +0.7 68,787 + +0.4 68,787 + +0.4 68,787 + +0.7 68,787 + -0.9 68,787 + -0.2 68,787 + +1.7 68,787 + +2.4 68,787 + -1.3 68,787 + +1.4 68,787 + +1.4 68,787 + -0.5 68,787 + -0.9 68,787 + -0.0 68,787 + -0.0 68,787 + -1.1 68,787 + +0.7 68,787 + -0.6 68,787 + -0.2 68,787 + -1.2 68,787 + +0.4 68,787 + -0.6 68,787 + +0.4 68,787 + -0.7 68,788 - -1.0 68,788 - +1.0 68,788 - -0.7 68,788 - +0.7 68,788 - -1.2 68,788 - +1.4 68,788 - +0.4 68,788 - -0.9 68,788 - -1.2 68,788 - +0.0 68,788 - +0.1 68,788 - +0.6 68,788 - -0.5 68,788 - +2.0 68,788 - +0.4 68,788 - -0.6 68,788 - +1.7 68,788 - +1.4 68,788 - +0.8 68,788 - -0.6 68,788 - -0.3 68,788 - -0.9 68,788 - -0.2 68,788 - +0.4 68,788 - +0.2 68,788 - -0.6 68,788 - -0.2 68,788 - -0.2 68,788 - +1.4 68,788 - -1.1 68,788 - +0.6 68,788 - -0.0 68,788 - +0.4 68,788 - +0.2 68,788 - +1.4 68,788 - -0.6 68,788 - -0.6 68,853 + -1.4 68,898 + -0.5 68,898 + +0.6 68,899 - +0.4 68,899 - +2.0 68,993 + LRK53_RS00295 0.35 +1.4 68,993 + LRK53_RS00295 0.35 -0.2 68,993 + LRK53_RS00295 0.35 -1.2 68,994 - LRK53_RS00295 0.36 -1.6 68,994 - LRK53_RS00295 0.36 -1.5 68,994 - LRK53_RS00295 0.36 -0.6 68,994 - LRK53_RS00295 0.36 +0.8 69,403 - LRK53_RS00300 0.26 -0.6 69,417 + LRK53_RS00300 0.28 +1.4 69,418 - LRK53_RS00300 0.28 +1.4 69,817 - LRK53_RS00300 0.78 +2.4 70,055 + -0.8 70,055 + +0.4 70,056 - -1.2 70,056 - -0.6 70,056 - +2.0 70,056 - +1.4 70,056 - -0.7
Or see this region's nucleotide sequence