Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14105

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
3,099,428	+				-1.9
3,099,428	+				-0.4
3,099,428	+				-0.4
3,099,428	+				+0.3
3,099,428	+				-1.9
3,099,428	+				+0.4
3,099,428	+				-0.6
3,099,428	+				-2.1
3,099,429	-				-0.7
3,099,429	-				-0.6
3,099,429	-				-0.0
3,099,429	-				-1.5
3,099,429	-				-1.2
3,099,429	-				-1.4
3,099,429	-				-1.4
3,099,435	+				-2.8
3,099,435	+				-2.3
3,099,435	+				-2.0
3,099,435	+				-1.6
3,099,435	+				-0.4
3,099,435	+				-1.6
3,099,435	+				-1.5
3,099,435	+				+2.0
3,099,435	+				+0.4
3,099,435	+				-1.4
3,099,435	+				-1.6
3,099,435	+				-1.7
3,099,435	+				-1.8
3,099,435	+				-2.2
3,099,435	+				-1.7
3,099,435	+				-1.7
3,099,435	+				-0.6
3,099,435	+				-2.0
3,099,435	+				-1.9
3,099,435	+				-2.0
3,099,435	+				-1.7
3,099,435	+				-0.9
3,099,435	+				-2.0
3,099,435	+				-1.6
3,099,435	+				-1.5
3,099,436	-				-0.4
3,099,436	-				-1.5
3,099,436	-				-1.1
3,099,436	-				-1.4
3,099,436	-				-1.5
3,099,436	-				-0.1
3,099,436	-				-0.6
3,099,436	-				-2.4
3,099,436	-				-1.5
3,099,436	-				-1.3
3,099,436	-				-0.8
3,099,436	-				-1.2
3,099,436	-				-0.0
3,099,436	-				-1.0
3,099,436	-				+0.2
3,099,436	-				-1.0
3,099,436	-				-0.4
3,099,437	+				-2.4
3,099,439	+				-1.6
3,099,439	+				-2.1
3,099,439	+				-1.0
3,099,439	+				-1.9
3,099,439	+				-2.2
3,099,439	+				-1.7
3,099,439	+				-0.9
3,099,439	+				-1.6
3,099,439	+				+0.5
3,099,439	+				-0.7
3,099,439	+				-1.8
3,099,439	+				-1.4
3,099,439	+				-2.4
3,099,439	+				-1.6
3,099,439	+				-2.7
3,099,439	+				+0.6
3,099,439	+				-2.1
3,099,439	+				-1.3
3,099,439	+				-3.0
3,099,439	+				-0.4
3,099,439	+				-1.6
3,099,439	+				-0.6
3,099,439	+				-0.4
3,099,439	+				-1.4
3,099,439	+				-1.1
3,099,439	+				-1.6
3,099,439	+				-2.2
3,099,439	+				-1.9
3,099,439	+				-1.8
3,099,439	+				-1.1
3,099,439	+				-1.5
3,099,439	+				-1.6
3,099,439	+				+0.4
3,099,439	+				-0.0
3,099,439	+				-0.8
3,099,439	+				-1.9
3,099,439	+				-1.3
3,099,439	+				-1.4
3,099,439	+				-1.2
3,099,439	+				-1.6
3,099,439	+				-1.9
3,099,439	+				-1.3
3,099,439	+				-2.2
3,099,439	+				-2.3
3,099,439	+				-2.0
3,099,439	+				-0.6
3,099,439	+				-2.8
3,099,439	+				-2.7
3,099,439	+				-1.9
3,099,439	+				-1.0
3,099,439	+				-1.9
3,099,439	+				-2.0
3,099,439	+				-0.6
3,099,439	+				-2.3
3,099,439	+				-1.9
3,099,439	+				-0.6
3,099,439	+				-1.6
3,099,439	+				-1.3
3,099,439	+				-1.7
3,099,439	+				-2.4
3,099,439	+				-0.3
3,099,439	+				-1.4
3,099,439	+				-1.4
3,099,439	+				-2.3
3,099,439	+				-1.9
3,099,439	+				-1.9
3,099,439	+				-2.0
3,099,439	+				+1.0
3,099,439	+				-2.0
3,099,439	+				-1.3
3,099,440	-				-1.3
3,099,440	-				-1.2
3,099,440	-				-0.6
3,099,440	-				-0.0
3,099,440	-				-1.1
3,099,440	-				-1.6
3,099,440	-				-1.3
3,099,440	-				-3.4
3,099,440	-				-0.6
3,099,440	-				-1.4
3,099,440	-				-1.4
3,099,440	-				-1.1
3,099,440	-				-2.8
3,099,440	-				-2.3
3,099,440	-				-1.4
3,099,440	-				-1.4
3,099,440	-				-1.1
3,099,440	-				-1.3
3,099,440	-				-1.4
3,099,440	-				-0.8
3,099,440	-				-0.7
3,099,440	-				-1.3
3,099,440	-				-1.1
3,099,440	-				-1.6
3,099,440	-				-1.5
3,099,440	-				-1.4
3,099,440	-				-0.9
3,099,440	-				+0.5
3,099,440	-				-1.3
3,099,440	-				-0.5
3,099,440	-				+2.0
3,099,440	-				-2.5
3,099,440	-				-1.0
3,099,440	-				-1.8
3,099,440	-				-2.0
3,099,440	-				-0.2
3,099,440	-				-1.8
3,099,440	-				-1.6
3,099,440	-				-0.8
3,099,440	-				+0.5
3,099,440	-				-1.4
3,099,440	-				-1.9
3,099,440	-				-0.3
3,099,440	-				-1.1
3,099,440	-				-1.5
3,099,440	-				-2.0
3,099,440	-				-1.8
3,099,440	-				-1.4
3,099,440	-				-2.1
3,099,440	-				-1.5
3,099,440	-				-0.9
3,099,440	-				-1.9
3,099,440	-				+1.0
3,099,440	-				-1.5
3,099,440	-				-1.0
3,099,440	-				-1.5
3,099,440	-				-1.4
3,099,440	-				-3.1
3,099,440	-				-1.9
3,099,440	-				-0.6
3,099,440	-				-1.4
3,099,440	-				-1.7
3,099,440	-				-1.5
3,099,440	-				-1.2
3,099,440	-				-0.7
3,099,440	-				-0.7
3,099,440	-				-1.1
3,099,440	-				-0.7
3,099,440	-				-1.6
3,099,440	-				-0.6
3,099,440	-				-3.0
3,099,440	-				+0.8
3,099,440	-				-1.2
3,099,440	-				-1.3
3,099,440	-				-2.4
3,099,444	+				-1.7
3,099,444	+				-1.5
3,099,444	+				-0.0
3,099,444	+				-2.3
3,099,444	+				-1.2
3,099,444	+				-2.0
3,099,444	+				-1.7
3,099,444	+				-2.2
3,099,444	+				-1.6
3,099,444	+				-2.3
3,099,444	+				-1.9
3,099,444	+				-1.6
3,099,444	+				-2.1
3,099,444	+				-2.0
3,099,444	+				-1.8
3,099,444	+				-1.4
3,099,444	+				-1.6
3,099,445	-				-3.4
3,099,445	-				-0.7
3,099,445	-				-1.0
3,099,445	-				-1.9
3,099,445	-				-1.0
3,099,445	-				-2.0
3,099,445	-				+1.3
3,099,445	-				-1.4
3,099,445	-				-1.5
3,099,445	-				+0.5
3,099,445	-				-1.0
3,099,445	-				-1.9
3,099,445	-				-0.7
3,099,491	+				-2.1
3,099,492	-				-1.4
3,099,534	+				-2.5
3,099,534	+				-1.8
3,099,534	+				-0.4
3,099,534	+				-1.3
3,099,534	+				+0.2
3,099,534	+				-1.6
3,099,534	+				+1.3
3,099,534	+				-1.4
3,099,534	+				-1.6
3,099,534	+				-2.5
3,099,534	+				-1.2
3,099,534	+				-2.3
3,099,534	+				-1.3
3,099,534	+				-1.6
3,099,534	+				+1.0
3,099,534	+				-0.3
3,099,534	+				-1.6
3,099,534	+				-0.7
3,099,534	+				-2.5
3,099,534	+				-2.1
3,099,534	+				-1.6
3,099,534	+				-0.8
3,099,534	+				-1.3
3,099,534	+				+1.5
3,099,534	+				-1.6
3,099,534	+				-0.3
3,099,534	+				-1.7
3,099,534	+				-2.6
3,099,535	-				-0.4
3,099,535	-				-0.2
3,099,535	-				-0.6
3,099,535	-				-0.8
3,099,535	-				-1.4
3,099,535	-				-1.2
3,099,535	-				-1.0
3,099,535	-				-0.3
3,099,535	-				-0.7
3,099,535	-				-1.7
3,099,535	-				-1.4
3,099,535	-				-0.0
3,099,535	-				-1.9
3,099,535	-				+1.0
3,099,535	-				-0.5
3,099,535	-				-2.7
3,099,535	-				-1.7
3,099,535	-				-1.0
3,099,535	-				-1.5
3,099,535	-				-1.2
3,099,535	-				-0.0
3,099,535	-				-0.9
3,099,535	-				-1.0
3,099,535	-				-1.4
3,099,535	-				-1.6
3,099,535	-				-0.5
3,099,535	-				-0.6
3,099,769	+		LRK53_RS14100	0.22	-0.6
3,099,769	+		LRK53_RS14100	0.22	-0.0
3,099,770	-		LRK53_RS14100	0.22	-0.6
3,099,970	+		LRK53_RS14100	0.53	-2.1
3,099,971	-		LRK53_RS14100	0.53	-1.4
3,100,116	+		LRK53_RS14100	0.76	+0.4
3,100,117	-		LRK53_RS14100	0.76	+1.0
3,100,117	-		LRK53_RS14100	0.76	-1.9
3,100,117	-		LRK53_RS14100	0.76	-1.4
3,100,117	-		LRK53_RS14100	0.76	-1.9
3,100,117	-		LRK53_RS14100	0.76	-3.0
3,100,377	+				-0.0
3,100,377	+				-1.0
3,100,377	+				-1.0
3,100,377	+				-1.6
3,100,377	+				+1.0
3,100,378	-				-0.9
3,100,378	-				-0.0
3,101,139	+		LRK53_RS14105	0.62	-0.0
3,101,139	+		LRK53_RS14105	0.62	-1.4
3,101,139	+		LRK53_RS14105	0.62	+0.4
3,101,139	+		LRK53_RS14105	0.62	-2.0
3,101,139	+		LRK53_RS14105	0.62	-2.0
3,101,139	+		LRK53_RS14105	0.62	-2.0
3,101,139	+		LRK53_RS14105	0.62	-2.5
3,101,139	+		LRK53_RS14105	0.62	-2.4
3,101,139	+		LRK53_RS14105	0.62	-0.6
3,101,139	+		LRK53_RS14105	0.62	-4.3
3,101,139	+		LRK53_RS14105	0.62	-0.0
3,101,140	-		LRK53_RS14105	0.62	-1.5
3,101,140	-		LRK53_RS14105	0.62	-1.6
3,101,140	-		LRK53_RS14105	0.62	-1.4
3,101,140	-		LRK53_RS14105	0.62	-2.5
3,101,140	-		LRK53_RS14105	0.62	-1.4
3,101,140	-		LRK53_RS14105	0.62	-2.2
3,101,181	+		LRK53_RS14105	0.66	-1.6
3,101,182	-		LRK53_RS14105	0.66	-1.0
3,101,323	-		LRK53_RS14105	0.77	-0.6
3,101,323	-		LRK53_RS14105	0.77	-0.0
3,101,421	+		LRK53_RS14105	0.85	-2.3
3,101,421	+		LRK53_RS14105	0.85	-1.9
3,101,421	+		LRK53_RS14105	0.85	-0.6
3,101,421	+		LRK53_RS14105	0.85	-3.2
3,101,421	+		LRK53_RS14105	0.85	+1.0
3,101,421	+		LRK53_RS14105	0.85	-2.4
3,101,421	+		LRK53_RS14105	0.85	+1.0
3,101,421	+		LRK53_RS14105	0.85	-1.0
3,101,421	+		LRK53_RS14105	0.85	-0.6
3,101,421	+		LRK53_RS14105	0.85	-1.4
3,101,421	+		LRK53_RS14105	0.85	-1.4
3,101,421	+		LRK53_RS14105	0.85	-1.2
3,101,421	+		LRK53_RS14105	0.85	-0.6
3,101,421	+		LRK53_RS14105	0.85	-3.1
3,101,422	-		LRK53_RS14105	0.85	-3.2
3,101,422	-		LRK53_RS14105	0.85	-0.6
3,101,422	-		LRK53_RS14105	0.85	-0.9
3,101,422	-		LRK53_RS14105	0.85	-1.6
3,101,422	-		LRK53_RS14105	0.85	-1.4
3,101,422	-		LRK53_RS14105	0.85	-1.7
3,101,442	+		LRK53_RS14105	0.87	-0.8
3,101,442	+		LRK53_RS14105	0.87	-2.4
3,101,442	+		LRK53_RS14105	0.87	-4.2
3,101,442	+		LRK53_RS14105	0.87	+1.0
3,101,442	+		LRK53_RS14105	0.87	-1.7
3,101,442	+		LRK53_RS14105	0.87	-3.5
3,101,443	-		LRK53_RS14105	0.87	+1.0
3,101,443	-		LRK53_RS14105	0.87	+0.4
3,101,443	-		LRK53_RS14105	0.87	-3.0
3,101,443	-		LRK53_RS14105	0.87	-1.6
3,101,541	+				-0.0
3,101,541	+				-0.6
3,101,541	+				+1.0
3,101,541	+				-2.9
3,101,541	+				-1.9
3,101,541	+				-0.6
3,101,541	+				+1.0
3,101,541	+				-0.6
3,101,541	+				-0.0
3,101,541	+				+1.0
3,101,542	-				-0.6
3,101,542	-				+1.0
3,101,542	-				-1.5
3,101,673	+				+0.5
3,101,673	+				-0.8
3,101,673	+				-0.0
3,101,684	+				-0.4
3,101,684	+				-0.0
3,101,684	+				-0.0
3,101,684	+				-0.6
3,101,685	-				+0.4
3,101,705	+				-0.4
3,101,705	+				-0.0
3,101,705	+				-1.6
3,101,705	+				+0.1
3,101,705	+				+0.3
3,101,705	+				-0.4
3,101,705	+				-0.1
3,101,705	+				-0.8
3,101,705	+				-1.2
3,101,705	+				-1.2
3,101,705	+				+0.2
3,101,705	+				-1.4
3,101,705	+				-0.4
3,101,705	+				+0.7
3,101,705	+				-0.9
3,101,705	+				+1.0
3,101,705	+				-0.6
3,101,705	+				-0.0
3,101,705	+				+0.4
3,101,705	+				-0.9
3,101,705	+				-0.6
3,101,705	+				+2.0
3,101,705	+				-1.4
3,101,705	+				-0.3
3,101,705	+				-0.3
3,101,705	+				-1.5
3,101,705	+				-1.0
3,101,706	-				-1.0
3,101,706	-				-1.0
3,101,706	-				+1.5
3,101,706	-				+2.0
3,101,706	-				+1.0
3,101,706	-				-0.0
3,101,706	-				-0.6
3,101,706	-				+1.0
3,101,901	-		LRK53_RS14110	0.17	-0.6
3,101,990	+		LRK53_RS14110	0.32	+3.0
3,102,041	+		LRK53_RS14110	0.40	-0.0
3,102,203	+		LRK53_RS14110	0.66	+1.0
3,102,203	+		LRK53_RS14110	0.66	-0.6
3,102,204	-		LRK53_RS14110	0.66	-0.0
3,102,284	+		LRK53_RS14110	0.79	-1.6