Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK53_RS06150 and LRK53_RS06155 are separated by 62 nucleotides LRK53_RS06155 and LRK53_RS06160 overlap by 4 nucleotides LRK53_RS06160 and LRK53_RS06165 are separated by 106 nucleotides
LRK53_RS06150: LRK53_RS06150 - PEP-CTERM sorting domain-containing protein, at 1,412,742 to 1,413,581
_RS06150
LRK53_RS06155: LRK53_RS06155 - DUF2069 domain-containing protein, at 1,413,644 to 1,414,015
_RS06155
LRK53_RS06160: LRK53_RS06160 - NAD(P)H:quinone oxidoreductase, at 1,414,012 to 1,414,614
_RS06160
LRK53_RS06165: LRK53_RS06165 - YihY family inner membrane protein, at 1,414,721 to 1,415,998
_RS06165
Position (kb) 1413
1414
1415 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1412.723 kb on + strand at 1412.728 kb on - strand at 1412.754 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.755 kb on + strand at 1412.756 kb on - strand at 1412.756 kb on - strand at 1412.756 kb on - strand at 1412.756 kb on - strand at 1412.876 kb on + strand, within LRK53_RS06150 at 1412.876 kb on + strand, within LRK53_RS06150 at 1412.876 kb on + strand, within LRK53_RS06150 at 1412.876 kb on + strand, within LRK53_RS06150 at 1412.876 kb on + strand, within LRK53_RS06150 at 1412.877 kb on - strand, within LRK53_RS06150 at 1412.905 kb on - strand, within LRK53_RS06150 at 1412.996 kb on + strand, within LRK53_RS06150 at 1412.996 kb on + strand, within LRK53_RS06150 at 1412.997 kb on - strand, within LRK53_RS06150 at 1412.997 kb on - strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.042 kb on + strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.043 kb on - strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.054 kb on + strand, within LRK53_RS06150 at 1413.055 kb on - strand, within LRK53_RS06150 at 1413.055 kb on - strand, within LRK53_RS06150 at 1413.055 kb on - strand, within LRK53_RS06150 at 1413.138 kb on + strand, within LRK53_RS06150 at 1413.138 kb on + strand, within LRK53_RS06150 at 1413.138 kb on + strand, within LRK53_RS06150 at 1413.138 kb on + strand, within LRK53_RS06150 at 1413.139 kb on - strand, within LRK53_RS06150 at 1413.139 kb on - strand, within LRK53_RS06150 at 1413.139 kb on - strand, within LRK53_RS06150 at 1413.139 kb on - strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.174 kb on + strand, within LRK53_RS06150 at 1413.175 kb on - strand, within LRK53_RS06150 at 1413.175 kb on - strand, within LRK53_RS06150 at 1413.175 kb on - strand, within LRK53_RS06150 at 1413.175 kb on - strand, within LRK53_RS06150 at 1413.175 kb on - strand, within LRK53_RS06150 at 1413.332 kb on + strand, within LRK53_RS06150 at 1413.332 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.335 kb on + strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.336 kb on - strand, within LRK53_RS06150 at 1413.357 kb on + strand, within LRK53_RS06150 at 1413.357 kb on + strand, within LRK53_RS06150 at 1413.358 kb on - strand, within LRK53_RS06150 at 1413.358 kb on - strand, within LRK53_RS06150 at 1413.358 kb on - strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.402 kb on + strand, within LRK53_RS06150 at 1413.403 kb on - strand, within LRK53_RS06150 at 1413.403 kb on - strand, within LRK53_RS06150 at 1413.403 kb on - strand, within LRK53_RS06150 at 1413.403 kb on - strand, within LRK53_RS06150 at 1413.403 kb on - strand, within LRK53_RS06150 at 1413.458 kb on + strand, within LRK53_RS06150 at 1413.459 kb on - strand, within LRK53_RS06150 at 1413.459 kb on - strand, within LRK53_RS06150 at 1413.459 kb on - strand, within LRK53_RS06150 at 1413.514 kb on + strand at 1413.514 kb on + strand at 1413.514 kb on + strand at 1413.515 kb on - strand at 1413.548 kb on + strand at 1413.548 kb on + strand at 1413.549 kb on - strand at 1413.549 kb on - strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.616 kb on + strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.617 kb on - strand at 1413.730 kb on - strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.792 kb on + strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1413.793 kb on - strand, within LRK53_RS06155 at 1414.181 kb on + strand, within LRK53_RS06160 at 1414.181 kb on + strand, within LRK53_RS06160 at 1414.182 kb on - strand, within LRK53_RS06160 at 1414.586 kb on + strand at 1414.586 kb on + strand at 1414.587 kb on - strand at 1414.587 kb on - strand at 1414.587 kb on - strand at 1414.587 kb on - strand at 1414.587 kb on - strand at 1414.589 kb on + strand at 1414.589 kb on + strand at 1414.589 kb on + strand at 1414.589 kb on + strand at 1414.589 kb on + strand at 1414.658 kb on + strand at 1414.659 kb on - strand at 1414.659 kb on - strand at 1414.659 kb on - strand at 1414.663 kb on + strand at 1414.823 kb on + strand at 1414.823 kb on + strand at 1414.824 kb on - strand at 1414.824 kb on - strand at 1414.824 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM remove 1,412,723 + -1.0 1,412,728 - -1.7 1,412,754 + -0.0 1,412,755 + +0.5 1,412,755 + +2.3 1,412,755 + +3.0 1,412,755 + +2.0 1,412,755 + -1.6 1,412,755 + -1.9 1,412,755 + -0.6 1,412,756 - -1.9 1,412,756 - +2.3 1,412,756 - -0.3 1,412,756 - +0.4 1,412,876 + LRK53_RS06150 0.16 -0.0 1,412,876 + LRK53_RS06150 0.16 -2.2 1,412,876 + LRK53_RS06150 0.16 +1.0 1,412,876 + LRK53_RS06150 0.16 -0.6 1,412,876 + LRK53_RS06150 0.16 -0.0 1,412,877 - LRK53_RS06150 0.16 -0.9 1,412,905 - LRK53_RS06150 0.19 +0.0 1,412,996 + LRK53_RS06150 0.30 +0.6 1,412,996 + LRK53_RS06150 0.30 -0.0 1,412,997 - LRK53_RS06150 0.30 +1.0 1,412,997 - LRK53_RS06150 0.30 -0.2 1,413,042 + LRK53_RS06150 0.36 -0.7 1,413,042 + LRK53_RS06150 0.36 -0.0 1,413,042 + LRK53_RS06150 0.36 +0.5 1,413,042 + LRK53_RS06150 0.36 -0.2 1,413,042 + LRK53_RS06150 0.36 -2.0 1,413,042 + LRK53_RS06150 0.36 +1.5 1,413,042 + LRK53_RS06150 0.36 -1.0 1,413,042 + LRK53_RS06150 0.36 -0.4 1,413,042 + LRK53_RS06150 0.36 -1.0 1,413,043 - LRK53_RS06150 0.36 +0.1 1,413,043 - LRK53_RS06150 0.36 -0.6 1,413,043 - LRK53_RS06150 0.36 -0.0 1,413,043 - LRK53_RS06150 0.36 +1.0 1,413,043 - LRK53_RS06150 0.36 +0.4 1,413,043 - LRK53_RS06150 0.36 -0.7 1,413,043 - LRK53_RS06150 0.36 -1.0 1,413,043 - LRK53_RS06150 0.36 +1.5 1,413,043 - LRK53_RS06150 0.36 +0.1 1,413,043 - LRK53_RS06150 0.36 +0.4 1,413,043 - LRK53_RS06150 0.36 +1.0 1,413,054 + LRK53_RS06150 0.37 -0.6 1,413,054 + LRK53_RS06150 0.37 +2.0 1,413,054 + LRK53_RS06150 0.37 -1.9 1,413,054 + LRK53_RS06150 0.37 +1.0 1,413,054 + LRK53_RS06150 0.37 -2.4 1,413,054 + LRK53_RS06150 0.37 -0.6 1,413,054 + LRK53_RS06150 0.37 -0.6 1,413,054 + LRK53_RS06150 0.37 -1.6 1,413,055 - LRK53_RS06150 0.37 -0.4 1,413,055 - LRK53_RS06150 0.37 -0.5 1,413,055 - LRK53_RS06150 0.37 +1.0 1,413,138 + LRK53_RS06150 0.47 -1.0 1,413,138 + LRK53_RS06150 0.47 +0.8 1,413,138 + LRK53_RS06150 0.47 -1.4 1,413,138 + LRK53_RS06150 0.47 -0.3 1,413,139 - LRK53_RS06150 0.47 +1.0 1,413,139 - LRK53_RS06150 0.47 -1.0 1,413,139 - LRK53_RS06150 0.47 -0.0 1,413,139 - LRK53_RS06150 0.47 -1.4 1,413,174 + LRK53_RS06150 0.51 +1.0 1,413,174 + LRK53_RS06150 0.51 -1.2 1,413,174 + LRK53_RS06150 0.51 -1.0 1,413,174 + LRK53_RS06150 0.51 +2.0 1,413,174 + LRK53_RS06150 0.51 -1.0 1,413,174 + LRK53_RS06150 0.51 -0.6 1,413,174 + LRK53_RS06150 0.51 -1.3 1,413,174 + LRK53_RS06150 0.51 +3.3 1,413,175 - LRK53_RS06150 0.52 +2.0 1,413,175 - LRK53_RS06150 0.52 -2.0 1,413,175 - LRK53_RS06150 0.52 -0.7 1,413,175 - LRK53_RS06150 0.52 -0.4 1,413,175 - LRK53_RS06150 0.52 +2.0 1,413,332 + LRK53_RS06150 0.70 +0.6 1,413,332 + LRK53_RS06150 0.70 -0.0 1,413,335 + LRK53_RS06150 0.71 -1.0 1,413,335 + LRK53_RS06150 0.71 -0.6 1,413,335 + LRK53_RS06150 0.71 +0.2 1,413,335 + LRK53_RS06150 0.71 +0.4 1,413,335 + LRK53_RS06150 0.71 -0.0 1,413,335 + LRK53_RS06150 0.71 -1.9 1,413,335 + LRK53_RS06150 0.71 +1.5 1,413,335 + LRK53_RS06150 0.71 -0.9 1,413,335 + LRK53_RS06150 0.71 -0.6 1,413,335 + LRK53_RS06150 0.71 -0.4 1,413,335 + LRK53_RS06150 0.71 +0.4 1,413,335 + LRK53_RS06150 0.71 -1.3 1,413,335 + LRK53_RS06150 0.71 +1.0 1,413,335 + LRK53_RS06150 0.71 +0.0 1,413,335 + LRK53_RS06150 0.71 +1.5 1,413,335 + LRK53_RS06150 0.71 -1.6 1,413,335 + LRK53_RS06150 0.71 +1.0 1,413,336 - LRK53_RS06150 0.71 -0.6 1,413,336 - LRK53_RS06150 0.71 -1.4 1,413,336 - LRK53_RS06150 0.71 -0.6 1,413,336 - LRK53_RS06150 0.71 +0.2 1,413,336 - LRK53_RS06150 0.71 +0.4 1,413,336 - LRK53_RS06150 0.71 -0.0 1,413,336 - LRK53_RS06150 0.71 -1.6 1,413,336 - LRK53_RS06150 0.71 -1.2 1,413,336 - LRK53_RS06150 0.71 -1.4 1,413,357 + LRK53_RS06150 0.73 -1.1 1,413,357 + LRK53_RS06150 0.73 -0.5 1,413,358 - LRK53_RS06150 0.73 -0.0 1,413,358 - LRK53_RS06150 0.73 -0.6 1,413,358 - LRK53_RS06150 0.73 -1.2 1,413,402 + LRK53_RS06150 0.79 +0.6 1,413,402 + LRK53_RS06150 0.79 +2.0 1,413,402 + LRK53_RS06150 0.79 -0.0 1,413,402 + LRK53_RS06150 0.79 +1.0 1,413,402 + LRK53_RS06150 0.79 -0.8 1,413,402 + LRK53_RS06150 0.79 +0.6 1,413,402 + LRK53_RS06150 0.79 +2.0 1,413,403 - LRK53_RS06150 0.79 -1.0 1,413,403 - LRK53_RS06150 0.79 -1.9 1,413,403 - LRK53_RS06150 0.79 -0.1 1,413,403 - LRK53_RS06150 0.79 +0.4 1,413,403 - LRK53_RS06150 0.79 -0.4 1,413,458 + LRK53_RS06150 0.85 -0.0 1,413,459 - LRK53_RS06150 0.85 +0.5 1,413,459 - LRK53_RS06150 0.85 -1.6 1,413,459 - LRK53_RS06150 0.85 +0.4 1,413,514 + -1.4 1,413,514 + +0.5 1,413,514 + +0.5 1,413,515 - -0.9 1,413,548 + -0.6 1,413,548 + -0.6 1,413,549 - -1.0 1,413,549 - +0.5 1,413,616 + -0.6 1,413,616 + +1.0 1,413,616 + +0.2 1,413,616 + -0.2 1,413,616 + +1.0 1,413,616 + +1.7 1,413,616 + -1.7 1,413,616 + +1.0 1,413,616 + -0.0 1,413,616 + -1.2 1,413,616 + +1.0 1,413,616 + -1.5 1,413,616 + +2.0 1,413,616 + +1.0 1,413,616 + +1.0 1,413,617 - +1.0 1,413,617 - -1.4 1,413,617 - +1.0 1,413,617 - -0.9 1,413,617 - +0.3 1,413,617 - -0.0 1,413,617 - -1.6 1,413,617 - +1.0 1,413,730 - LRK53_RS06155 0.23 +0.5 1,413,792 + LRK53_RS06155 0.40 +2.0 1,413,792 + LRK53_RS06155 0.40 +0.0 1,413,792 + LRK53_RS06155 0.40 +0.2 1,413,792 + LRK53_RS06155 0.40 -0.0 1,413,792 + LRK53_RS06155 0.40 -2.4 1,413,792 + LRK53_RS06155 0.40 +0.5 1,413,793 - LRK53_RS06155 0.40 -0.3 1,413,793 - LRK53_RS06155 0.40 -1.2 1,413,793 - LRK53_RS06155 0.40 +1.0 1,413,793 - LRK53_RS06155 0.40 -1.0 1,413,793 - LRK53_RS06155 0.40 -0.3 1,413,793 - LRK53_RS06155 0.40 -2.2 1,413,793 - LRK53_RS06155 0.40 +1.0 1,413,793 - LRK53_RS06155 0.40 -0.3 1,413,793 - LRK53_RS06155 0.40 -0.0 1,413,793 - LRK53_RS06155 0.40 -0.6 1,413,793 - LRK53_RS06155 0.40 +2.0 1,413,793 - LRK53_RS06155 0.40 +2.0 1,413,793 - LRK53_RS06155 0.40 +1.0 1,413,793 - LRK53_RS06155 0.40 -0.9 1,414,181 + LRK53_RS06160 0.28 -1.0 1,414,181 + LRK53_RS06160 0.28 -0.0 1,414,182 - LRK53_RS06160 0.28 -0.0 1,414,586 + -0.4 1,414,586 + +1.0 1,414,587 - -0.0 1,414,587 - -0.4 1,414,587 - -0.3 1,414,587 - +1.0 1,414,587 - -1.4 1,414,589 + -0.8 1,414,589 + -0.0 1,414,589 + -0.5 1,414,589 + +0.4 1,414,589 + -1.6 1,414,658 + -0.0 1,414,659 - -0.0 1,414,659 - +2.0 1,414,659 - -0.6 1,414,663 + +0.7 1,414,823 + -0.6 1,414,823 + -1.6 1,414,824 - +1.0 1,414,824 - +0.1 1,414,824 - -0.3
Or see this region's nucleotide sequence