Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04430

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
1,028,380	+		LRK53_RS04420	0.89	+0.2
1,028,381	-		LRK53_RS04420	0.89	+0.1
1,028,386	+		LRK53_RS04420	0.90	+0.1
1,028,386	+		LRK53_RS04420	0.90	+0.5
1,028,386	+		LRK53_RS04420	0.90	-0.0
1,028,387	-		LRK53_RS04420	0.90	-1.1
1,028,387	-		LRK53_RS04420	0.90	-0.0
1,028,387	-		LRK53_RS04420	0.90	-0.7
1,028,387	-		LRK53_RS04420	0.90	-0.0
1,028,387	-		LRK53_RS04420	0.90	-1.4
1,028,387	-		LRK53_RS04420	0.90	-0.6
1,028,490	+				+0.3
1,028,490	+				-1.2
1,028,490	+				-1.9
1,028,490	+				-0.4
1,028,490	+				+1.0
1,028,490	+				+0.4
1,028,491	-				-0.0
1,028,491	-				+1.0
1,028,491	-				-0.3
1,028,491	-				-0.2
1,028,491	-				-1.0
1,028,491	-				-1.2
1,028,528	+				+0.8
1,028,528	+				-0.3
1,028,528	+				-0.4
1,028,642	+		LRK53_RS04425	0.16	-1.0
1,028,647	+		LRK53_RS04425	0.16	+1.0
1,028,647	+		LRK53_RS04425	0.16	+1.3
1,028,647	+		LRK53_RS04425	0.16	+0.4
1,028,647	+		LRK53_RS04425	0.16	+0.1
1,028,647	+		LRK53_RS04425	0.16	-0.6
1,028,667	+		LRK53_RS04425	0.19	+2.5
1,028,667	+		LRK53_RS04425	0.19	+0.4
1,028,667	+		LRK53_RS04425	0.19	-1.0
1,028,677	+		LRK53_RS04425	0.20	-0.5
1,028,677	+		LRK53_RS04425	0.20	+2.0
1,028,707	+		LRK53_RS04425	0.23	-1.0
1,028,736	+		LRK53_RS04425	0.27	-0.4
1,028,736	+		LRK53_RS04425	0.27	+0.1
1,028,736	+		LRK53_RS04425	0.27	+0.2
1,028,753	+		LRK53_RS04425	0.29	-0.6
1,028,753	+		LRK53_RS04425	0.29	+0.1
1,028,753	+		LRK53_RS04425	0.29	-0.0
1,028,753	+		LRK53_RS04425	0.29	-1.4
1,028,760	+		LRK53_RS04425	0.29	-0.9
1,028,798	+		LRK53_RS04425	0.34	+0.5
1,028,798	+		LRK53_RS04425	0.34	-1.4
1,028,882	+		LRK53_RS04425	0.44	-0.0
1,028,882	+		LRK53_RS04425	0.44	-1.0
1,028,882	+		LRK53_RS04425	0.44	-0.0
1,028,882	+		LRK53_RS04425	0.44	+1.0
1,028,882	+		LRK53_RS04425	0.44	+0.6
1,028,883	-		LRK53_RS04425	0.44	+1.0
1,028,883	-		LRK53_RS04425	0.44	-0.0
1,028,905	+		LRK53_RS04425	0.46	-0.9
1,028,905	+		LRK53_RS04425	0.46	+1.0
1,028,933	+		LRK53_RS04425	0.50	+0.7
1,028,933	+		LRK53_RS04425	0.50	-0.5
1,028,933	+		LRK53_RS04425	0.50	-0.6
1,028,933	+		LRK53_RS04425	0.50	-1.7
1,028,933	+		LRK53_RS04425	0.50	+0.4
1,028,933	+		LRK53_RS04425	0.50	-0.6
1,028,934	-		LRK53_RS04425	0.50	+2.0
1,028,938	+		LRK53_RS04425	0.50	+1.0
1,028,938	+		LRK53_RS04425	0.50	-0.7
1,028,938	+		LRK53_RS04425	0.50	-0.6
1,028,938	+		LRK53_RS04425	0.50	-0.0
1,028,938	+		LRK53_RS04425	0.50	-0.5
1,028,940	+		LRK53_RS04425	0.51	-0.8
1,028,940	+		LRK53_RS04425	0.51	-0.4
1,028,940	+		LRK53_RS04425	0.51	-2.2
1,028,940	+		LRK53_RS04425	0.51	-0.8
1,028,940	+		LRK53_RS04425	0.51	-1.6
1,028,940	+		LRK53_RS04425	0.51	-1.0
1,028,940	+		LRK53_RS04425	0.51	-0.6
1,028,940	+		LRK53_RS04425	0.51	+0.4
1,028,940	+		LRK53_RS04425	0.51	-0.6
1,028,940	+		LRK53_RS04425	0.51	+0.7
1,028,974	+		LRK53_RS04425	0.55	-0.6
1,028,974	+		LRK53_RS04425	0.55	-0.0
1,028,974	+		LRK53_RS04425	0.55	-0.7
1,028,974	+		LRK53_RS04425	0.55	-0.6
1,028,974	+		LRK53_RS04425	0.55	-0.8
1,028,974	+		LRK53_RS04425	0.55	+2.0
1,029,014	+		LRK53_RS04425	0.59	-0.6
1,029,143	+		LRK53_RS04425	0.74	-1.0
1,029,143	+		LRK53_RS04425	0.74	+1.4
1,029,143	+		LRK53_RS04425	0.74	-0.0
1,029,144	-		LRK53_RS04425	0.74	-0.0
1,029,218	+		LRK53_RS04425	0.83	+2.0
1,029,218	+		LRK53_RS04425	0.83	-1.9
1,029,219	-		LRK53_RS04425	0.83	+0.3
1,029,221	+		LRK53_RS04425	0.83	+1.0
1,029,221	+		LRK53_RS04425	0.83	+3.3
1,029,229	+		LRK53_RS04425	0.84	-0.6
1,029,320	+				-0.2
1,029,380	+				+0.5
1,029,380	+				+0.0
1,029,380	+				-0.7
1,029,381	-				-0.6
1,029,381	-				-1.7
1,029,382	+				+1.0
1,029,382	+				+0.2
1,029,382	+				-0.1
1,029,382	+				+0.1
1,029,382	+				+1.3
1,029,382	+				+1.5
1,029,382	+				-2.2
1,029,382	+				-0.3
1,029,382	+				+0.5
1,029,382	+				-0.4
1,029,382	+				+0.6
1,029,382	+				-0.6
1,029,382	+				-0.4
1,029,382	+				-0.0
1,029,382	+				+1.0
1,029,383	-				-0.6
1,029,383	-				-0.9
1,029,383	-				-1.0
1,029,383	-				-0.2
1,029,383	-				-0.3
1,029,383	-				+1.0
1,029,383	-				-0.6
1,029,383	-				-1.0
1,029,383	-				-1.2
1,029,383	-				+1.0
1,029,383	-				-0.6
1,029,383	-				-1.6
1,029,383	-				+0.3
1,029,383	-				-1.6
1,029,383	-				+0.4
1,029,383	-				-0.6
1,029,383	-				-0.6
1,029,383	-				-1.0
1,029,437	+				-1.4
1,029,437	+				-0.0
1,029,437	+				+1.0
1,029,437	+				+1.3
1,029,437	+				+0.1
1,029,437	+				-0.8
1,029,438	-				-0.2
1,029,438	-				-1.4
1,029,438	-				+0.3
1,029,438	-				+0.2
1,029,438	-				-0.3
1,029,440	-				+0.4
1,029,440	-				-1.0
1,029,440	-				-0.6
1,029,526	+		LRK53_RS04430	0.16	+1.0
1,029,644	+		LRK53_RS04430	0.27	-0.4
1,029,645	-		LRK53_RS04430	0.27	-0.0
1,029,645	-		LRK53_RS04430	0.27	-0.2
1,029,651	+		LRK53_RS04430	0.28	+0.7
1,029,651	+		LRK53_RS04430	0.28	-0.6
1,029,651	+		LRK53_RS04430	0.28	+1.4
1,029,651	+		LRK53_RS04430	0.28	-0.5
1,029,651	+		LRK53_RS04430	0.28	+1.0
1,029,652	-		LRK53_RS04430	0.28	+0.1
1,029,652	-		LRK53_RS04430	0.28	-0.2
1,029,652	-		LRK53_RS04430	0.28	+1.7
1,029,652	-		LRK53_RS04430	0.28	+2.0
1,029,652	-		LRK53_RS04430	0.28	+0.4
1,029,652	-		LRK53_RS04430	0.28	-0.6
1,029,652	-		LRK53_RS04430	0.28	-0.9
1,029,657	+		LRK53_RS04430	0.28	+0.6
1,029,657	+		LRK53_RS04430	0.28	+0.4
1,029,657	+		LRK53_RS04430	0.28	+0.4
1,029,657	+		LRK53_RS04430	0.28	-0.5
1,029,658	-		LRK53_RS04430	0.29	-0.6
1,029,712	+		LRK53_RS04430	0.34	-0.3
1,029,713	-		LRK53_RS04430	0.34	-0.1
1,029,713	-		LRK53_RS04430	0.34	+0.2
1,029,747	+		LRK53_RS04430	0.37	+0.6
1,029,747	+		LRK53_RS04430	0.37	+0.7
1,029,748	-		LRK53_RS04430	0.37	+0.2
1,029,748	-		LRK53_RS04430	0.37	+1.0
1,029,748	-		LRK53_RS04430	0.37	+2.5
1,029,748	-		LRK53_RS04430	0.37	+0.4
1,029,748	-		LRK53_RS04430	0.37	+0.7
1,029,760	+		LRK53_RS04430	0.38	+0.3
1,029,760	+		LRK53_RS04430	0.38	+1.0
1,029,790	+		LRK53_RS04430	0.41	-0.3
1,029,790	+		LRK53_RS04430	0.41	+0.0
1,029,790	+		LRK53_RS04430	0.41	-1.2
1,029,790	+		LRK53_RS04430	0.41	-0.5
1,029,790	+		LRK53_RS04430	0.41	-0.2
1,029,790	+		LRK53_RS04430	0.41	-0.6
1,029,790	+		LRK53_RS04430	0.41	-0.6
1,029,791	-		LRK53_RS04430	0.41	-1.0
1,029,791	-		LRK53_RS04430	0.41	-0.6
1,029,791	-		LRK53_RS04430	0.41	-0.2
1,029,791	-		LRK53_RS04430	0.41	+1.2
1,029,791	-		LRK53_RS04430	0.41	+0.1
1,029,808	+		LRK53_RS04430	0.43	-0.0
1,029,808	+		LRK53_RS04430	0.43	+0.1
1,029,809	-		LRK53_RS04430	0.43	+1.3
1,029,825	+		LRK53_RS04430	0.45	+0.4
1,029,825	+		LRK53_RS04430	0.45	+1.8
1,029,826	-		LRK53_RS04430	0.45	-0.4
1,029,826	-		LRK53_RS04430	0.45	-1.0
1,029,885	+		LRK53_RS04430	0.50	-0.0
1,029,885	+		LRK53_RS04430	0.50	+0.5
1,029,886	-		LRK53_RS04430	0.50	-1.0
1,029,886	-		LRK53_RS04430	0.50	-0.4
1,029,963	-		LRK53_RS04430	0.58	+0.6
1,029,963	-		LRK53_RS04430	0.58	+1.4
1,030,002	+		LRK53_RS04430	0.61	+0.4
1,030,003	-		LRK53_RS04430	0.62	-0.9
1,030,003	-		LRK53_RS04430	0.62	-0.5
1,030,023	+		LRK53_RS04430	0.63	+0.7
1,030,023	+		LRK53_RS04430	0.63	-2.6
1,030,023	+		LRK53_RS04430	0.63	+1.0
1,030,023	+		LRK53_RS04430	0.63	-0.0
1,030,024	-		LRK53_RS04430	0.64	-0.9
1,030,169	+		LRK53_RS04430	0.77	+0.7
1,030,169	+		LRK53_RS04430	0.77	+0.5
1,030,169	+		LRK53_RS04430	0.77	-0.0
1,030,170	-		LRK53_RS04430	0.77	-0.9
1,030,170	-		LRK53_RS04430	0.77	-0.6
1,030,170	-		LRK53_RS04430	0.77	-0.1
1,030,170	-		LRK53_RS04430	0.77	+0.8
1,030,191	-		LRK53_RS04430	0.79	+0.5
1,030,227	+		LRK53_RS04430	0.83	+0.4
1,030,227	+		LRK53_RS04430	0.83	-0.4
1,030,227	+		LRK53_RS04430	0.83	+0.4
1,030,228	-		LRK53_RS04430	0.83	-0.9
1,030,228	-		LRK53_RS04430	0.83	-0.0
1,030,228	-		LRK53_RS04430	0.83	-0.0
1,030,240	+		LRK53_RS04430	0.84	-0.0
1,030,240	+		LRK53_RS04430	0.84	-0.8
1,030,240	+		LRK53_RS04430	0.84	-0.6
1,030,240	+		LRK53_RS04430	0.84	-0.8
1,030,241	-		LRK53_RS04430	0.84	+1.4
1,030,241	-		LRK53_RS04430	0.84	+1.0
1,030,261	+		LRK53_RS04430	0.86	-0.0
1,030,262	-		LRK53_RS04430	0.86	+1.0
1,030,262	-		LRK53_RS04430	0.86	-0.5
1,030,266	+		LRK53_RS04430	0.87	+0.2
1,030,266	+		LRK53_RS04430	0.87	-0.0
1,030,267	-		LRK53_RS04430	0.87	-0.3
1,030,267	-		LRK53_RS04430	0.87	-0.6
1,030,267	-		LRK53_RS04430	0.87	-0.2
1,030,267	-		LRK53_RS04430	0.87	-0.4
1,030,267	-		LRK53_RS04430	0.87	+0.2
1,030,267	-		LRK53_RS04430	0.87	+1.0
1,030,340	-				+1.0
1,030,340	-				+1.0
1,030,411	+				+1.1
1,030,411	+				+2.2
1,030,412	-				+0.7
1,030,412	-				+0.0
1,030,425	-				+1.0
1,030,437	+				+0.4
1,030,438	-				-0.6
1,030,438	-				-1.4
1,030,458	-				-0.1
1,030,474	+				-0.4
1,030,474	+				-0.6
1,030,474	+				+0.5
1,030,475	-				-0.0
1,030,529	+				+0.7
1,030,529	+				-1.0
1,030,529	+				-0.9
1,030,529	+				+1.4
1,030,529	+				-1.0
1,030,529	+				+0.5
1,030,529	+				+0.1
1,030,529	+				-0.4
1,030,529	+				-1.4
1,030,529	+				+0.4
1,030,529	+				-2.0
1,030,529	+				-0.6
1,030,529	+				-1.0
1,030,529	+				-0.0
1,030,529	+				-0.0
1,030,529	+				-0.6
1,030,529	+				+1.0
1,030,529	+				-0.8
1,030,529	+				-0.5
1,030,529	+				-0.0
1,030,529	+				-0.4
1,030,529	+				+0.2
1,030,529	+				+0.1
1,030,529	+				-0.1
1,030,529	+				+0.4
1,030,529	+				+0.1
1,030,529	+				+0.4
1,030,529	+				-0.0
1,030,529	+				-0.3
1,030,530	-				+2.0
1,030,530	-				-0.2
1,030,530	-				+0.4
1,030,530	-				-0.6
1,030,530	-				-0.6
1,030,530	-				-0.9
1,030,530	-				-2.0
1,030,530	-				-1.0
1,030,530	-				+0.4
1,030,530	-				-0.0
1,030,530	-				+0.4
1,030,530	-				-0.0
1,030,530	-				+0.4
1,030,530	-				+0.5
1,030,530	-				-2.0
1,030,530	-				+1.5
1,030,530	-				-0.9
1,030,530	-				-0.5
1,030,530	-				+0.2
1,030,530	-				-0.5
1,030,530	-				-0.6
1,030,530	-				+0.4
1,030,530	-				-1.7
1,030,530	-				-1.5
1,030,530	-				-0.0
1,030,530	-				+1.0
1,030,530	-				+1.0
1,030,530	-				-0.2
1,030,530	-				+0.2
1,030,581	+				+0.2
1,030,581	+				+0.0
1,030,581	+				+0.5
1,030,581	+				+1.5
1,030,581	+				+0.4
1,030,581	+				+1.2
1,030,582	-				-0.3
1,030,582	-				-1.4
1,030,724	-		LRK53_RS04435	0.18	-1.1
1,030,724	-		LRK53_RS04435	0.18	-0.2
1,030,724	-		LRK53_RS04435	0.18	+1.0
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,724	-		LRK53_RS04435	0.18	-0.3
1,030,724	-		LRK53_RS04435	0.18	-0.6
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,724	-		LRK53_RS04435	0.18	-0.0
1,030,724	-		LRK53_RS04435	0.18	-0.6
1,030,724	-		LRK53_RS04435	0.18	-0.0
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,724	-		LRK53_RS04435	0.18	-0.0
1,030,724	-		LRK53_RS04435	0.18	+0.4
1,030,724	-		LRK53_RS04435	0.18	+2.0
1,030,724	-		LRK53_RS04435	0.18	-0.7
1,030,724	-		LRK53_RS04435	0.18	+2.0
1,030,724	-		LRK53_RS04435	0.18	-0.6
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,724	-		LRK53_RS04435	0.18	-1.2
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,724	-		LRK53_RS04435	0.18	+0.1
1,030,724	-		LRK53_RS04435	0.18	-0.6
1,030,724	-		LRK53_RS04435	0.18	-0.0
1,030,724	-		LRK53_RS04435	0.18	-1.5
1,030,724	-		LRK53_RS04435	0.18	+0.1
1,030,724	-		LRK53_RS04435	0.18	-0.0
1,030,724	-		LRK53_RS04435	0.18	+0.6
1,030,724	-		LRK53_RS04435	0.18	-0.4
1,030,724	-		LRK53_RS04435	0.18	+2.0
1,030,724	-		LRK53_RS04435	0.18	-1.0
1,030,780	+		LRK53_RS04435	0.24	-0.7
1,030,780	+		LRK53_RS04435	0.24	+1.7
1,030,781	-		LRK53_RS04435	0.24	+1.0
1,030,781	-		LRK53_RS04435	0.24	-0.9
1,030,781	-		LRK53_RS04435	0.24	-1.0
1,030,861	+		LRK53_RS04435	0.33	-0.0
1,030,958	+		LRK53_RS04435	0.43	+1.5
1,030,959	-		LRK53_RS04435	0.43	+0.1
1,030,959	-		LRK53_RS04435	0.43	+1.0
1,031,107	+		LRK53_RS04435	0.59	+0.4
1,031,107	+		LRK53_RS04435	0.59	+0.4
1,031,108	-		LRK53_RS04435	0.59	-0.0
1,031,108	-		LRK53_RS04435	0.59	+0.1
1,031,108	-		LRK53_RS04435	0.59	+0.1
1,031,108	-		LRK53_RS04435	0.59	-0.7
1,031,108	-		LRK53_RS04435	0.59	+0.4
1,031,157	+		LRK53_RS04435	0.64	+1.0
1,031,157	+		LRK53_RS04435	0.64	-0.0
1,031,158	-		LRK53_RS04435	0.64	-1.2
1,031,158	-		LRK53_RS04435	0.64	+0.3
1,031,158	-		LRK53_RS04435	0.64	-0.3
1,031,158	-		LRK53_RS04435	0.64	-0.0
1,031,240	-		LRK53_RS04435	0.73	-1.0
1,031,240	-		LRK53_RS04435	0.73	+2.0