Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14270

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
3,128,231	-		LRK53_RS14265	0.57	+0.1
3,128,231	-		LRK53_RS14265	0.57	-1.9
3,128,254	+		LRK53_RS14265	0.58	+0.9
3,128,254	+		LRK53_RS14265	0.58	-2.1
3,128,255	-		LRK53_RS14265	0.58	-0.6
3,128,255	-		LRK53_RS14265	0.58	-1.0
3,128,255	-		LRK53_RS14265	0.58	-1.1
3,128,255	-		LRK53_RS14265	0.58	-1.9
3,128,255	-		LRK53_RS14265	0.58	-0.6
3,128,255	-		LRK53_RS14265	0.58	-0.1
3,128,255	-		LRK53_RS14265	0.58	-1.8
3,128,255	-		LRK53_RS14265	0.58	-1.0
3,128,258	+		LRK53_RS14265	0.58	+0.4
3,128,259	-		LRK53_RS14265	0.58	+0.7
3,128,259	-		LRK53_RS14265	0.58	+2.5
3,128,259	-		LRK53_RS14265	0.58	-0.6
3,128,259	-		LRK53_RS14265	0.58	+0.5
3,128,453	+		LRK53_RS14265	0.66	-0.1
3,128,453	+		LRK53_RS14265	0.66	-1.9
3,128,453	+		LRK53_RS14265	0.66	-1.4
3,128,454	-		LRK53_RS14265	0.67	-1.1
3,128,454	-		LRK53_RS14265	0.67	+0.1
3,128,495	+		LRK53_RS14265	0.68	+0.9
3,128,495	+		LRK53_RS14265	0.68	-1.4
3,128,495	+		LRK53_RS14265	0.68	+0.4
3,128,495	+		LRK53_RS14265	0.68	+0.9
3,128,495	+		LRK53_RS14265	0.68	+0.1
3,128,496	-		LRK53_RS14265	0.68	-0.1
3,128,496	-		LRK53_RS14265	0.68	-1.5
3,128,496	-		LRK53_RS14265	0.68	-0.1
3,128,496	-		LRK53_RS14265	0.68	-0.1
3,128,523	-		LRK53_RS14265	0.70	-0.6
3,128,581	+		LRK53_RS14265	0.72	-1.2
3,128,581	+		LRK53_RS14265	0.72	-0.9
3,128,581	+		LRK53_RS14265	0.72	-1.7
3,128,581	+		LRK53_RS14265	0.72	-0.9
3,128,582	-		LRK53_RS14265	0.72	-0.6
3,128,582	-		LRK53_RS14265	0.72	-0.3
3,128,596	+		LRK53_RS14265	0.73	-2.4
3,128,596	+		LRK53_RS14265	0.73	-1.0
3,128,596	+		LRK53_RS14265	0.73	-1.3
3,128,596	+		LRK53_RS14265	0.73	-0.4
3,128,596	+		LRK53_RS14265	0.73	+0.5
3,128,596	+		LRK53_RS14265	0.73	+0.2
3,128,596	+		LRK53_RS14265	0.73	+0.5
3,128,596	+		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	-0.9
3,128,597	-		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	+0.5
3,128,597	-		LRK53_RS14265	0.73	-1.3
3,128,597	-		LRK53_RS14265	0.73	+0.4
3,128,597	-		LRK53_RS14265	0.73	-0.5
3,128,597	-		LRK53_RS14265	0.73	+0.9
3,128,597	-		LRK53_RS14265	0.73	-1.0
3,128,597	-		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	-1.1
3,128,597	-		LRK53_RS14265	0.73	-0.9
3,128,597	-		LRK53_RS14265	0.73	+0.9
3,128,597	-		LRK53_RS14265	0.73	-1.8
3,128,597	-		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	+0.9
3,128,597	-		LRK53_RS14265	0.73	+1.9
3,128,597	-		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	-2.1
3,128,597	-		LRK53_RS14265	0.73	+0.9
3,128,597	-		LRK53_RS14265	0.73	+0.4
3,128,597	-		LRK53_RS14265	0.73	-0.1
3,128,597	-		LRK53_RS14265	0.73	-0.5
3,128,597	-		LRK53_RS14265	0.73	+0.4
3,128,604	+		LRK53_RS14265	0.73	-0.1
3,128,604	+		LRK53_RS14265	0.73	-0.6
3,128,604	+		LRK53_RS14265	0.73	+0.4
3,128,604	+		LRK53_RS14265	0.73	+0.7
3,128,604	+		LRK53_RS14265	0.73	-0.1
3,128,604	+		LRK53_RS14265	0.73	-1.6
3,128,604	+		LRK53_RS14265	0.73	-0.9
3,128,604	+		LRK53_RS14265	0.73	-0.1
3,128,604	+		LRK53_RS14265	0.73	-1.4
3,128,605	-		LRK53_RS14265	0.73	-2.1
3,128,605	-		LRK53_RS14265	0.73	-1.4
3,128,605	-		LRK53_RS14265	0.73	-0.6
3,128,605	-		LRK53_RS14265	0.73	-1.6
3,128,605	-		LRK53_RS14265	0.73	-0.8
3,128,605	-		LRK53_RS14265	0.73	-0.2
3,128,605	-		LRK53_RS14265	0.73	-1.1
3,128,612	+		LRK53_RS14265	0.73	-1.8
3,128,613	-		LRK53_RS14265	0.74	-1.3
3,128,613	-		LRK53_RS14265	0.74	+0.9
3,128,686	+		LRK53_RS14265	0.77	-0.1
3,128,687	-		LRK53_RS14265	0.77	-0.1
3,128,821	+		LRK53_RS14265	0.83	-2.2
3,128,821	+		LRK53_RS14265	0.83	-1.1
3,128,821	+		LRK53_RS14265	0.83	+0.9
3,128,821	+		LRK53_RS14265	0.83	-0.4
3,128,821	+		LRK53_RS14265	0.83	-0.1
3,128,821	+		LRK53_RS14265	0.83	-0.6
3,128,821	+		LRK53_RS14265	0.83	-1.1
3,128,821	+		LRK53_RS14265	0.83	-1.1
3,128,821	+		LRK53_RS14265	0.83	+0.9
3,128,821	+		LRK53_RS14265	0.83	-0.1
3,128,822	-		LRK53_RS14265	0.83	-1.4
3,128,822	-		LRK53_RS14265	0.83	-0.2
3,128,822	-		LRK53_RS14265	0.83	+1.4
3,128,822	-		LRK53_RS14265	0.83	+0.9
3,128,822	-		LRK53_RS14265	0.83	-0.3
3,128,882	-		LRK53_RS14265	0.85	-0.1
3,128,882	-		LRK53_RS14265	0.85	-0.6
3,128,891	-		LRK53_RS14265	0.86	-0.6
3,128,896	+		LRK53_RS14265	0.86	-1.4
3,128,896	+		LRK53_RS14265	0.86	+0.1
3,128,896	+		LRK53_RS14265	0.86	-0.4
3,128,896	+		LRK53_RS14265	0.86	+0.9
3,128,897	-		LRK53_RS14265	0.86	-0.1
3,128,917	+		LRK53_RS14265	0.87	-1.5
3,128,917	+		LRK53_RS14265	0.87	-1.9
3,128,917	+		LRK53_RS14265	0.87	-0.8
3,128,917	+		LRK53_RS14265	0.87	-1.2
3,128,917	+		LRK53_RS14265	0.87	-0.6
3,128,918	-		LRK53_RS14265	0.87	-0.6
3,128,918	-		LRK53_RS14265	0.87	-0.7
3,128,918	-		LRK53_RS14265	0.87	-1.5
3,128,918	-		LRK53_RS14265	0.87	-0.1
3,128,918	-		LRK53_RS14265	0.87	-0.6
3,128,992	+				+0.5
3,128,992	+				+0.5
3,128,992	+				-1.6
3,128,992	+				-1.9
3,128,992	+				+0.9
3,128,992	+				-2.4
3,128,992	+				-0.8
3,128,992	+				-0.6
3,128,992	+				-0.1
3,128,992	+				-0.4
3,128,992	+				-0.5
3,128,992	+				-1.2
3,128,992	+				-0.6
3,128,992	+				-3.6
3,128,992	+				-0.6
3,128,992	+				-0.1
3,128,992	+				-0.6
3,128,993	-				-0.8
3,128,993	-				+0.2
3,128,993	-				-1.8
3,128,993	-				-3.1
3,128,993	-				-0.6
3,128,993	-				+0.9
3,128,993	-				-1.1
3,128,993	-				-1.1
3,128,993	-				-1.2
3,128,993	-				-0.3
3,128,993	-				+0.4
3,128,993	-				-0.2
3,128,993	-				-0.6
3,128,993	-				-1.6
3,128,993	-				-0.1
3,128,993	-				-1.4
3,128,993	-				-0.6
3,128,993	-				-0.7
3,128,993	-				+0.4
3,129,010	+				-1.2
3,129,010	+				-0.2
3,129,010	+				-1.4
3,129,011	-				-1.6
3,129,011	-				-2.9
3,129,011	-				-1.2
3,129,045	+				-0.4
3,129,045	+				-0.1
3,129,045	+				-1.4
3,129,046	-				-0.8
3,129,046	-				-0.3
3,129,046	-				-1.6
3,129,046	-				+0.9
3,129,046	-				-1.4
3,129,046	-				-0.1
3,129,046	-				+0.6
3,129,046	-				-0.9
3,129,046	-				-0.7
3,129,046	-				-0.6
3,129,046	-				+0.1
3,129,046	-				-1.7
3,129,046	-				-0.1
3,129,046	-				-2.6
3,129,139	+				-1.1
3,129,140	-				-1.1
3,129,140	-				-0.1
3,129,221	+				-1.6
3,129,221	+				+1.7
3,129,221	+				-1.4
3,129,221	+				-0.1
3,129,221	+				+0.6
3,129,222	-				-1.9
3,129,222	-				-1.4
3,129,222	-				-1.9
3,129,222	-				+0.5
3,129,222	-				+0.9
3,129,222	-				-1.1
3,129,237	-				+0.9
3,129,255	+				-0.1
3,129,255	+				+2.5
3,129,255	+				-1.1
3,129,255	+				+0.2
3,129,255	+				-0.3
3,129,255	+				-1.5
3,129,255	+				+0.9
3,129,255	+				+1.5
3,129,255	+				-1.1
3,129,255	+				-0.9
3,129,255	+				+0.2
3,129,255	+				-0.2
3,129,255	+				-1.2
3,129,255	+				-1.0
3,129,255	+				+0.9
3,129,255	+				-0.4
3,129,255	+				-0.7
3,129,255	+				+0.2
3,129,256	-				+2.5
3,129,256	-				+1.5
3,129,256	-				-0.1
3,129,256	-				+0.6
3,129,256	-				+0.9
3,129,256	-				-0.4
3,129,256	-				+0.9
3,129,256	-				-0.6
3,129,256	-				+0.4
3,129,257	+				-0.1
3,129,257	+				+1.3
3,129,257	+				-0.8
3,129,257	+				+1.9
3,129,257	+				-1.1
3,129,257	+				+0.2
3,129,257	+				-0.9
3,129,257	+				-0.1
3,129,257	+				+0.9
3,129,258	-				-0.4
3,129,258	-				+0.9
3,129,258	-				-1.4
3,129,258	-				+1.9
3,129,258	-				-0.8
3,129,281	+				+0.9
3,129,281	+				+1.9
3,129,281	+				+1.5
3,129,281	+				-0.9
3,129,282	-				-1.1
3,129,337	+				+0.2
3,129,337	+				-0.3
3,129,337	+				-0.2
3,129,337	+				+1.9
3,129,337	+				-0.6
3,129,338	-				-1.4
3,129,338	-				-2.2
3,129,554	+		LRK53_RS14270	0.20	+0.4
3,129,554	+		LRK53_RS14270	0.20	-1.6
3,129,555	-		LRK53_RS14270	0.20	-1.3
3,129,555	-		LRK53_RS14270	0.20	-1.6
3,129,555	-		LRK53_RS14270	0.20	+0.9
3,129,584	+		LRK53_RS14270	0.22	+0.9
3,129,584	+		LRK53_RS14270	0.22	+0.4
3,129,584	+		LRK53_RS14270	0.22	-1.1
3,129,584	+		LRK53_RS14270	0.22	-1.2
3,129,584	+		LRK53_RS14270	0.22	-0.6
3,129,584	+		LRK53_RS14270	0.22	-0.2
3,129,584	+		LRK53_RS14270	0.22	-1.6
3,129,584	+		LRK53_RS14270	0.22	-0.3
3,129,585	-		LRK53_RS14270	0.22	-1.1
3,129,585	-		LRK53_RS14270	0.22	-1.4
3,129,585	-		LRK53_RS14270	0.22	+0.9
3,129,585	-		LRK53_RS14270	0.22	-1.7
3,129,585	-		LRK53_RS14270	0.22	-0.6
3,129,692	+		LRK53_RS14270	0.29	-1.6
3,129,693	-		LRK53_RS14270	0.29	-1.1
3,129,693	-		LRK53_RS14270	0.29	-0.6
3,130,364	+		LRK53_RS14270	0.69	-1.6
3,130,364	+		LRK53_RS14270	0.69	-0.4
3,130,364	+		LRK53_RS14270	0.69	-1.3
3,130,364	+		LRK53_RS14270	0.69	-0.6
3,130,365	-		LRK53_RS14270	0.70	-1.3
3,130,365	-		LRK53_RS14270	0.70	-1.4
3,130,402	-		LRK53_RS14270	0.72	-1.8
3,130,402	-		LRK53_RS14270	0.72	-1.0
3,130,402	-		LRK53_RS14270	0.72	-1.1
3,130,424	+		LRK53_RS14270	0.73	-0.1
3,130,424	+		LRK53_RS14270	0.73	+0.9
3,130,424	+		LRK53_RS14270	0.73	-1.2
3,130,424	+		LRK53_RS14270	0.73	-0.1
3,130,425	-		LRK53_RS14270	0.73	+0.4
3,130,425	-		LRK53_RS14270	0.73	-0.6
3,130,425	-		LRK53_RS14270	0.73	-0.4
3,130,425	-		LRK53_RS14270	0.73	-0.4
3,130,425	-		LRK53_RS14270	0.73	-0.6
3,130,425	-		LRK53_RS14270	0.73	+0.5
3,130,451	+		LRK53_RS14270	0.75	-1.1
3,130,451	+		LRK53_RS14270	0.75	+0.5
3,130,451	+		LRK53_RS14270	0.75	-0.9
3,130,452	-		LRK53_RS14270	0.75	+0.9
3,130,452	-		LRK53_RS14270	0.75	-0.6
3,130,452	-		LRK53_RS14270	0.75	-1.6
3,130,452	-		LRK53_RS14270	0.75	+0.9
3,130,452	-		LRK53_RS14270	0.75	-0.0
3,130,452	-		LRK53_RS14270	0.75	-0.8
3,130,452	-		LRK53_RS14270	0.75	-0.6
3,130,491	+		LRK53_RS14270	0.77	-1.9
3,130,491	+		LRK53_RS14270	0.77	-0.1
3,130,491	+		LRK53_RS14270	0.77	-1.4
3,130,491	+		LRK53_RS14270	0.77	-1.0
3,130,491	+		LRK53_RS14270	0.77	-0.6
3,130,492	-		LRK53_RS14270	0.77	-0.1
3,130,492	-		LRK53_RS14270	0.77	-1.4
3,130,561	+		LRK53_RS14270	0.81	-1.1
3,130,561	+		LRK53_RS14270	0.81	-1.1
3,130,561	+		LRK53_RS14270	0.81	+0.1
3,130,561	+		LRK53_RS14270	0.81	-0.8
3,130,561	+		LRK53_RS14270	0.81	-1.6
3,130,561	+		LRK53_RS14270	0.81	+0.2
3,130,562	-		LRK53_RS14270	0.81	-0.2
3,130,562	-		LRK53_RS14270	0.81	-0.5
3,130,562	-		LRK53_RS14270	0.81	-0.1
3,130,562	-		LRK53_RS14270	0.81	-1.4
3,130,562	-		LRK53_RS14270	0.81	-1.9
3,130,562	-		LRK53_RS14270	0.81	-0.9
3,130,565	+		LRK53_RS14270	0.82	-0.3
3,130,565	+		LRK53_RS14270	0.82	-1.2
3,130,565	+		LRK53_RS14270	0.82	-0.9
3,130,565	+		LRK53_RS14270	0.82	-1.1
3,130,565	+		LRK53_RS14270	0.82	-0.1
3,130,565	+		LRK53_RS14270	0.82	-0.4
3,130,565	+		LRK53_RS14270	0.82	-2.1
3,130,565	+		LRK53_RS14270	0.82	+0.1
3,130,566	-		LRK53_RS14270	0.82	-0.4
3,130,566	-		LRK53_RS14270	0.82	-2.4
3,130,566	-		LRK53_RS14270	0.82	-1.1
3,130,566	-		LRK53_RS14270	0.82	-0.9
3,130,617	+		LRK53_RS14270	0.85	-1.2
3,130,617	+		LRK53_RS14270	0.85	-0.9
3,130,617	+		LRK53_RS14270	0.85	+0.9
3,130,617	+		LRK53_RS14270	0.85	+0.9
3,130,617	+		LRK53_RS14270	0.85	-0.6
3,130,617	+		LRK53_RS14270	0.85	-1.1
3,130,617	+		LRK53_RS14270	0.85	-0.6
3,130,617	+		LRK53_RS14270	0.85	-2.2
3,130,617	+		LRK53_RS14270	0.85	-2.3
3,130,617	+		LRK53_RS14270	0.85	-1.4
3,130,617	+		LRK53_RS14270	0.85	+0.4
3,130,618	-		LRK53_RS14270	0.85	-0.1
3,130,618	-		LRK53_RS14270	0.85	-0.9
3,130,618	-		LRK53_RS14270	0.85	-0.3
3,130,618	-		LRK53_RS14270	0.85	-1.4
3,130,618	-		LRK53_RS14270	0.85	-0.3
3,130,618	-		LRK53_RS14270	0.85	-1.4
3,130,618	-		LRK53_RS14270	0.85	-0.2
3,130,618	-		LRK53_RS14270	0.85	-0.4
3,130,618	-		LRK53_RS14270	0.85	-0.6
3,130,618	-		LRK53_RS14270	0.85	+0.1
3,130,618	-		LRK53_RS14270	0.85	-1.1
3,130,618	-		LRK53_RS14270	0.85	-0.1
3,130,658	+		LRK53_RS14270	0.87	-1.5
3,130,658	+		LRK53_RS14270	0.87	-0.1
3,130,658	+		LRK53_RS14270	0.87	-1.2
3,130,658	+		LRK53_RS14270	0.87	+1.9
3,130,658	+		LRK53_RS14270	0.87	-0.1
3,130,658	+		LRK53_RS14270	0.87	-1.1
3,130,659	-		LRK53_RS14270	0.87	-1.4
3,130,659	-		LRK53_RS14270	0.87	+0.4
3,130,659	-		LRK53_RS14270	0.87	-0.1
3,130,659	-		LRK53_RS14270	0.87	-1.8
3,130,659	-		LRK53_RS14270	0.87	-1.1
3,130,659	-		LRK53_RS14270	0.87	-0.1
3,130,659	-		LRK53_RS14270	0.87	-0.6
3,130,837	+				+0.3
3,130,837	+				-1.9
3,130,837	+				-0.1
3,130,838	-				-0.6
3,130,838	-				-1.6
3,130,922	-				-1.1
3,130,927	+				-0.9
3,130,956	+				-0.1
3,131,027	+				+0.9
3,131,027	+				-0.6
3,131,194	-				-0.2
3,131,229	+				-1.3
3,131,230	+				-0.7
3,131,236	+				-0.3
3,131,237	-				-0.3
3,131,237	-				-1.1
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3,131,246	-				-0.6
3,131,246	-				-0.6
3,131,304	+				-2.8
3,131,315	+				-0.6
3,131,364	+				-1.4
3,131,377	-				-0.5
3,131,406	-				+0.2
3,131,436	+				+0.0
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3,131,436	+				-1.2
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3,131,437	-				-1.2
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3,131,437	-				-1.9
3,131,483	+				-1.0
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3,131,484	-				-1.4
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3,131,484	-				-0.5
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3,131,574	+				-0.1
3,131,601	-				-0.3
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3,131,611	-				-0.8
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3,131,738	+				+0.2
3,131,810	+		LRK53_RS14275	0.11	-2.0
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3,131,810	+		LRK53_RS14275	0.11	-0.8
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3,131,817	+		LRK53_RS14275	0.12	-1.9
3,131,828	+		LRK53_RS14275	0.13	-1.9
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3,131,828	+		LRK53_RS14275	0.13	-1.1
3,131,828	+		LRK53_RS14275	0.13	+0.2
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3,131,829	-		LRK53_RS14275	0.14	-0.1
3,131,829	-		LRK53_RS14275	0.14	+0.9