Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS11010

Experiment: R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Cadmium chloride hemipentahydrate 64 uM
2,458,213	+		LRK53_RS11000	0.72	-1.1
2,458,214	-		LRK53_RS11000	0.72	+0.1
2,458,214	-		LRK53_RS11000	0.72	-1.7
2,458,214	-		LRK53_RS11000	0.72	-0.7
2,458,214	-		LRK53_RS11000	0.72	-1.1
2,458,264	+		LRK53_RS11000	0.75	-0.6
2,458,264	+		LRK53_RS11000	0.75	-0.4
2,458,280	+		LRK53_RS11000	0.76	-0.1
2,458,280	+		LRK53_RS11000	0.76	-1.1
2,458,281	-		LRK53_RS11000	0.76	+1.9
2,458,281	-		LRK53_RS11000	0.76	+0.9
2,458,281	-		LRK53_RS11000	0.76	-2.0
2,458,531	+		LRK53_RS11000	0.88	+1.2
2,458,531	+		LRK53_RS11000	0.88	-1.3
2,458,571	+				-1.9
2,458,572	-				-1.7
2,458,662	-				-2.3
2,458,662	-				-0.3
2,458,682	-				-0.4
2,458,682	-				+0.1
2,458,753	+				+0.9
2,458,753	+				-1.4
2,458,883	-		LRK53_RS11005	0.17	-1.5
2,458,883	-		LRK53_RS11005	0.17	-0.7
2,458,883	-		LRK53_RS11005	0.17	-1.5
2,458,895	+		LRK53_RS11005	0.26	-0.1
2,458,896	-		LRK53_RS11005	0.27	-0.9
2,458,896	-		LRK53_RS11005	0.27	-0.7
2,458,997	+				+0.3
2,459,053	+				-1.6
2,459,053	+				-0.7
2,459,053	+				+0.9
2,459,053	+				-0.1
2,459,135	+				-1.1
2,459,135	+				-1.6
2,459,135	+				-0.1
2,459,135	+				-0.6
2,459,136	-				-1.6
2,459,136	-				-0.2
2,459,136	-				-0.1
2,459,136	-				-0.1
2,459,271	+				+1.1
2,459,272	-				-1.3
2,459,272	-				-0.7
2,459,310	+				-1.0
2,459,310	+				-0.7
2,459,310	+				+0.5
2,459,310	+				+0.3
2,459,311	-				+0.9
2,459,311	-				-1.1
2,459,373	+				-1.3
2,459,374	-				-0.1
2,459,395	-				-0.1
2,459,395	-				-1.2
2,459,473	-				+0.5
2,459,473	-				-0.1
2,459,643	+		LRK53_RS11010	0.14	-0.1
2,459,643	+		LRK53_RS11010	0.14	-0.5
2,459,643	+		LRK53_RS11010	0.14	-0.6
2,459,644	-		LRK53_RS11010	0.14	-1.7
2,459,667	+		LRK53_RS11010	0.15	-0.5
2,459,668	-		LRK53_RS11010	0.15	-0.5
2,459,836	-		LRK53_RS11010	0.20	-1.0
2,459,878	-		LRK53_RS11010	0.22	-1.4
2,459,878	-		LRK53_RS11010	0.22	-0.1
2,459,985	+		LRK53_RS11010	0.25	-1.1
2,459,985	+		LRK53_RS11010	0.25	-0.5
2,459,985	+		LRK53_RS11010	0.25	-0.6
2,459,985	+		LRK53_RS11010	0.25	-1.9
2,459,985	+		LRK53_RS11010	0.25	-0.7
2,459,985	+		LRK53_RS11010	0.25	-0.1
2,459,985	+		LRK53_RS11010	0.25	-0.6
2,459,986	-		LRK53_RS11010	0.25	+0.4
2,459,986	-		LRK53_RS11010	0.25	+0.3
2,459,986	-		LRK53_RS11010	0.25	+0.9
2,459,986	-		LRK53_RS11010	0.25	-1.5
2,459,986	-		LRK53_RS11010	0.25	-0.5
2,459,986	-		LRK53_RS11010	0.25	+0.1
2,459,986	-		LRK53_RS11010	0.25	+0.9
2,459,988	+		LRK53_RS11010	0.25	+0.1
2,459,988	+		LRK53_RS11010	0.25	-0.7
2,459,988	+		LRK53_RS11010	0.25	-0.1
2,459,988	+		LRK53_RS11010	0.25	-0.5
2,459,988	+		LRK53_RS11010	0.25	-1.5
2,459,988	+		LRK53_RS11010	0.25	+0.3
2,459,989	-		LRK53_RS11010	0.25	-1.5
2,459,989	-		LRK53_RS11010	0.25	-1.3
2,459,989	-		LRK53_RS11010	0.25	-1.9
2,459,989	-		LRK53_RS11010	0.25	-0.8
2,459,989	-		LRK53_RS11010	0.25	+0.9
2,460,009	+		LRK53_RS11010	0.26	+0.9
2,460,018	+		LRK53_RS11010	0.26	-0.3
2,460,019	-		LRK53_RS11010	0.26	-0.9
2,460,055	+		LRK53_RS11010	0.27	-1.8
2,460,057	+		LRK53_RS11010	0.27	-0.1
2,460,057	+		LRK53_RS11010	0.27	+0.1
2,460,057	+		LRK53_RS11010	0.27	+0.9
2,460,057	+		LRK53_RS11010	0.27	-1.1
2,460,057	+		LRK53_RS11010	0.27	-1.1
2,460,058	-		LRK53_RS11010	0.27	+0.0
2,460,340	+		LRK53_RS11010	0.36	-1.5
2,460,340	+		LRK53_RS11010	0.36	+0.4
2,460,340	+		LRK53_RS11010	0.36	-0.7
2,460,384	+		LRK53_RS11010	0.38	+0.9
2,460,384	+		LRK53_RS11010	0.38	-0.9
2,460,384	+		LRK53_RS11010	0.38	+1.9
2,460,385	-		LRK53_RS11010	0.38	+1.9
2,460,614	+		LRK53_RS11010	0.45	+0.9
2,460,615	-		LRK53_RS11010	0.45	-0.4
2,460,615	-		LRK53_RS11010	0.45	-0.7
2,460,651	+		LRK53_RS11010	0.47	+0.4
2,460,667	-		LRK53_RS11010	0.47	-0.7
2,460,676	+		LRK53_RS11010	0.47	-2.1
2,460,758	+		LRK53_RS11010	0.50	-0.1
2,460,758	+		LRK53_RS11010	0.50	-0.1
2,460,759	-		LRK53_RS11010	0.50	+2.9
2,460,759	-		LRK53_RS11010	0.50	-1.7
2,460,759	-		LRK53_RS11010	0.50	+0.3
2,460,839	+		LRK53_RS11010	0.53	+1.9
2,460,840	-		LRK53_RS11010	0.53	+0.9
2,460,957	+		LRK53_RS11010	0.56	-0.6
2,460,957	+		LRK53_RS11010	0.56	-0.9
2,460,957	+		LRK53_RS11010	0.56	-1.0
2,460,958	-		LRK53_RS11010	0.56	-0.7
2,460,958	-		LRK53_RS11010	0.56	+0.9
2,460,958	-		LRK53_RS11010	0.56	-0.1
2,460,958	-		LRK53_RS11010	0.56	-1.0
2,460,958	-		LRK53_RS11010	0.56	-0.9
2,460,958	-		LRK53_RS11010	0.56	-0.1
2,460,993	+		LRK53_RS11010	0.58	-0.4
2,460,994	-		LRK53_RS11010	0.58	+0.2
2,461,071	-		LRK53_RS11010	0.60	-0.4
2,461,089	+		LRK53_RS11010	0.61	+0.4
2,461,090	-		LRK53_RS11010	0.61	-0.1
2,461,221	+		LRK53_RS11010	0.65	-0.1
2,461,221	+		LRK53_RS11010	0.65	-1.2
2,461,221	+		LRK53_RS11010	0.65	-0.9
2,461,221	+		LRK53_RS11010	0.65	-1.1
2,461,221	+		LRK53_RS11010	0.65	-0.9
2,461,221	+		LRK53_RS11010	0.65	-1.9
2,461,221	+		LRK53_RS11010	0.65	-0.6
2,461,222	-		LRK53_RS11010	0.65	-0.1
2,461,222	-		LRK53_RS11010	0.65	-1.5
2,461,225	+		LRK53_RS11010	0.65	-1.7
2,461,225	+		LRK53_RS11010	0.65	-1.9
2,461,226	-		LRK53_RS11010	0.65	-0.5
2,461,226	-		LRK53_RS11010	0.65	-1.1
2,461,266	-		LRK53_RS11010	0.66	-1.1
2,461,266	-		LRK53_RS11010	0.66	-0.7
2,461,266	-		LRK53_RS11010	0.66	+1.6
2,461,299	+		LRK53_RS11010	0.67	-0.6
2,461,299	+		LRK53_RS11010	0.67	+0.9
2,461,299	+		LRK53_RS11010	0.67	+2.2
2,461,389	+		LRK53_RS11010	0.70	-0.9
2,461,390	-		LRK53_RS11010	0.70	-0.0
2,461,390	-		LRK53_RS11010	0.70	-0.7
2,461,420	-		LRK53_RS11010	0.71	+0.9
2,461,420	-		LRK53_RS11010	0.71	-0.1
2,461,441	+		LRK53_RS11010	0.72	-1.1
2,461,442	-		LRK53_RS11010	0.72	-0.7
2,461,488	+		LRK53_RS11010	0.74	-0.9
2,461,488	+		LRK53_RS11010	0.74	-1.1
2,461,488	+		LRK53_RS11010	0.74	-1.7
2,461,488	+		LRK53_RS11010	0.74	-0.1
2,461,506	+		LRK53_RS11010	0.74	-1.1
2,461,506	+		LRK53_RS11010	0.74	-0.1
2,461,507	-		LRK53_RS11010	0.74	-2.2
2,461,507	-		LRK53_RS11010	0.74	+0.3
2,461,507	-		LRK53_RS11010	0.74	-0.7
2,461,551	-		LRK53_RS11010	0.76	-0.5
2,461,551	-		LRK53_RS11010	0.76	-1.7
2,461,551	-		LRK53_RS11010	0.76	-0.0
2,461,551	-		LRK53_RS11010	0.76	+1.3
2,461,674	+		LRK53_RS11010	0.79	-1.1
2,461,674	+		LRK53_RS11010	0.79	-1.9
2,461,675	-		LRK53_RS11010	0.80	-0.7
2,461,688	+		LRK53_RS11010	0.80	+0.3
2,461,688	+		LRK53_RS11010	0.80	-1.5
2,461,689	-		LRK53_RS11010	0.80	+1.7
2,461,689	-		LRK53_RS11010	0.80	-0.3
2,461,710	+		LRK53_RS11010	0.81	-0.7
2,461,710	+		LRK53_RS11010	0.81	-0.5
2,461,711	-		LRK53_RS11010	0.81	-0.1
2,461,711	-		LRK53_RS11010	0.81	-0.6
2,461,711	-		LRK53_RS11010	0.81	-1.4
2,461,739	+		LRK53_RS11010	0.82	-1.7
2,461,740	-		LRK53_RS11010	0.82	+0.3
2,461,815	+		LRK53_RS11010	0.84	+0.4
2,461,815	+		LRK53_RS11010	0.84	+0.3
2,461,815	+		LRK53_RS11010	0.84	+0.9
2,461,816	-		LRK53_RS11010	0.84	-0.5
2,461,816	-		LRK53_RS11010	0.84	-0.9
2,461,816	-		LRK53_RS11010	0.84	-0.9
2,461,816	-		LRK53_RS11010	0.84	-0.3
2,461,816	-		LRK53_RS11010	0.84	-1.9
2,461,816	-		LRK53_RS11010	0.84	+0.3
2,461,816	-		LRK53_RS11010	0.84	+0.9
2,461,816	-		LRK53_RS11010	0.84	+0.9
2,461,951	-		LRK53_RS11010	0.88	-0.1
2,461,951	-		LRK53_RS11010	0.88	-1.0
2,461,951	-		LRK53_RS11010	0.88	+1.9
2,461,951	-		LRK53_RS11010	0.88	+0.9
2,461,951	-		LRK53_RS11010	0.88	-0.4
2,462,071	-				-1.1
2,462,071	-				-0.5
2,462,097	+				+0.1
2,462,097	+				-0.5
2,462,097	+				-1.1
2,462,097	+				-0.7
2,462,097	+				-0.5
2,462,097	+				-0.1
2,462,097	+				-0.1
2,462,097	+				+0.3
2,462,097	+				-0.5
2,462,097	+				-1.3
2,462,097	+				-0.3
2,462,097	+				-1.5
2,462,098	-				-1.5
2,462,098	-				+0.3
2,462,098	-				-1.5
2,462,098	-				-0.4
2,462,098	-				+0.1
2,462,098	-				-0.1
2,462,098	-				-0.1
2,462,098	-				-0.1
2,462,098	-				-1.7
2,462,098	-				+0.3
2,462,098	-				-0.7
2,462,098	-				+0.5
2,462,098	-				-1.0
2,462,098	-				+0.4
2,462,098	-				-0.7
2,462,098	-				+0.9
2,462,152	+				-0.1
2,462,174	+				-1.3
2,462,174	+				-1.9
2,462,174	+				-0.1
2,462,174	+				-0.3
2,462,174	+				-1.5
2,462,174	+				-0.3
2,462,175	-				+0.9
2,462,175	-				+0.3
2,462,175	-				-1.5
2,462,175	-				-0.1
2,462,175	-				-0.4
2,462,175	-				+0.1
2,462,175	-				+0.9
2,462,175	-				-0.3
2,462,175	-				+0.9
2,462,182	+				-0.1
2,462,182	+				-0.4
2,462,182	+				+0.1
2,462,182	+				-0.6
2,462,182	+				-2.0
2,462,182	+				-0.7
2,462,183	-				-0.9
2,462,183	-				-1.7
2,462,183	-				-1.5
2,462,262	+				-1.4
2,462,262	+				-1.7
2,462,263	-				+0.3
2,462,313	+				-0.9
2,462,313	+				+0.3
2,462,314	-				-1.1
2,462,338	+				-1.9
2,462,338	+				-0.6
2,462,338	+				-0.7
2,462,363	+				-1.2
2,462,363	+				-0.2
2,462,364	-				-0.8
2,462,384	+				-1.0
2,462,385	-				+0.5
2,462,401	+		LRK53_RS11015	0.11	-1.4
2,462,401	+		LRK53_RS11015	0.11	-1.1
2,462,402	-		LRK53_RS11015	0.11	-0.5
2,462,402	-		LRK53_RS11015	0.11	+0.5
2,462,402	-		LRK53_RS11015	0.11	-1.0
2,462,430	+		LRK53_RS11015	0.19	-1.0
2,462,431	-		LRK53_RS11015	0.19	-0.1
2,462,431	-		LRK53_RS11015	0.19	-2.2
2,462,432	+		LRK53_RS11015	0.19	+0.9
2,462,432	+		LRK53_RS11015	0.19	-2.3
2,462,432	+		LRK53_RS11015	0.19	-0.3
2,462,432	+		LRK53_RS11015	0.19	-0.7
2,462,432	+		LRK53_RS11015	0.19	+0.9
2,462,432	+		LRK53_RS11015	0.19	-1.3
2,462,433	-		LRK53_RS11015	0.20	+0.9
2,462,433	-		LRK53_RS11015	0.20	-1.6
2,462,433	-		LRK53_RS11015	0.20	+0.9
2,462,433	-		LRK53_RS11015	0.20	-0.1
2,462,433	-		LRK53_RS11015	0.20	-1.1
2,462,433	-		LRK53_RS11015	0.20	-1.0
2,462,433	-		LRK53_RS11015	0.20	-0.1
2,462,433	-		LRK53_RS11015	0.20	-0.1
2,462,651	+		LRK53_RS11015	0.80	-0.5
2,462,652	-		LRK53_RS11015	0.80	+0.3
2,462,660	+		LRK53_RS11015	0.82	+0.2
2,462,660	+		LRK53_RS11015	0.82	-2.3
2,462,660	+		LRK53_RS11015	0.82	-1.9
2,462,660	+		LRK53_RS11015	0.82	+0.3
2,462,660	+		LRK53_RS11015	0.82	+0.1
2,462,660	+		LRK53_RS11015	0.82	-0.1
2,462,661	-		LRK53_RS11015	0.82	-1.9
2,462,661	-		LRK53_RS11015	0.82	+0.3
2,462,661	-		LRK53_RS11015	0.82	+0.1
2,462,661	-		LRK53_RS11015	0.82	+1.3
2,462,694	+				+0.9
2,462,694	+				-1.5
2,462,694	+				-1.3
2,462,694	+				-2.3
2,462,741	+				-0.4
2,462,741	+				+0.9
2,462,741	+				-1.1
2,462,756	-				-0.6
2,462,777	+				+0.7
2,462,975	+				-1.5
2,462,975	+				-1.1
2,462,976	-				-1.1
2,463,032	-				-0.1
2,463,185	+				-0.1
2,463,185	+				-0.5
2,463,186	-				+0.4
2,463,186	-				+0.9
2,463,197	-				-1.5
2,463,197	-				-1.6
2,463,282	+		LRK53_RS11020	0.13	-0.5
2,463,283	-		LRK53_RS11020	0.13	-1.7