Strain Fitness in Escherichia coli ECRC98 around JDDGAC_26580

Experiment: WM_Bas68

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas68
5,088,508	+	aroC	JDDGAC_26575	0.15	+1.3
5,088,568	+	aroC	JDDGAC_26575	0.21	-0.0
5,088,675	-	aroC	JDDGAC_26575	0.30	-0.8
5,088,909	+	aroC	JDDGAC_26575	0.52	-1.7
5,088,909	+	aroC	JDDGAC_26575	0.52	-2.5
5,088,910	-	aroC	JDDGAC_26575	0.52	-0.9
5,089,210	+	aroC	JDDGAC_26575	0.80	+4.1
5,089,234	+	aroC	JDDGAC_26575	0.82	-1.4
5,089,414	+				-0.8
5,089,414	+				+1.3
5,089,415	-				+1.1
5,089,415	-				+1.7
5,089,564	+	mepA	JDDGAC_26580	0.16	-2.7
5,089,635	-	mepA	JDDGAC_26580	0.24	-3.5
5,089,679	-	mepA	JDDGAC_26580	0.30	-3.2
5,089,705	+	mepA	JDDGAC_26580	0.33	+2.1
5,089,860	+	mepA	JDDGAC_26580	0.52	+0.2
5,090,059	+	mepA	JDDGAC_26580	0.76	-0.8
5,090,059	+	mepA	JDDGAC_26580	0.76	+3.0
5,090,067	+	mepA	JDDGAC_26580	0.77	+2.2
5,090,067	+	mepA	JDDGAC_26580	0.77	+1.3
5,090,068	-	mepA	JDDGAC_26580	0.77	+1.6
5,090,068	-	mepA	JDDGAC_26580	0.77	+1.3
5,090,073	+	mepA	JDDGAC_26580	0.78	-1.6
5,090,074	-	mepA	JDDGAC_26580	0.78	-0.6
5,090,269	-				+1.8
5,090,271	+				+2.2
5,090,281	-				-2.2
5,090,367	-	yfcA	JDDGAC_26585	0.14	-1.7
5,090,427	+	yfcA	JDDGAC_26585	0.21	-0.1
5,090,427	+	yfcA	JDDGAC_26585	0.21	-3.2
5,090,463	+	yfcA	JDDGAC_26585	0.25	+0.6
5,090,463	+	yfcA	JDDGAC_26585	0.25	+0.9
5,090,463	+	yfcA	JDDGAC_26585	0.25	-2.0
5,090,464	-	yfcA	JDDGAC_26585	0.26	-2.8
5,090,468	-	yfcA	JDDGAC_26585	0.26	-0.3
5,090,511	+	yfcA	JDDGAC_26585	0.31	-2.6
5,090,511	+	yfcA	JDDGAC_26585	0.31	-1.3
5,090,511	+	yfcA	JDDGAC_26585	0.31	-3.9
5,090,515	-	yfcA	JDDGAC_26585	0.32	-0.1
5,090,558	+	yfcA	JDDGAC_26585	0.37	-1.3
5,090,559	-	yfcA	JDDGAC_26585	0.37	-1.2
5,090,564	-	yfcA	JDDGAC_26585	0.38	+1.4
5,090,582	+	yfcA	JDDGAC_26585	0.40	-0.5
5,090,624	-	yfcA	JDDGAC_26585	0.45	+2.8
5,090,674	+	yfcA	JDDGAC_26585	0.51	+0.7
5,090,674	+	yfcA	JDDGAC_26585	0.51	-1.1
5,090,675	-	yfcA	JDDGAC_26585	0.52	-0.4
5,090,719	+	yfcA	JDDGAC_26585	0.57	+3.8
5,090,860	-	yfcA	JDDGAC_26585	0.74	-0.8
5,091,015	-				-0.2
5,091,020	-				-1.7
5,091,024	+				-0.2
5,091,024	+				-2.6
5,091,074	+				+0.4
5,091,075	-				-2.5
5,091,075	-				-2.4
5,091,084	+				-0.7
5,091,085	-				-2.5
5,091,085	-				-0.0
5,091,107	+				-1.3
5,091,132	-	epmC	JDDGAC_26590	0.12	+2.0
5,091,168	+	epmC	JDDGAC_26590	0.19	+0.9
5,091,169	-	epmC	JDDGAC_26590	0.19	+1.7
5,091,195	+	epmC	JDDGAC_26590	0.23	-2.7
5,091,195	+	epmC	JDDGAC_26590	0.23	+1.5
5,091,195	+	epmC	JDDGAC_26590	0.23	+0.1
5,091,195	+	epmC	JDDGAC_26590	0.23	+1.6
5,091,195	+	epmC	JDDGAC_26590	0.23	-1.4
5,091,196	-	epmC	JDDGAC_26590	0.24	-0.7
5,091,197	+	epmC	JDDGAC_26590	0.24	+2.8