Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05500

Experiment: R2A_PIPES with Aluminum chloride 1.125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES with Aluminum chloride 1.125 mM
1,281,816	-		LRK53_RS05495	0.77	-0.2
1,281,855	+		LRK53_RS05495	0.78	-2.1
1,281,855	+		LRK53_RS05495	0.78	-0.1
1,281,855	+		LRK53_RS05495	0.78	+0.2
1,281,855	+		LRK53_RS05495	0.78	-1.1
1,281,855	+		LRK53_RS05495	0.78	+0.1
1,281,855	+		LRK53_RS05495	0.78	-0.1
1,281,855	+		LRK53_RS05495	0.78	-0.5
1,281,855	+		LRK53_RS05495	0.78	-1.2
1,281,855	+		LRK53_RS05495	0.78	-0.1
1,281,856	-		LRK53_RS05495	0.78	-2.5
1,281,856	-		LRK53_RS05495	0.78	+0.4
1,281,856	-		LRK53_RS05495	0.78	+0.9
1,281,856	-		LRK53_RS05495	0.78	-0.7
1,281,856	-		LRK53_RS05495	0.78	-0.7
1,281,856	-		LRK53_RS05495	0.78	-0.3
1,281,856	-		LRK53_RS05495	0.78	+0.9
1,281,856	-		LRK53_RS05495	0.78	-1.4
1,281,856	-		LRK53_RS05495	0.78	+0.2
1,281,856	-		LRK53_RS05495	0.78	-0.4
1,281,889	-		LRK53_RS05495	0.79	-0.1
1,281,889	-		LRK53_RS05495	0.79	-1.0
1,281,889	-		LRK53_RS05495	0.79	-0.7
1,281,889	-		LRK53_RS05495	0.79	-2.5
1,281,889	-		LRK53_RS05495	0.79	-0.7
1,281,912	+		LRK53_RS05495	0.80	+0.9
1,281,912	+		LRK53_RS05495	0.80	-0.1
1,281,912	+		LRK53_RS05495	0.80	+0.3
1,281,913	-		LRK53_RS05495	0.80	-1.1
1,281,913	-		LRK53_RS05495	0.80	+0.9
1,281,913	-		LRK53_RS05495	0.80	-0.5
1,281,913	-		LRK53_RS05495	0.80	-0.1
1,281,913	-		LRK53_RS05495	0.80	-1.4
1,281,913	-		LRK53_RS05495	0.80	-3.5
1,281,913	-		LRK53_RS05495	0.80	-2.3
1,281,951	+		LRK53_RS05495	0.82	-0.1
1,281,951	+		LRK53_RS05495	0.82	+0.5
1,281,951	+		LRK53_RS05495	0.82	+0.9
1,281,951	+		LRK53_RS05495	0.82	-0.4
1,281,951	+		LRK53_RS05495	0.82	-1.9
1,281,951	+		LRK53_RS05495	0.82	-0.7
1,281,951	+		LRK53_RS05495	0.82	-1.4
1,281,951	+		LRK53_RS05495	0.82	-1.7
1,281,951	+		LRK53_RS05495	0.82	-1.9
1,281,951	+		LRK53_RS05495	0.82	+0.9
1,281,951	+		LRK53_RS05495	0.82	+0.3
1,281,951	+		LRK53_RS05495	0.82	-0.1
1,281,951	+		LRK53_RS05495	0.82	+1.3
1,281,951	+		LRK53_RS05495	0.82	+1.9
1,281,951	+		LRK53_RS05495	0.82	-1.9
1,281,951	+		LRK53_RS05495	0.82	+0.5
1,281,951	+		LRK53_RS05495	0.82	-0.1
1,281,951	+		LRK53_RS05495	0.82	-0.9
1,281,951	+		LRK53_RS05495	0.82	-0.4
1,281,952	-		LRK53_RS05495	0.82	-1.1
1,281,952	-		LRK53_RS05495	0.82	+0.9
1,281,952	-		LRK53_RS05495	0.82	-0.4
1,281,952	-		LRK53_RS05495	0.82	-0.4
1,281,952	-		LRK53_RS05495	0.82	-1.4
1,281,952	-		LRK53_RS05495	0.82	-1.2
1,281,952	-		LRK53_RS05495	0.82	+0.7
1,281,952	-		LRK53_RS05495	0.82	-0.5
1,281,952	-		LRK53_RS05495	0.82	-0.7
1,281,952	-		LRK53_RS05495	0.82	-2.1
1,281,952	-		LRK53_RS05495	0.82	-0.7
1,281,952	-		LRK53_RS05495	0.82	-0.7
1,281,952	-		LRK53_RS05495	0.82	-0.4
1,281,952	-		LRK53_RS05495	0.82	-0.4
1,281,952	-		LRK53_RS05495	0.82	-1.1
1,281,952	-		LRK53_RS05495	0.82	-3.2
1,281,952	-		LRK53_RS05495	0.82	-0.1
1,281,952	-		LRK53_RS05495	0.82	-0.8
1,282,019	+		LRK53_RS05495	0.85	-1.1
1,282,019	+		LRK53_RS05495	0.85	-0.7
1,282,068	+		LRK53_RS05495	0.87	-1.7
1,282,068	+		LRK53_RS05495	0.87	+0.3
1,282,068	+		LRK53_RS05495	0.87	-2.0
1,282,068	+		LRK53_RS05495	0.87	-1.4
1,282,069	-		LRK53_RS05495	0.87	-0.7
1,282,069	-		LRK53_RS05495	0.87	-1.1
1,282,069	-		LRK53_RS05495	0.87	+0.9
1,282,069	-		LRK53_RS05495	0.87	-1.4
1,282,069	-		LRK53_RS05495	0.87	+0.3
1,282,069	-		LRK53_RS05495	0.87	+0.9
1,282,185	+				+0.9
1,282,185	+				+0.9
1,282,185	+				-1.7
1,282,185	+				+0.5
1,282,185	+				-2.0
1,282,185	+				-0.1
1,282,185	+				-0.7
1,282,185	+				-0.8
1,282,185	+				-0.3
1,282,185	+				-0.4
1,282,185	+				+0.9
1,282,186	-				+0.3
1,282,186	-				-1.1
1,282,186	-				-0.3
1,282,186	-				-0.1
1,282,186	-				+0.9
1,282,186	-				-0.8
1,282,186	-				+0.6
1,282,186	-				-1.2
1,282,186	-				-0.7
1,282,186	-				-1.2
1,282,186	-				-0.7
1,282,186	-				-1.1
1,282,186	-				-2.4
1,282,186	-				-1.9
1,282,186	-				-1.4
1,282,186	-				+1.9
1,282,242	+				+0.9
1,282,242	+				-1.1
1,282,242	+				+1.9
1,282,242	+				-0.7
1,282,242	+				-1.9
1,282,242	+				-1.9
1,282,242	+				-1.5
1,282,243	-				-1.1
1,282,243	-				-0.3
1,282,243	-				+0.3
1,282,243	-				-0.7
1,282,243	-				-0.2
1,282,243	-				-1.0
1,282,243	-				-0.3
1,282,243	-				-0.8
1,282,243	-				-0.1
1,282,243	-				-0.7
1,282,278	+				+0.0
1,282,278	+				+0.1
1,282,278	+				-0.1
1,282,278	+				+2.5
1,282,278	+				-1.1
1,282,278	+				+0.2
1,282,278	+				-0.7
1,282,278	+				-0.1
1,282,278	+				-0.1
1,282,278	+				-0.4
1,282,279	-				-2.1
1,282,279	-				-1.4
1,282,279	-				-0.9
1,282,279	-				-1.0
1,282,279	-				-0.1
1,282,279	-				+0.9
1,282,279	-				-0.1
1,282,335	+				-0.9
1,282,353	+				+0.2
1,282,353	+				-0.7
1,282,353	+				+0.9
1,282,353	+				+0.1
1,282,353	+				+1.9
1,282,353	+				-2.3
1,282,353	+				+0.9
1,282,353	+				-0.1
1,282,353	+				-0.7
1,282,353	+				-0.1
1,282,353	+				-0.2
1,282,353	+				-1.7
1,282,353	+				-0.7
1,282,353	+				-2.8
1,282,353	+				-1.1
1,282,353	+				-1.2
1,282,353	+				+0.9
1,282,353	+				+0.3
1,282,354	-				-1.1
1,282,354	-				-0.8
1,282,354	-				-0.7
1,282,354	-				+0.3
1,282,354	-				-0.6
1,282,354	-				-0.2
1,282,354	-				-0.1
1,282,354	-				+0.3
1,282,354	-				-0.7
1,282,354	-				+0.9
1,282,354	-				+0.9
1,282,407	+				+0.9
1,282,407	+				-0.1
1,282,408	-				+0.3
1,282,417	-				+0.5
1,282,417	-				+0.1
1,282,417	-				-1.1
1,282,596	-				-0.1
1,282,652	+				-0.7
1,282,652	+				+0.4
1,282,653	-				-1.7
1,282,929	+		LRK53_RS05500	0.20	+0.9
1,282,929	+		LRK53_RS05500	0.20	-1.4
1,282,929	+		LRK53_RS05500	0.20	-0.1
1,282,929	+		LRK53_RS05500	0.20	-0.9
1,282,930	-		LRK53_RS05500	0.20	-0.5
1,282,930	-		LRK53_RS05500	0.20	-0.4
1,282,930	-		LRK53_RS05500	0.20	-1.4
1,282,930	-		LRK53_RS05500	0.20	-1.5
1,282,930	-		LRK53_RS05500	0.20	+0.1
1,283,130	+		LRK53_RS05500	0.36	-1.1
1,283,130	+		LRK53_RS05500	0.36	-2.5
1,283,130	+		LRK53_RS05500	0.36	-1.4
1,283,130	+		LRK53_RS05500	0.36	-0.7
1,283,130	+		LRK53_RS05500	0.36	+0.5
1,283,130	+		LRK53_RS05500	0.36	-1.4
1,283,130	+		LRK53_RS05500	0.36	+0.5
1,283,130	+		LRK53_RS05500	0.36	-1.1
1,283,131	-		LRK53_RS05500	0.36	+0.3
1,283,131	-		LRK53_RS05500	0.36	+0.9
1,283,131	-		LRK53_RS05500	0.36	-1.5
1,283,131	-		LRK53_RS05500	0.36	-2.9
1,283,131	-		LRK53_RS05500	0.36	-0.4
1,283,193	+		LRK53_RS05500	0.41	+0.3
1,283,193	+		LRK53_RS05500	0.41	+0.5
1,283,193	+		LRK53_RS05500	0.41	-0.7
1,283,193	+		LRK53_RS05500	0.41	-1.9
1,283,193	+		LRK53_RS05500	0.41	-0.8
1,283,193	+		LRK53_RS05500	0.41	-0.6
1,283,193	+		LRK53_RS05500	0.41	-0.1
1,283,193	+		LRK53_RS05500	0.41	-0.1
1,283,193	+		LRK53_RS05500	0.41	-0.3
1,283,193	+		LRK53_RS05500	0.41	-1.9
1,283,194	-		LRK53_RS05500	0.41	+0.5
1,283,194	-		LRK53_RS05500	0.41	-1.7
1,283,194	-		LRK53_RS05500	0.41	-0.6
1,283,194	-		LRK53_RS05500	0.41	-1.4
1,283,194	-		LRK53_RS05500	0.41	+0.9
1,283,194	-		LRK53_RS05500	0.41	-0.2
1,283,194	-		LRK53_RS05500	0.41	-1.2
1,283,194	-		LRK53_RS05500	0.41	+0.2
1,283,194	-		LRK53_RS05500	0.41	-0.5
1,283,194	-		LRK53_RS05500	0.41	-2.8
1,283,194	-		LRK53_RS05500	0.41	-0.1
1,283,194	-		LRK53_RS05500	0.41	-1.7
1,283,194	-		LRK53_RS05500	0.41	-0.5
1,283,582	+		LRK53_RS05500	0.71	-0.7
1,283,582	+		LRK53_RS05500	0.71	-0.5
1,283,582	+		LRK53_RS05500	0.71	-0.1
1,283,582	+		LRK53_RS05500	0.71	-0.5
1,283,582	+		LRK53_RS05500	0.71	+0.3
1,283,582	+		LRK53_RS05500	0.71	-0.5
1,283,582	+		LRK53_RS05500	0.71	-0.1
1,283,583	-		LRK53_RS05500	0.71	-0.7
1,283,583	-		LRK53_RS05500	0.71	-2.7
1,283,583	-		LRK53_RS05500	0.71	-2.2
1,283,583	-		LRK53_RS05500	0.71	+0.9
1,283,778	+		LRK53_RS05500	0.87	+1.7
1,283,778	+		LRK53_RS05500	0.87	-1.5
1,283,778	+		LRK53_RS05500	0.87	-1.5
1,283,778	+		LRK53_RS05500	0.87	-1.1
1,283,778	+		LRK53_RS05500	0.87	+0.0
1,283,778	+		LRK53_RS05500	0.87	-1.1
1,283,778	+		LRK53_RS05500	0.87	-1.2
1,283,778	+		LRK53_RS05500	0.87	-1.7
1,283,778	+		LRK53_RS05500	0.87	+1.9
1,283,778	+		LRK53_RS05500	0.87	-1.2
1,283,778	+		LRK53_RS05500	0.87	+0.3
1,283,778	+		LRK53_RS05500	0.87	-0.1
1,283,778	+		LRK53_RS05500	0.87	-1.1
1,283,778	+		LRK53_RS05500	0.87	+0.5
1,283,778	+		LRK53_RS05500	0.87	-0.1
1,283,778	+		LRK53_RS05500	0.87	-1.4
1,283,778	+		LRK53_RS05500	0.87	-2.6
1,283,778	+		LRK53_RS05500	0.87	-1.6
1,283,778	+		LRK53_RS05500	0.87	+0.9
1,283,778	+		LRK53_RS05500	0.87	-0.7
1,283,778	+		LRK53_RS05500	0.87	-2.1
1,283,778	+		LRK53_RS05500	0.87	-1.9
1,283,778	+		LRK53_RS05500	0.87	-0.3
1,283,778	+		LRK53_RS05500	0.87	-1.2
1,283,778	+		LRK53_RS05500	0.87	-1.3
1,283,778	+		LRK53_RS05500	0.87	-2.8
1,283,778	+		LRK53_RS05500	0.87	-1.4
1,283,778	+		LRK53_RS05500	0.87	-0.8
1,283,778	+		LRK53_RS05500	0.87	-0.9
1,283,778	+		LRK53_RS05500	0.87	-1.7
1,283,778	+		LRK53_RS05500	0.87	-0.8
1,283,778	+		LRK53_RS05500	0.87	-1.1
1,283,778	+		LRK53_RS05500	0.87	-2.5
1,283,778	+		LRK53_RS05500	0.87	-0.4
1,283,778	+		LRK53_RS05500	0.87	-2.2
1,283,778	+		LRK53_RS05500	0.87	-0.7
1,283,778	+		LRK53_RS05500	0.87	-2.7
1,283,779	-		LRK53_RS05500	0.87	-0.9
1,283,779	-		LRK53_RS05500	0.87	+0.3
1,283,779	-		LRK53_RS05500	0.87	-0.6
1,283,779	-		LRK53_RS05500	0.87	-0.4
1,283,779	-		LRK53_RS05500	0.87	-1.3
1,283,779	-		LRK53_RS05500	0.87	+0.3
1,283,779	-		LRK53_RS05500	0.87	-0.4
1,283,779	-		LRK53_RS05500	0.87	-1.2
1,283,779	-		LRK53_RS05500	0.87	-0.7
1,283,779	-		LRK53_RS05500	0.87	+0.0
1,283,779	-		LRK53_RS05500	0.87	-2.1
1,283,779	-		LRK53_RS05500	0.87	-1.5
1,283,779	-		LRK53_RS05500	0.87	-0.1
1,283,779	-		LRK53_RS05500	0.87	-2.3
1,283,779	-		LRK53_RS05500	0.87	+0.3
1,283,779	-		LRK53_RS05500	0.87	+0.2
1,283,779	-		LRK53_RS05500	0.87	-1.3
1,283,779	-		LRK53_RS05500	0.87	-0.4
1,283,779	-		LRK53_RS05500	0.87	-1.1
1,283,779	-		LRK53_RS05500	0.87	-1.1
1,283,779	-		LRK53_RS05500	0.87	-0.1
1,283,779	-		LRK53_RS05500	0.87	+0.3
1,283,779	-		LRK53_RS05500	0.87	-2.4
1,283,779	-		LRK53_RS05500	0.87	-1.1
1,283,779	-		LRK53_RS05500	0.87	-0.1
1,283,779	-		LRK53_RS05500	0.87	+0.9
1,283,779	-		LRK53_RS05500	0.87	-1.7
1,283,779	-		LRK53_RS05500	0.87	-0.7
1,283,784	+		LRK53_RS05500	0.87	-0.2
1,283,784	+		LRK53_RS05500	0.87	-2.3
1,283,784	+		LRK53_RS05500	0.87	-1.1
1,283,784	+		LRK53_RS05500	0.87	-0.7
1,283,784	+		LRK53_RS05500	0.87	-0.6
1,283,784	+		LRK53_RS05500	0.87	-1.2
1,283,784	+		LRK53_RS05500	0.87	-0.6
1,283,785	-		LRK53_RS05500	0.87	-1.4
1,283,785	-		LRK53_RS05500	0.87	+0.1
1,283,785	-		LRK53_RS05500	0.87	-1.1
1,283,785	-		LRK53_RS05500	0.87	-0.7
1,283,785	-		LRK53_RS05500	0.87	-0.6
1,283,785	-		LRK53_RS05500	0.87	-2.2
1,283,785	-		LRK53_RS05500	0.87	-0.6
1,283,785	-		LRK53_RS05500	0.87	-0.4
1,283,785	-		LRK53_RS05500	0.87	-1.6
1,284,154	+				+0.3
1,284,154	+				-3.1
1,284,154	+				-1.4
1,284,154	+				-1.9
1,284,154	+				-2.2
1,284,155	-				-3.1
1,284,178	+				-1.4
1,284,178	+				+0.9
1,284,178	+				-2.0
1,284,178	+				-2.1
1,284,178	+				+0.3
1,284,178	+				-1.7
1,284,178	+				-0.1
1,284,178	+				+0.2
1,284,178	+				-0.7
1,284,178	+				-1.1
1,284,178	+				-0.6
1,284,178	+				-0.7
1,284,178	+				-0.1
1,284,179	-				+0.2
1,284,179	-				-0.4
1,284,179	-				-0.4
1,284,179	-				-0.8
1,284,179	-				-1.5
1,284,179	-				-1.1
1,284,179	-				+0.9
1,284,179	-				-1.1
1,284,179	-				-1.2
1,284,179	-				-0.7
1,284,307	+		LRK53_RS05505	0.25	-1.3
1,284,307	+		LRK53_RS05505	0.25	-3.0
1,284,308	-		LRK53_RS05505	0.25	-1.8
1,284,308	-		LRK53_RS05505	0.25	-1.1
1,284,308	-		LRK53_RS05505	0.25	-1.2
1,284,308	-		LRK53_RS05505	0.25	-0.4
1,284,308	-		LRK53_RS05505	0.25	-1.7
1,284,535	+		LRK53_RS05505	0.57	+0.9
1,284,848	+				-1.7
1,284,848	+				+0.9
1,284,848	+				-2.2
1,284,849	-				+0.2
1,284,849	-				-1.4
1,284,849	-				+2.9
1,284,849	-				+2.5
1,284,855	+				-1.1
1,284,855	+				+0.1
1,284,856	-				-0.1
1,284,856	-				+0.7
1,284,928	-				-0.7