Strain Fitness in Escherichia coli ECRC98 around JDDGAC_25630

Experiment: WM_T2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_T2
4,894,063	+				+0.7
4,894,129	+				+2.2
4,894,129	+				+3.1
4,894,129	+				+2.4
4,894,129	+				-2.4
4,894,129	+				+2.0
4,894,129	+				+1.0
4,894,130	-				+0.9
4,894,130	-				+2.0
4,894,130	-				+0.1
4,894,130	-				+0.7
4,894,130	-				+0.9
4,894,132	-				+0.3
4,894,207	+		JDDGAC_25620	0.23	+0.3
4,894,208	-		JDDGAC_25620	0.23	+0.6
4,894,234	-		JDDGAC_25620	0.31	-0.7
4,894,234	-		JDDGAC_25620	0.31	+2.2
4,894,236	+		JDDGAC_25620	0.32	+0.5
4,894,251	+		JDDGAC_25620	0.37	+1.7
4,894,270	-		JDDGAC_25620	0.43	-0.0
4,894,295	+		JDDGAC_25620	0.50	+2.0
4,894,311	+		JDDGAC_25620	0.55	+1.1
4,894,381	-		JDDGAC_25620	0.77	-0.7
4,894,436	-				-1.7
4,894,479	-				+2.9
4,894,518	-		JDDGAC_25625	0.10	-0.4
4,894,669	-		JDDGAC_25625	0.35	+1.5
4,894,675	-		JDDGAC_25625	0.36	+0.3
4,894,712	+		JDDGAC_25625	0.42	+1.0
4,894,726	+		JDDGAC_25625	0.45	+1.2
4,894,727	-		JDDGAC_25625	0.45	+0.2
4,894,800	+		JDDGAC_25625	0.57	+3.6
4,894,830	+		JDDGAC_25625	0.62	+2.1
4,894,830	+		JDDGAC_25625	0.62	+0.3
4,894,831	-		JDDGAC_25625	0.62	-0.1
4,894,831	-		JDDGAC_25625	0.62	+1.7
4,894,831	-		JDDGAC_25625	0.62	+0.0
4,894,831	-		JDDGAC_25625	0.62	+0.9
4,894,908	-		JDDGAC_25625	0.75	+1.1
4,894,908	-		JDDGAC_25625	0.75	+1.6
4,894,958	+		JDDGAC_25625	0.83	+2.2
4,894,958	+		JDDGAC_25625	0.83	+1.2
4,894,958	+		JDDGAC_25625	0.83	+1.3
4,894,958	+		JDDGAC_25625	0.83	+2.0
4,894,959	-		JDDGAC_25625	0.83	+2.1
4,894,963	-		JDDGAC_25625	0.84	-1.3
4,895,039	+				+1.4
4,895,065	+				+0.8
4,895,065	+				+1.5
4,895,118	-				+1.5
4,895,126	-				+1.6
4,895,142	-				+0.1
4,895,142	-				-2.1
4,895,149	-				+0.7
4,895,149	-				-0.4
4,895,174	-				+1.9
4,895,291	+				+2.4
4,895,291	+				-1.0
4,895,315	+		JDDGAC_25630	0.10	+0.1
4,895,315	+		JDDGAC_25630	0.10	+1.3
4,895,315	+		JDDGAC_25630	0.10	+1.0
4,895,315	+		JDDGAC_25630	0.10	+1.1
4,895,315	+		JDDGAC_25630	0.10	+1.1
4,895,316	-		JDDGAC_25630	0.10	+0.2
4,895,316	-		JDDGAC_25630	0.10	+3.3
4,895,365	+		JDDGAC_25630	0.12	+0.1
4,895,365	+		JDDGAC_25630	0.12	+3.4
4,895,365	+		JDDGAC_25630	0.12	+1.1
4,895,365	+		JDDGAC_25630	0.12	+1.6
4,895,366	-		JDDGAC_25630	0.12	+1.0
4,895,387	+		JDDGAC_25630	0.13	+1.2
4,895,388	-		JDDGAC_25630	0.13	+1.3
4,895,389	+		JDDGAC_25630	0.13	+0.9
4,895,389	+		JDDGAC_25630	0.13	+1.7
4,895,389	+		JDDGAC_25630	0.13	+0.3
4,895,390	-		JDDGAC_25630	0.13	+1.3
4,895,390	-		JDDGAC_25630	0.13	-1.5
4,895,390	-		JDDGAC_25630	0.13	+2.8
4,895,440	+		JDDGAC_25630	0.15	+2.3
4,895,440	+		JDDGAC_25630	0.15	+1.8
4,895,543	-		JDDGAC_25630	0.20	+1.7
4,895,549	-		JDDGAC_25630	0.20	+3.4
4,895,571	-		JDDGAC_25630	0.21	+2.6
4,895,571	-		JDDGAC_25630	0.21	+2.5
4,895,596	+		JDDGAC_25630	0.22	-1.0
4,895,596	+		JDDGAC_25630	0.22	+1.1
4,895,597	-		JDDGAC_25630	0.22	-0.2
4,895,597	-		JDDGAC_25630	0.22	+2.1
4,895,617	+		JDDGAC_25630	0.23	+0.5
4,895,637	+		JDDGAC_25630	0.23	+1.4
4,895,651	+		JDDGAC_25630	0.24	+0.5
4,895,652	-		JDDGAC_25630	0.24	+1.8
4,895,704	+		JDDGAC_25630	0.26	+1.9
4,895,737	+		JDDGAC_25630	0.27	+3.1
4,895,741	+		JDDGAC_25630	0.28	+1.7
4,895,741	+		JDDGAC_25630	0.28	-3.5
4,895,741	+		JDDGAC_25630	0.28	-0.9
4,895,741	+		JDDGAC_25630	0.28	+1.9
4,895,742	-		JDDGAC_25630	0.28	+0.5
4,895,742	-		JDDGAC_25630	0.28	+3.0
4,895,744	+		JDDGAC_25630	0.28	+2.2
4,895,744	+		JDDGAC_25630	0.28	+2.2
4,895,791	+		JDDGAC_25630	0.30	+1.2
4,895,887	+		JDDGAC_25630	0.33	+1.1
4,895,887	+		JDDGAC_25630	0.33	+0.6
4,895,888	-		JDDGAC_25630	0.33	+0.7
4,895,889	+		JDDGAC_25630	0.34	-1.6
4,895,890	-		JDDGAC_25630	0.34	-2.0
4,895,898	+		JDDGAC_25630	0.34	-0.8
4,895,899	-		JDDGAC_25630	0.34	+1.7
4,895,899	-		JDDGAC_25630	0.34	+1.2
4,895,899	-		JDDGAC_25630	0.34	+0.9
4,895,908	+		JDDGAC_25630	0.34	+0.3
4,895,909	-		JDDGAC_25630	0.34	-1.8
4,895,933	+		JDDGAC_25630	0.35	+4.1
4,895,933	+		JDDGAC_25630	0.35	+1.9
4,895,933	+		JDDGAC_25630	0.35	+1.9
4,895,933	+		JDDGAC_25630	0.35	+1.1
4,895,973	-		JDDGAC_25630	0.37	+2.1
4,895,974	+		JDDGAC_25630	0.37	-0.8
4,895,974	+		JDDGAC_25630	0.37	+2.7
4,895,974	+		JDDGAC_25630	0.37	+1.0
4,895,974	+		JDDGAC_25630	0.37	+0.7
4,895,974	+		JDDGAC_25630	0.37	+1.1
4,895,987	+		JDDGAC_25630	0.38	+2.4
4,895,988	-		JDDGAC_25630	0.38	+2.8
4,896,029	+		JDDGAC_25630	0.39	+1.2
4,896,029	+		JDDGAC_25630	0.39	+2.2
4,896,079	+		JDDGAC_25630	0.41	+3.2
4,896,130	+		JDDGAC_25630	0.43	+1.8
4,896,151	+		JDDGAC_25630	0.44	+2.8
4,896,151	+		JDDGAC_25630	0.44	-0.8
4,896,151	+		JDDGAC_25630	0.44	-0.1
4,896,152	-		JDDGAC_25630	0.44	+1.6
4,896,152	-		JDDGAC_25630	0.44	+2.4
4,896,155	+		JDDGAC_25630	0.44	+0.1
4,896,155	+		JDDGAC_25630	0.44	+1.5
4,896,155	+		JDDGAC_25630	0.44	+1.3
4,896,156	-		JDDGAC_25630	0.44	+2.5
4,896,156	-		JDDGAC_25630	0.44	+0.7
4,896,156	-		JDDGAC_25630	0.44	+0.6
4,896,161	+		JDDGAC_25630	0.45	-0.4
4,896,161	+		JDDGAC_25630	0.45	+0.9
4,896,161	+		JDDGAC_25630	0.45	+1.6
4,896,162	-		JDDGAC_25630	0.45	-0.1
4,896,162	-		JDDGAC_25630	0.45	+0.2
4,896,162	-		JDDGAC_25630	0.45	+1.2
4,896,178	+		JDDGAC_25630	0.45	+0.6
4,896,239	+		JDDGAC_25630	0.48	+2.1
4,896,240	-		JDDGAC_25630	0.48	+3.6
4,896,240	-		JDDGAC_25630	0.48	-1.6
4,896,396	-		JDDGAC_25630	0.54	+1.2
4,896,490	+		JDDGAC_25630	0.58	-0.5
4,896,491	-		JDDGAC_25630	0.58	+2.8
4,896,500	+		JDDGAC_25630	0.58	+1.2
4,896,532	+		JDDGAC_25630	0.60	+2.9
4,896,533	-		JDDGAC_25630	0.60	+0.9
4,896,551	+		JDDGAC_25630	0.60	+1.3
4,896,551	+		JDDGAC_25630	0.60	+1.5
4,896,552	-		JDDGAC_25630	0.60	+1.8
4,896,552	-		JDDGAC_25630	0.60	+1.0
4,896,552	-		JDDGAC_25630	0.60	+1.1
4,896,605	+		JDDGAC_25630	0.62	+2.2
4,896,622	+		JDDGAC_25630	0.63	-1.2
4,896,651	-		JDDGAC_25630	0.64	+0.2
4,896,693	-		JDDGAC_25630	0.66	+1.0
4,896,693	-		JDDGAC_25630	0.66	-1.0
4,896,760	+		JDDGAC_25630	0.69	+0.1
4,896,764	+		JDDGAC_25630	0.69	+3.6
4,896,764	+		JDDGAC_25630	0.69	+1.8
4,896,764	+		JDDGAC_25630	0.69	-0.2
4,896,765	-		JDDGAC_25630	0.69	-0.1
4,896,765	-		JDDGAC_25630	0.69	+1.0
4,896,765	-		JDDGAC_25630	0.69	+1.6
4,896,839	+		JDDGAC_25630	0.72	+2.9
4,896,841	+		JDDGAC_25630	0.72	+0.7
4,896,841	+		JDDGAC_25630	0.72	+1.7
4,896,842	-		JDDGAC_25630	0.72	+1.1
4,896,842	-		JDDGAC_25630	0.72	+1.1
4,896,842	-		JDDGAC_25630	0.72	+1.4
4,896,842	-		JDDGAC_25630	0.72	+0.6
4,896,877	+		JDDGAC_25630	0.74	-1.3
4,896,878	-		JDDGAC_25630	0.74	+2.3
4,896,878	-		JDDGAC_25630	0.74	+1.1
4,896,897	+		JDDGAC_25630	0.74	+1.8
4,896,897	+		JDDGAC_25630	0.74	+2.2
4,896,898	-		JDDGAC_25630	0.74	+1.9
4,896,898	-		JDDGAC_25630	0.74	-2.0
4,896,898	-		JDDGAC_25630	0.74	+4.0
4,896,898	-		JDDGAC_25630	0.74	-2.8
4,896,909	-		JDDGAC_25630	0.75	+1.0
4,896,954	+		JDDGAC_25630	0.77	+1.0
4,896,967	+		JDDGAC_25630	0.77	+2.6
4,897,107	+		JDDGAC_25630	0.83	+2.2
4,897,108	-		JDDGAC_25630	0.83	+0.7
4,897,209	+		JDDGAC_25630	0.87	+7.1
4,897,292	-				-1.8
4,897,292	-				-1.8
4,897,342	+				+1.0
4,897,379	+				-0.0
4,897,380	-				-0.5
4,897,380	-				+0.7
4,897,414	-				-0.4
4,897,433	-				+1.1
4,897,455	+				+0.2
4,897,513	+				+2.0
4,897,514	-				+1.7
4,897,537	+				+1.1
4,897,537	+				-1.3
4,897,538	-				+1.7
4,897,538	-				+1.7
4,897,538	-				-0.5
4,897,538	-				+2.1
4,897,606	-		JDDGAC_25635	0.16	+1.1
4,897,618	+		JDDGAC_25635	0.19	+0.5
4,897,619	-		JDDGAC_25635	0.19	+0.3
4,897,639	-		JDDGAC_25635	0.23	-0.2
4,897,773	-		JDDGAC_25635	0.52	+1.8
4,897,773	-		JDDGAC_25635	0.52	+1.4
4,897,795	+		JDDGAC_25635	0.57	+1.2
4,897,796	-		JDDGAC_25635	0.57	+0.2
4,897,829	+		JDDGAC_25635	0.64	-0.5
4,897,870	+		JDDGAC_25635	0.73	-1.8
4,897,962	+				+1.7
4,898,052	+		JDDGAC_25640	0.10	+1.3
4,898,052	+		JDDGAC_25640	0.10	+0.4
4,898,053	-		JDDGAC_25640	0.11	+1.0
4,898,077	-		JDDGAC_25640	0.15	+4.6
4,898,108	+		JDDGAC_25640	0.21	+2.5
4,898,109	-		JDDGAC_25640	0.21	-0.3
4,898,111	-		JDDGAC_25640	0.21	-1.2
4,898,195	+		JDDGAC_25640	0.37	+2.5
4,898,234	-		JDDGAC_25640	0.44	+2.4
4,898,234	-		JDDGAC_25640	0.44	+0.1
4,898,243	+		JDDGAC_25640	0.45	+2.4
4,898,256	-		JDDGAC_25640	0.48	+1.3
4,898,257	+		JDDGAC_25640	0.48	+2.2
4,898,257	+		JDDGAC_25640	0.48	+1.5
4,898,310	-		JDDGAC_25640	0.58	+0.7
4,898,334	+		JDDGAC_25640	0.62	+2.5
4,898,355	+		JDDGAC_25640	0.66	+1.7
4,898,356	-		JDDGAC_25640	0.66	+0.2
4,898,356	-		JDDGAC_25640	0.66	-2.6
4,898,436	+		JDDGAC_25640	0.81	+1.2
4,898,446	-		JDDGAC_25640	0.83	+2.0