Experiment: R2A with 3-octanone 15.9309 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS24105 and ABIE40_RS24110 are separated by 17 nucleotides ABIE40_RS24110 and ABIE40_RS24115 are separated by 0 nucleotides
ABIE40_RS24105: ABIE40_RS24105 - family 16 glycosylhydrolase, at 966,414 to 967,832
_RS24105
ABIE40_RS24110: ABIE40_RS24110 - amidase family protein, at 967,850 to 968,152
_RS24110
ABIE40_RS24115: ABIE40_RS24115 - amidase, at 968,153 to 969,196
_RS24115
Position (kb) 967
968
969 Strain fitness (log2 ratio) -2
-1
0
1
2 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.191 kb on + strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.192 kb on - strand, within ABIE40_RS24105 at 967.206 kb on + strand, within ABIE40_RS24105 at 967.206 kb on + strand, within ABIE40_RS24105 at 967.308 kb on + strand, within ABIE40_RS24105 at 967.315 kb on - strand, within ABIE40_RS24105 at 967.315 kb on - strand, within ABIE40_RS24105 at 967.359 kb on + strand, within ABIE40_RS24105 at 967.359 kb on + strand, within ABIE40_RS24105 at 967.359 kb on + strand, within ABIE40_RS24105 at 967.360 kb on - strand, within ABIE40_RS24105 at 967.366 kb on - strand, within ABIE40_RS24105 at 967.366 kb on - strand, within ABIE40_RS24105 at 967.565 kb on + strand, within ABIE40_RS24105 at 967.565 kb on + strand, within ABIE40_RS24105 at 967.565 kb on + strand, within ABIE40_RS24105 at 967.565 kb on + strand, within ABIE40_RS24105 at 967.584 kb on + strand, within ABIE40_RS24105 at 967.585 kb on - strand, within ABIE40_RS24105 at 967.653 kb on - strand, within ABIE40_RS24105 at 967.653 kb on - strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.680 kb on + strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.681 kb on - strand, within ABIE40_RS24105 at 967.764 kb on + strand at 967.765 kb on - strand at 967.766 kb on + strand at 967.824 kb on + strand at 967.824 kb on + strand at 967.824 kb on + strand at 967.824 kb on + strand at 967.824 kb on + strand at 967.824 kb on + strand at 967.825 kb on - strand at 967.825 kb on - strand at 967.825 kb on - strand at 967.825 kb on - strand at 967.825 kb on - strand at 967.825 kb on - strand at 967.830 kb on + strand at 967.830 kb on + strand at 967.830 kb on + strand at 967.830 kb on + strand at 967.830 kb on + strand at 967.830 kb on + strand at 967.993 kb on + strand, within ABIE40_RS24110 at 967.993 kb on + strand, within ABIE40_RS24110 at 967.994 kb on - strand, within ABIE40_RS24110 at 967.994 kb on - strand, within ABIE40_RS24110 at 968.181 kb on + strand at 968.181 kb on + strand at 968.182 kb on - strand at 968.182 kb on - strand at 968.238 kb on + strand at 968.239 kb on - strand at 968.239 kb on - strand at 968.239 kb on - strand at 968.519 kb on + strand, within ABIE40_RS24115 at 968.640 kb on + strand, within ABIE40_RS24115 at 968.640 kb on + strand, within ABIE40_RS24115 at 968.640 kb on + strand, within ABIE40_RS24115 at 968.641 kb on - strand, within ABIE40_RS24115 at 968.641 kb on - strand, within ABIE40_RS24115 at 968.641 kb on - strand, within ABIE40_RS24115 at 968.755 kb on + strand, within ABIE40_RS24115 at 968.802 kb on + strand, within ABIE40_RS24115 at 968.808 kb on + strand, within ABIE40_RS24115 at 968.808 kb on + strand, within ABIE40_RS24115 at 968.865 kb on - strand, within ABIE40_RS24115 at 968.865 kb on - strand, within ABIE40_RS24115
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with 3-octanone 15.9309 mM remove 967,191 + ABIE40_RS24105 0.55 -1.3 967,191 + ABIE40_RS24105 0.55 -0.5 967,191 + ABIE40_RS24105 0.55 +2.1 967,191 + ABIE40_RS24105 0.55 +0.1 967,191 + ABIE40_RS24105 0.55 +0.1 967,191 + ABIE40_RS24105 0.55 +0.5 967,192 - ABIE40_RS24105 0.55 -2.1 967,192 - ABIE40_RS24105 0.55 +0.3 967,192 - ABIE40_RS24105 0.55 +0.4 967,192 - ABIE40_RS24105 0.55 -0.1 967,192 - ABIE40_RS24105 0.55 +0.5 967,192 - ABIE40_RS24105 0.55 +0.5 967,206 + ABIE40_RS24105 0.56 -0.7 967,206 + ABIE40_RS24105 0.56 +2.1 967,308 + ABIE40_RS24105 0.63 -1.3 967,315 - ABIE40_RS24105 0.63 -0.9 967,315 - ABIE40_RS24105 0.63 +0.1 967,359 + ABIE40_RS24105 0.67 -0.6 967,359 + ABIE40_RS24105 0.67 +0.0 967,359 + ABIE40_RS24105 0.67 -2.3 967,360 - ABIE40_RS24105 0.67 +0.2 967,366 - ABIE40_RS24105 0.67 -0.9 967,366 - ABIE40_RS24105 0.67 +0.1 967,565 + ABIE40_RS24105 0.81 -1.1 967,565 + ABIE40_RS24105 0.81 -0.5 967,565 + ABIE40_RS24105 0.81 +0.9 967,565 + ABIE40_RS24105 0.81 +0.7 967,584 + ABIE40_RS24105 0.82 +0.3 967,585 - ABIE40_RS24105 0.83 -0.9 967,653 - ABIE40_RS24105 0.87 -0.1 967,653 - ABIE40_RS24105 0.87 -0.5 967,680 + ABIE40_RS24105 0.89 +0.0 967,680 + ABIE40_RS24105 0.89 -0.1 967,680 + ABIE40_RS24105 0.89 +1.1 967,680 + ABIE40_RS24105 0.89 -0.5 967,680 + ABIE40_RS24105 0.89 -0.5 967,680 + ABIE40_RS24105 0.89 -0.5 967,680 + ABIE40_RS24105 0.89 +0.1 967,680 + ABIE40_RS24105 0.89 +1.9 967,680 + ABIE40_RS24105 0.89 +1.6 967,680 + ABIE40_RS24105 0.89 +1.7 967,680 + ABIE40_RS24105 0.89 +1.4 967,680 + ABIE40_RS24105 0.89 +0.3 967,680 + ABIE40_RS24105 0.89 +1.1 967,681 - ABIE40_RS24105 0.89 +0.3 967,681 - ABIE40_RS24105 0.89 -0.9 967,681 - ABIE40_RS24105 0.89 +0.1 967,681 - ABIE40_RS24105 0.89 -2.2 967,681 - ABIE40_RS24105 0.89 +2.1 967,681 - ABIE40_RS24105 0.89 +0.1 967,681 - ABIE40_RS24105 0.89 -1.1 967,764 + -1.6 967,765 - +0.1 967,766 + -0.8 967,824 + -0.5 967,824 + -0.4 967,824 + +0.1 967,824 + +0.8 967,824 + +0.1 967,824 + +0.4 967,825 - +0.7 967,825 - -0.2 967,825 - +0.8 967,825 - -2.1 967,825 - -0.5 967,825 - -0.9 967,830 + +0.8 967,830 + +1.1 967,830 + -0.9 967,830 + +0.6 967,830 + +0.6 967,830 + -0.6 967,993 + ABIE40_RS24110 0.47 +0.5 967,993 + ABIE40_RS24110 0.47 -1.2 967,994 - ABIE40_RS24110 0.48 +0.1 967,994 - ABIE40_RS24110 0.48 -0.1 968,181 + +1.5 968,181 + -1.6 968,182 - +0.9 968,182 - -0.9 968,238 + +0.8 968,239 - -1.5 968,239 - -0.5 968,239 - +0.3 968,519 + ABIE40_RS24115 0.35 +0.7 968,640 + ABIE40_RS24115 0.47 +2.0 968,640 + ABIE40_RS24115 0.47 -1.1 968,640 + ABIE40_RS24115 0.47 +0.3 968,641 - ABIE40_RS24115 0.47 -0.6 968,641 - ABIE40_RS24115 0.47 +1.5 968,641 - ABIE40_RS24115 0.47 +1.5 968,755 + ABIE40_RS24115 0.58 -0.4 968,802 + ABIE40_RS24115 0.62 +0.6 968,808 + ABIE40_RS24115 0.63 +2.1 968,808 + ABIE40_RS24115 0.63 +0.5 968,865 - ABIE40_RS24115 0.68 -0.7 968,865 - ABIE40_RS24115 0.68 +0.5
Or see this region's nucleotide sequence