Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14250

Experiment: R2A with 3-octanone 15.9309 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 15.9309 mM
2,783,323	+		ABIE40_RS14240	0.31	-1.1
2,783,324	-		ABIE40_RS14240	0.31	-2.4
2,783,588	-		ABIE40_RS14240	0.69	+0.7
2,783,608	+		ABIE40_RS14240	0.72	-1.6
2,783,608	+		ABIE40_RS14240	0.72	-1.1
2,783,608	+		ABIE40_RS14240	0.72	-1.1
2,783,608	+		ABIE40_RS14240	0.72	-1.3
2,783,608	+		ABIE40_RS14240	0.72	-0.7
2,783,609	-		ABIE40_RS14240	0.72	-1.6
2,783,609	-		ABIE40_RS14240	0.72	-0.5
2,783,609	-		ABIE40_RS14240	0.72	-1.8
2,783,609	-		ABIE40_RS14240	0.72	+1.0
2,783,671	+		ABIE40_RS14240	0.81	-1.3
2,783,672	-		ABIE40_RS14240	0.81	-1.3
2,783,672	-		ABIE40_RS14240	0.81	-0.2
2,783,672	-		ABIE40_RS14240	0.81	-1.8
2,783,672	-		ABIE40_RS14240	0.81	+1.4
2,783,672	-		ABIE40_RS14240	0.81	-1.6
2,783,690	-		ABIE40_RS14240	0.84	-0.1
2,783,702	-		ABIE40_RS14240	0.85	-0.6
2,783,704	+		ABIE40_RS14240	0.86	-1.4
2,783,705	-		ABIE40_RS14240	0.86	+0.1
2,783,705	-		ABIE40_RS14240	0.86	-1.2
2,783,858	+		ABIE40_RS14245	0.33	+0.9
2,783,865	+		ABIE40_RS14245	0.36	-0.8
2,783,866	-		ABIE40_RS14245	0.37	-0.7
2,783,955	+		ABIE40_RS14245	0.81	-0.1
2,783,956	-		ABIE40_RS14245	0.82	-0.7
2,784,029	+				-0.2
2,784,029	+				-2.0
2,784,030	-				+1.0
2,784,030	-				-1.1
2,784,030	-				+0.3
2,784,030	-				+1.3
2,784,133	+				-1.5
2,784,364	+		ABIE40_RS14250	0.12	-0.9
2,784,364	+		ABIE40_RS14250	0.12	-1.7
2,784,364	+		ABIE40_RS14250	0.12	-0.4
2,784,364	+		ABIE40_RS14250	0.12	+0.9
2,784,365	-		ABIE40_RS14250	0.12	+0.1
2,784,365	-		ABIE40_RS14250	0.12	+2.4
2,784,365	-		ABIE40_RS14250	0.12	+0.9
2,784,365	-		ABIE40_RS14250	0.12	-1.5
2,784,365	-		ABIE40_RS14250	0.12	-0.1
2,784,365	-		ABIE40_RS14250	0.12	-3.2
2,784,365	-		ABIE40_RS14250	0.12	-1.0
2,784,365	-		ABIE40_RS14250	0.12	+2.4
2,784,365	-		ABIE40_RS14250	0.12	+0.9
2,784,365	-		ABIE40_RS14250	0.12	-3.1
2,784,365	-		ABIE40_RS14250	0.12	+0.3
2,784,365	-		ABIE40_RS14250	0.12	-0.6
2,784,365	-		ABIE40_RS14250	0.12	-0.5
2,784,365	-		ABIE40_RS14250	0.12	-0.6
2,784,370	+		ABIE40_RS14250	0.12	-0.1
2,784,371	-		ABIE40_RS14250	0.13	-0.2
2,784,372	+		ABIE40_RS14250	0.13	-2.6
2,784,372	+		ABIE40_RS14250	0.13	+0.2
2,784,372	+		ABIE40_RS14250	0.13	-0.9
2,784,372	+		ABIE40_RS14250	0.13	-0.7
2,784,373	-		ABIE40_RS14250	0.13	-1.1
2,784,373	-		ABIE40_RS14250	0.13	-0.6
2,784,373	-		ABIE40_RS14250	0.13	-1.4
2,784,373	-		ABIE40_RS14250	0.13	-1.1
2,784,373	-		ABIE40_RS14250	0.13	-0.8
2,784,373	-		ABIE40_RS14250	0.13	+0.5
2,784,373	-		ABIE40_RS14250	0.13	-0.6
2,784,373	-		ABIE40_RS14250	0.13	+0.7
2,784,373	-		ABIE40_RS14250	0.13	-0.3
2,784,427	+		ABIE40_RS14250	0.16	-0.7
2,784,427	+		ABIE40_RS14250	0.16	-0.9
2,784,428	-		ABIE40_RS14250	0.16	-0.9
2,784,428	-		ABIE40_RS14250	0.16	+0.1
2,784,428	-		ABIE40_RS14250	0.16	+0.1
2,784,428	-		ABIE40_RS14250	0.16	+0.8
2,784,542	-		ABIE40_RS14250	0.24	-0.5
2,784,580	+		ABIE40_RS14250	0.26	+1.9
2,784,580	+		ABIE40_RS14250	0.26	-0.2
2,784,581	-		ABIE40_RS14250	0.26	+0.0
2,784,581	-		ABIE40_RS14250	0.26	-2.4
2,784,581	-		ABIE40_RS14250	0.26	-1.4
2,784,581	-		ABIE40_RS14250	0.26	-0.6
2,784,582	+		ABIE40_RS14250	0.26	+0.0
2,784,582	+		ABIE40_RS14250	0.26	-0.7
2,784,582	+		ABIE40_RS14250	0.26	-0.9
2,784,582	+		ABIE40_RS14250	0.26	+0.1
2,784,582	+		ABIE40_RS14250	0.26	-2.1
2,784,583	-		ABIE40_RS14250	0.26	-1.1
2,784,583	-		ABIE40_RS14250	0.26	+2.1
2,784,583	-		ABIE40_RS14250	0.26	-0.4
2,784,583	-		ABIE40_RS14250	0.26	-0.9
2,784,583	-		ABIE40_RS14250	0.26	-0.2
2,784,583	-		ABIE40_RS14250	0.26	+0.9
2,784,892	+		ABIE40_RS14250	0.47	-0.4
2,784,892	+		ABIE40_RS14250	0.47	-2.5
2,784,893	-		ABIE40_RS14250	0.47	-0.9
2,784,893	-		ABIE40_RS14250	0.47	+0.0
2,784,905	-		ABIE40_RS14250	0.48	+2.2
2,784,905	-		ABIE40_RS14250	0.48	-1.9
2,784,959	-		ABIE40_RS14250	0.51	-1.5
2,784,959	-		ABIE40_RS14250	0.51	+0.7
2,784,959	-		ABIE40_RS14250	0.51	+0.6
2,784,959	-		ABIE40_RS14250	0.51	-0.8
2,784,990	-		ABIE40_RS14250	0.53	+0.3
2,785,141	+		ABIE40_RS14250	0.63	+0.3
2,785,141	+		ABIE40_RS14250	0.63	-0.5
2,785,142	-		ABIE40_RS14250	0.63	-0.1
2,785,142	-		ABIE40_RS14250	0.63	-1.4
2,785,142	-		ABIE40_RS14250	0.63	-0.3
2,785,142	-		ABIE40_RS14250	0.63	+0.5
2,785,142	-		ABIE40_RS14250	0.63	-1.3
2,785,142	-		ABIE40_RS14250	0.63	+0.9
2,785,261	+		ABIE40_RS14250	0.71	-1.6
2,785,262	-		ABIE40_RS14250	0.71	-1.1
2,785,262	-		ABIE40_RS14250	0.71	-0.3
2,785,492	+		ABIE40_RS14250	0.86	-0.6
2,785,493	-		ABIE40_RS14250	0.86	+0.3
2,785,496	+		ABIE40_RS14250	0.87	+0.0
2,785,496	+		ABIE40_RS14250	0.87	+2.9
2,785,496	+		ABIE40_RS14250	0.87	-0.8
2,785,496	+		ABIE40_RS14250	0.87	-0.9
2,785,496	+		ABIE40_RS14250	0.87	+0.6
2,785,496	+		ABIE40_RS14250	0.87	-0.4
2,785,497	-		ABIE40_RS14250	0.87	-1.2
2,785,497	-		ABIE40_RS14250	0.87	-2.3
2,785,497	-		ABIE40_RS14250	0.87	+1.9
2,785,497	-		ABIE40_RS14250	0.87	+0.5
2,785,497	-		ABIE40_RS14250	0.87	-0.3
2,785,497	-		ABIE40_RS14250	0.87	-0.4
2,785,497	-		ABIE40_RS14250	0.87	-0.8
2,785,531	+		ABIE40_RS14250	0.89	-0.5
2,785,531	+		ABIE40_RS14250	0.89	+0.2
2,785,531	+		ABIE40_RS14250	0.89	-1.3
2,785,543	+		ABIE40_RS14250	0.90	+0.6
2,785,543	+		ABIE40_RS14250	0.90	-2.1
2,785,544	-		ABIE40_RS14250	0.90	-2.5
2,785,545	+		ABIE40_RS14250	0.90	+1.9
2,785,615	+				-0.5
2,785,615	+				+0.9
2,785,616	-				-0.8
2,785,644	+				-0.2
2,785,644	+				-0.4
2,785,644	+				+1.2
2,785,644	+				+0.2
2,785,644	+				+0.1
2,785,645	-				-0.0
2,785,645	-				-0.2
2,785,645	-				+1.7
2,785,645	-				+0.6
2,785,645	-				+0.6
2,785,696	+				-0.8
2,785,697	-				-0.2
2,785,697	-				-0.1
2,785,697	-				+1.7
2,785,697	-				-1.1
2,785,697	-				-0.4
2,785,697	-				-0.0
2,785,703	+				+0.3
2,785,703	+				-0.1
2,785,703	+				-2.6
2,785,703	+				-2.3
2,785,704	-				+0.4
2,785,802	+				-0.4
2,785,802	+				-0.3
2,785,803	-				-1.0
2,785,835	-		ABIE40_RS14255	0.13	-1.1
2,785,870	+		ABIE40_RS14255	0.17	-0.1
2,785,870	+		ABIE40_RS14255	0.17	-2.0
2,785,870	+		ABIE40_RS14255	0.17	+2.6
2,785,879	+		ABIE40_RS14255	0.18	-3.2
2,785,879	+		ABIE40_RS14255	0.18	+0.7
2,786,123	-		ABIE40_RS14255	0.48	-0.0
2,786,123	-		ABIE40_RS14255	0.48	+0.9
2,786,254	+		ABIE40_RS14255	0.64	+1.2
2,786,254	+		ABIE40_RS14255	0.64	+1.5
2,786,254	+		ABIE40_RS14255	0.64	+0.4
2,786,310	+		ABIE40_RS14255	0.71	+0.1
2,786,310	+		ABIE40_RS14255	0.71	-1.6
2,786,311	-		ABIE40_RS14255	0.71	-0.4
2,786,311	-		ABIE40_RS14255	0.71	-2.2
2,786,311	-		ABIE40_RS14255	0.71	+0.8
2,786,311	-		ABIE40_RS14255	0.71	-1.8
2,786,384	+		ABIE40_RS14255	0.80	+1.1
2,786,384	+		ABIE40_RS14255	0.80	-0.3
2,786,390	-		ABIE40_RS14255	0.81	-0.6
2,786,440	+		ABIE40_RS14255	0.87	+0.6
2,786,531	-				+0.3
2,786,553	+				+0.2
2,786,553	+				+0.7
2,786,553	+				+0.3
2,786,553	+				+1.4
2,786,553	+				+0.5
2,786,553	+				+0.5
2,786,553	+				-0.3
2,786,553	+				+0.0
2,786,554	-				+3.3
2,786,554	-				-2.0
2,786,554	-				+0.1
2,786,554	-				-1.2
2,786,554	-				-2.4
2,786,554	-				+0.9
2,786,554	-				-2.3