Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS11570

Experiment: R2A with 3-octanone 10.6206 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 10.6206 mM
2,244,322	+		ABIE40_RS11565	0.35	+2.0
2,244,333	+		ABIE40_RS11565	0.36	-2.7
2,244,333	+		ABIE40_RS11565	0.36	-1.7
2,244,333	+		ABIE40_RS11565	0.36	+0.7
2,244,333	+		ABIE40_RS11565	0.36	-2.5
2,244,333	+		ABIE40_RS11565	0.36	+1.0
2,244,334	-		ABIE40_RS11565	0.37	-1.2
2,244,334	-		ABIE40_RS11565	0.37	+1.5
2,244,334	-		ABIE40_RS11565	0.37	+1.4
2,244,334	-		ABIE40_RS11565	0.37	-0.2
2,244,334	-		ABIE40_RS11565	0.37	-0.8
2,244,334	-		ABIE40_RS11565	0.37	-0.3
2,244,334	-		ABIE40_RS11565	0.37	-2.5
2,244,373	+		ABIE40_RS11565	0.42	+0.7
2,244,373	+		ABIE40_RS11565	0.42	-0.0
2,244,373	+		ABIE40_RS11565	0.42	+0.4
2,244,373	+		ABIE40_RS11565	0.42	-2.0
2,244,374	-		ABIE40_RS11565	0.42	+2.2
2,244,374	-		ABIE40_RS11565	0.42	+2.0
2,244,374	-		ABIE40_RS11565	0.42	-0.3
2,244,374	-		ABIE40_RS11565	0.42	-0.1
2,244,374	-		ABIE40_RS11565	0.42	+0.4
2,244,374	-		ABIE40_RS11565	0.42	-0.3
2,244,376	+		ABIE40_RS11565	0.42	-0.0
2,244,376	+		ABIE40_RS11565	0.42	-0.8
2,244,376	+		ABIE40_RS11565	0.42	-2.0
2,244,376	+		ABIE40_RS11565	0.42	+0.4
2,244,377	-		ABIE40_RS11565	0.42	-4.0
2,244,412	+		ABIE40_RS11565	0.47	-1.8
2,244,471	+		ABIE40_RS11565	0.54	-0.0
2,244,471	+		ABIE40_RS11565	0.54	-0.1
2,244,471	+		ABIE40_RS11565	0.54	+0.7
2,244,471	+		ABIE40_RS11565	0.54	-0.5
2,244,471	+		ABIE40_RS11565	0.54	+2.0
2,244,472	-		ABIE40_RS11565	0.54	+0.4
2,244,472	-		ABIE40_RS11565	0.54	+2.0
2,244,475	+		ABIE40_RS11565	0.55	-0.0
2,244,475	+		ABIE40_RS11565	0.55	-0.0
2,244,475	+		ABIE40_RS11565	0.55	+1.6
2,244,476	-		ABIE40_RS11565	0.55	-1.0
2,244,489	+		ABIE40_RS11565	0.56	+0.1
2,244,490	-		ABIE40_RS11565	0.57	-0.8
2,244,490	-		ABIE40_RS11565	0.57	-2.3
2,244,490	-		ABIE40_RS11565	0.57	+0.7
2,244,490	-		ABIE40_RS11565	0.57	-0.8
2,244,490	-		ABIE40_RS11565	0.57	+0.4
2,244,495	+		ABIE40_RS11565	0.57	-2.3
2,244,495	+		ABIE40_RS11565	0.57	-1.6
2,244,496	-		ABIE40_RS11565	0.57	-1.2
2,244,514	-		ABIE40_RS11565	0.60	+0.7
2,244,543	+		ABIE40_RS11565	0.63	+0.4
2,244,543	+		ABIE40_RS11565	0.63	-0.3
2,244,543	+		ABIE40_RS11565	0.63	-2.0
2,244,543	+		ABIE40_RS11565	0.63	-0.6
2,244,543	+		ABIE40_RS11565	0.63	-1.2
2,244,577	-		ABIE40_RS11565	0.68	-1.8
2,244,596	-		ABIE40_RS11565	0.70	-0.8
2,244,596	-		ABIE40_RS11565	0.70	-1.3
2,244,612	+		ABIE40_RS11565	0.72	+0.4
2,244,612	+		ABIE40_RS11565	0.72	-1.5
2,244,613	-		ABIE40_RS11565	0.72	-2.9
2,244,613	-		ABIE40_RS11565	0.72	+0.1
2,244,655	+		ABIE40_RS11565	0.78	+2.0
2,244,655	+		ABIE40_RS11565	0.78	-2.2
2,244,655	+		ABIE40_RS11565	0.78	-2.8
2,244,655	+		ABIE40_RS11565	0.78	-0.8
2,244,656	-		ABIE40_RS11565	0.78	+0.1
2,244,657	+		ABIE40_RS11565	0.78	-1.3
2,244,668	+		ABIE40_RS11565	0.79	+0.8
2,244,668	+		ABIE40_RS11565	0.79	-2.7
2,244,676	-		ABIE40_RS11565	0.80	-0.3
2,244,678	+		ABIE40_RS11565	0.81	+0.4
2,244,678	+		ABIE40_RS11565	0.81	-0.0
2,244,678	+		ABIE40_RS11565	0.81	-0.3
2,244,702	+		ABIE40_RS11565	0.84	-0.7
2,244,702	+		ABIE40_RS11565	0.84	-2.6
2,244,703	-		ABIE40_RS11565	0.84	-0.0
2,244,703	-		ABIE40_RS11565	0.84	-2.1
2,244,704	+		ABIE40_RS11565	0.84	+0.6
2,244,705	-		ABIE40_RS11565	0.84	+1.4
2,244,710	+		ABIE40_RS11565	0.85	+1.2
2,244,710	+		ABIE40_RS11565	0.85	-1.2
2,244,710	+		ABIE40_RS11565	0.85	-0.0
2,244,710	+		ABIE40_RS11565	0.85	-1.6
2,244,711	-		ABIE40_RS11565	0.85	+0.3
2,244,711	-		ABIE40_RS11565	0.85	+0.1
2,244,711	-		ABIE40_RS11565	0.85	+0.9
2,244,711	-		ABIE40_RS11565	0.85	-0.3
2,244,711	-		ABIE40_RS11565	0.85	-1.8
2,244,776	+				-1.5
2,244,849	+				-0.4
2,244,882	-				+0.8
2,244,886	-				+0.6
2,244,897	+				+0.1
2,244,930	+				-0.9
2,244,930	+				-0.9
2,244,930	+				+0.6
2,244,931	-				+0.2
2,244,931	-				-1.7
2,244,931	-				-0.6
2,244,931	-				-0.7
2,244,932	+				-0.5
2,244,932	+				-0.9
2,244,932	+				-0.6
2,244,932	+				-0.6
2,244,932	+				+0.8
2,244,933	-				-1.6
2,244,933	-				-0.8
2,244,948	-				-0.1
2,245,057	-				-0.0
2,245,063	+				-0.5
2,245,064	-				+1.1
2,245,064	-				+0.8
2,245,064	-				-0.0
2,245,064	-				-0.8
2,245,139	+				-0.5
2,245,139	+				+1.6
2,245,148	+				+1.0
2,245,150	+				-2.0
2,245,151	-				+0.3
2,245,177	+				-0.1
2,245,177	+				-0.4
2,245,177	+				-0.5
2,245,177	+				-0.3
2,245,177	+				-0.2
2,245,177	+				-0.3
2,245,177	+				-0.3
2,245,178	-				-1.4
2,245,178	-				-0.2
2,245,178	-				+1.0
2,245,178	-				-0.3
2,245,182	+				-0.4
2,245,182	+				+3.0
2,245,182	+				+1.2
2,245,182	+				+2.3
2,245,182	+				+0.0
2,245,182	+				-1.9
2,245,183	-				-1.5
2,245,183	-				+0.7
2,245,183	-				-2.1
2,245,183	-				-0.9
2,245,183	-				-2.4
2,245,184	+				+0.5
2,245,184	+				+0.2
2,245,184	+				+0.3
2,245,184	+				+0.1
2,245,184	+				+0.1
2,245,184	+				-0.1
2,245,184	+				-0.8
2,245,184	+				+0.5
2,245,184	+				-0.6
2,245,184	+				+1.5
2,245,184	+				+0.7
2,245,185	-				+0.2
2,245,185	-				-1.5
2,245,185	-				-0.6
2,245,185	-				+1.5
2,245,185	-				+2.6
2,245,185	-				-0.6
2,245,186	+				-0.6
2,245,187	-				-1.0
2,245,187	-				-2.9
2,245,187	-				-1.2
2,245,196	-				+0.8
2,245,221	+				+0.4
2,245,221	+				-1.1
2,245,221	+				+0.3
2,245,221	+				-0.7
2,245,221	+				-1.0
2,245,221	+				+0.1
2,245,221	+				+1.1
2,245,222	-				-0.4
2,245,222	-				-0.5
2,245,222	-				+3.6
2,245,222	-				-1.1
2,245,222	-				-0.2
2,245,222	-				-0.3
2,245,242	+				+2.0
2,245,242	+				+0.0
2,245,269	-				-2.0
2,245,280	+				+0.2
2,245,280	+				+0.9
2,245,280	+				-0.6
2,245,280	+				-0.8
2,245,280	+				-1.8
2,245,280	+				-0.4
2,245,280	+				+2.0
2,245,280	+				-1.6
2,245,280	+				+0.1
2,245,280	+				+0.4
2,245,280	+				-0.6
2,245,281	-				-0.4
2,245,281	-				-2.9
2,245,281	-				-1.6
2,245,281	-				-0.2
2,245,281	-				-1.0
2,245,281	-				-1.9
2,245,281	-				-0.3
2,245,281	-				+2.3
2,245,281	-				-0.7
2,245,281	-				-1.6
2,245,281	-				-1.0
2,245,282	+				-0.2
2,245,282	+				-0.1
2,245,282	+				-1.3
2,245,282	+				-1.3
2,245,282	+				+1.0
2,245,283	-				-0.0
2,245,283	-				+0.5
2,245,283	-				-0.2
2,245,283	-				-0.4
2,245,283	-				+0.8
2,245,283	-				+0.5
2,245,283	-				-0.8
2,245,283	-				+1.0
2,245,294	+				+0.4
2,245,306	+				-0.9
2,245,306	+				+0.8
2,245,306	+				-1.0
2,245,306	+				+0.2
2,245,307	-				-1.0
2,245,310	+				-0.8
2,245,310	+				-0.3
2,245,310	+				+0.5
2,245,310	+				+0.5
2,245,310	+				+0.8
2,245,310	+				-0.2
2,245,311	-				-1.5
2,245,311	-				+0.1
2,245,311	-				-1.0
2,245,311	-				-0.0
2,245,311	-				-0.8
2,245,311	-				+0.2
2,245,311	-				+0.5
2,245,435	+		ABIE40_RS11570	0.29	-0.1
2,245,436	-		ABIE40_RS11570	0.29	+1.0
2,245,436	-		ABIE40_RS11570	0.29	-1.0
2,245,436	-		ABIE40_RS11570	0.29	+0.0
2,245,571	+		ABIE40_RS11570	0.54	+0.5
2,245,571	+		ABIE40_RS11570	0.54	+0.1
2,245,571	+		ABIE40_RS11570	0.54	+0.2
2,245,571	+		ABIE40_RS11570	0.54	+0.4
2,245,571	+		ABIE40_RS11570	0.54	+2.0
2,245,571	+		ABIE40_RS11570	0.54	-1.7
2,245,620	+		ABIE40_RS11570	0.63	-0.3
2,245,683	-		ABIE40_RS11570	0.75	-0.3
2,245,792	+				+1.0
2,245,795	+				-1.9
2,245,795	+				-0.2
2,245,795	+				-0.5
2,245,795	+				-0.8
2,245,795	+				-0.0
2,245,796	-				+0.3
2,245,796	-				+0.7
2,245,796	-				+0.1
2,245,808	+				-3.0
2,245,809	+				-1.2
2,245,810	-				-2.4
2,245,810	-				+1.8
2,245,810	-				-2.2
2,245,811	+				-0.9
2,245,812	-				-0.1
2,245,829	+				-0.8
2,245,830	-				-0.8
2,245,830	-				-0.4
2,245,832	-				+0.3
2,245,832	-				+1.4
2,245,854	-				-0.2
2,245,854	-				-0.0
2,245,881	+				-0.5
2,245,882	-				+0.8
2,245,882	-				+0.8
2,245,882	-				+0.7
2,245,882	-				-0.3
2,246,798	-				-0.8
2,246,800	-				-1.1
2,246,800	-				-0.3
2,246,800	-				-0.7
2,246,804	-				-0.5