Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS16615

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
3,307,660	+				-1.4
3,307,660	+				-1.2
3,307,661	-				-1.2
3,307,661	-				-0.4
3,307,708	-				-0.8
3,307,708	-				-0.9
3,307,834	+		ABIE40_RS16610	0.13	-1.6
3,307,834	+		ABIE40_RS16610	0.13	-0.7
3,307,834	+		ABIE40_RS16610	0.13	-1.6
3,307,834	+		ABIE40_RS16610	0.13	-0.5
3,307,834	+		ABIE40_RS16610	0.13	-2.1
3,307,834	+		ABIE40_RS16610	0.13	-2.3
3,307,834	+		ABIE40_RS16610	0.13	+0.2
3,307,834	+		ABIE40_RS16610	0.13	+0.7
3,307,834	+		ABIE40_RS16610	0.13	-0.3
3,307,834	+		ABIE40_RS16610	0.13	+0.1
3,307,835	-		ABIE40_RS16610	0.13	-2.0
3,307,835	-		ABIE40_RS16610	0.13	-2.5
3,307,835	-		ABIE40_RS16610	0.13	-0.2
3,307,835	-		ABIE40_RS16610	0.13	+0.1
3,307,835	-		ABIE40_RS16610	0.13	+0.6
3,307,835	-		ABIE40_RS16610	0.13	-0.1
3,307,835	-		ABIE40_RS16610	0.13	-0.6
3,307,835	-		ABIE40_RS16610	0.13	-0.4
3,307,835	-		ABIE40_RS16610	0.13	-0.5
3,307,835	-		ABIE40_RS16610	0.13	-0.0
3,307,835	-		ABIE40_RS16610	0.13	-0.5
3,307,835	-		ABIE40_RS16610	0.13	+1.0
3,307,835	-		ABIE40_RS16610	0.13	-0.9
3,307,835	-		ABIE40_RS16610	0.13	+1.4
3,307,839	-		ABIE40_RS16610	0.14	+0.4
3,307,942	+		ABIE40_RS16610	0.27	-0.7
3,307,942	+		ABIE40_RS16610	0.27	-3.4
3,307,942	+		ABIE40_RS16610	0.27	-0.9
3,307,943	-		ABIE40_RS16610	0.27	-2.3
3,307,943	-		ABIE40_RS16610	0.27	+1.5
3,307,943	-		ABIE40_RS16610	0.27	-0.3
3,307,943	-		ABIE40_RS16610	0.27	+0.1
3,307,943	-		ABIE40_RS16610	0.27	-1.2
3,307,943	-		ABIE40_RS16610	0.27	-0.3
3,307,943	-		ABIE40_RS16610	0.27	-0.5
3,307,943	-		ABIE40_RS16610	0.27	+0.7
3,307,981	+		ABIE40_RS16610	0.32	-1.2
3,307,981	+		ABIE40_RS16610	0.32	+0.8
3,307,981	+		ABIE40_RS16610	0.32	+1.8
3,307,982	-		ABIE40_RS16610	0.33	-1.3
3,307,982	-		ABIE40_RS16610	0.33	+0.8
3,308,086	+		ABIE40_RS16610	0.46	+0.8
3,308,087	-		ABIE40_RS16610	0.46	+0.4
3,308,087	-		ABIE40_RS16610	0.46	+1.4
3,308,266	+		ABIE40_RS16610	0.70	-0.3
3,308,266	+		ABIE40_RS16610	0.70	-1.1
3,308,267	-		ABIE40_RS16610	0.70	+0.1
3,308,269	+		ABIE40_RS16610	0.71	-1.3
3,308,269	+		ABIE40_RS16610	0.71	-0.2
3,308,269	+		ABIE40_RS16610	0.71	+0.8
3,308,269	+		ABIE40_RS16610	0.71	-2.1
3,308,269	+		ABIE40_RS16610	0.71	-0.9
3,308,269	+		ABIE40_RS16610	0.71	-2.1
3,308,269	+		ABIE40_RS16610	0.71	-0.9
3,308,269	+		ABIE40_RS16610	0.71	-0.5
3,308,270	-		ABIE40_RS16610	0.71	+0.9
3,308,270	-		ABIE40_RS16610	0.71	+0.6
3,308,270	-		ABIE40_RS16610	0.71	-0.2
3,308,270	-		ABIE40_RS16610	0.71	-0.4
3,308,270	-		ABIE40_RS16610	0.71	-1.5
3,308,270	-		ABIE40_RS16610	0.71	-3.6
3,308,270	-		ABIE40_RS16610	0.71	-0.6
3,308,272	+		ABIE40_RS16610	0.71	+0.3
3,308,272	+		ABIE40_RS16610	0.71	-0.5
3,308,272	+		ABIE40_RS16610	0.71	+0.2
3,308,272	+		ABIE40_RS16610	0.71	-0.8
3,308,272	+		ABIE40_RS16610	0.71	+0.7
3,308,272	+		ABIE40_RS16610	0.71	+2.1
3,308,272	+		ABIE40_RS16610	0.71	-2.4
3,308,273	-		ABIE40_RS16610	0.71	+1.1
3,308,287	+		ABIE40_RS16610	0.73	+0.2
3,308,287	+		ABIE40_RS16610	0.73	+0.1
3,308,287	+		ABIE40_RS16610	0.73	-0.2
3,308,287	+		ABIE40_RS16610	0.73	-1.7
3,308,287	+		ABIE40_RS16610	0.73	-0.1
3,308,287	+		ABIE40_RS16610	0.73	-0.6
3,308,288	-		ABIE40_RS16610	0.73	-1.9
3,308,288	-		ABIE40_RS16610	0.73	+1.7
3,308,288	-		ABIE40_RS16610	0.73	-0.3
3,308,288	-		ABIE40_RS16610	0.73	-0.2
3,308,288	-		ABIE40_RS16610	0.73	-0.1
3,308,288	-		ABIE40_RS16610	0.73	+0.6
3,308,288	-		ABIE40_RS16610	0.73	-1.9
3,308,357	+		ABIE40_RS16610	0.82	-2.2
3,308,357	+		ABIE40_RS16610	0.82	-0.5
3,308,357	+		ABIE40_RS16610	0.82	+0.8
3,308,358	-		ABIE40_RS16610	0.82	-2.5
3,308,358	-		ABIE40_RS16610	0.82	+0.1
3,308,359	+		ABIE40_RS16610	0.83	-0.3
3,308,359	+		ABIE40_RS16610	0.83	+0.1
3,308,359	+		ABIE40_RS16610	0.83	-2.1
3,308,359	+		ABIE40_RS16610	0.83	-2.8
3,308,359	+		ABIE40_RS16610	0.83	-0.2
3,308,360	-		ABIE40_RS16610	0.83	-0.1
3,308,360	-		ABIE40_RS16610	0.83	+0.2
3,308,419	+				-0.6
3,308,420	-				-1.1
3,308,515	-				-0.5
3,308,523	+				-3.3
3,308,523	+				-0.9
3,308,524	-				+0.2
3,308,559	+				-1.6
3,308,578	-				-1.3
3,308,578	-				-1.1
3,308,614	+				-1.4
3,308,706	+				+0.5
3,308,725	+				+1.5
3,308,725	+				-2.0
3,308,725	+				-1.8
3,308,725	+				-2.3
3,308,725	+				-1.9
3,308,726	-				-1.1
3,308,727	-				+1.1
3,308,865	-		ABIE40_RS16615	0.10	-0.7
3,308,932	+		ABIE40_RS16615	0.13	-0.2
3,308,932	+		ABIE40_RS16615	0.13	-0.9
3,308,932	+		ABIE40_RS16615	0.13	-0.7
3,308,932	+		ABIE40_RS16615	0.13	-1.6
3,308,932	+		ABIE40_RS16615	0.13	-0.1
3,308,933	-		ABIE40_RS16615	0.13	-2.9
3,308,933	-		ABIE40_RS16615	0.13	-1.8
3,308,994	+		ABIE40_RS16615	0.16	-1.1
3,308,994	+		ABIE40_RS16615	0.16	-2.8
3,308,994	+		ABIE40_RS16615	0.16	-0.4
3,308,995	-		ABIE40_RS16615	0.16	+0.1
3,309,167	+		ABIE40_RS16615	0.23	-2.0
3,309,167	+		ABIE40_RS16615	0.23	-2.0
3,309,167	+		ABIE40_RS16615	0.23	-2.1
3,309,167	+		ABIE40_RS16615	0.23	-2.0
3,309,167	+		ABIE40_RS16615	0.23	-0.4
3,309,167	+		ABIE40_RS16615	0.23	-1.3
3,309,167	+		ABIE40_RS16615	0.23	-0.3
3,309,168	-		ABIE40_RS16615	0.23	-0.7
3,309,168	-		ABIE40_RS16615	0.23	-1.3
3,309,168	-		ABIE40_RS16615	0.23	-0.2
3,309,168	-		ABIE40_RS16615	0.23	-1.3
3,309,237	-		ABIE40_RS16615	0.26	-0.8
3,309,349	+		ABIE40_RS16615	0.31	+0.1
3,309,349	+		ABIE40_RS16615	0.31	-0.3
3,309,350	-		ABIE40_RS16615	0.31	-1.1
3,309,361	+		ABIE40_RS16615	0.32	-0.4
3,309,430	+		ABIE40_RS16615	0.35	-1.8
3,309,515	+		ABIE40_RS16615	0.38	-3.4
3,309,515	+		ABIE40_RS16615	0.38	+1.9
3,309,516	-		ABIE40_RS16615	0.38	-3.0
3,309,516	-		ABIE40_RS16615	0.38	-0.7
3,309,578	+		ABIE40_RS16615	0.41	-2.4
3,309,605	-		ABIE40_RS16615	0.42	-0.7
3,309,605	-		ABIE40_RS16615	0.42	-1.2
3,309,779	+		ABIE40_RS16615	0.50	-0.4
3,309,779	+		ABIE40_RS16615	0.50	+0.3
3,309,938	+		ABIE40_RS16615	0.57	-1.1
3,309,938	+		ABIE40_RS16615	0.57	-1.2
3,309,938	+		ABIE40_RS16615	0.57	-1.9
3,309,939	-		ABIE40_RS16615	0.57	-1.1
3,309,939	-		ABIE40_RS16615	0.57	+1.1
3,309,939	-		ABIE40_RS16615	0.57	-0.1
3,309,939	-		ABIE40_RS16615	0.57	-2.8
3,309,939	-		ABIE40_RS16615	0.57	-0.9
3,309,939	-		ABIE40_RS16615	0.57	-2.2
3,309,939	-		ABIE40_RS16615	0.57	-1.5
3,310,142	-		ABIE40_RS16615	0.66	+2.1
3,310,352	-		ABIE40_RS16615	0.75	+0.5
3,310,516	+		ABIE40_RS16615	0.82	-2.8
3,310,516	+		ABIE40_RS16615	0.82	-0.2
3,310,516	+		ABIE40_RS16615	0.82	-1.1
3,310,657	+		ABIE40_RS16615	0.88	+0.5
3,310,657	+		ABIE40_RS16615	0.88	-1.8
3,310,657	+		ABIE40_RS16615	0.88	-1.0
3,310,657	+		ABIE40_RS16615	0.88	-0.2
3,310,657	+		ABIE40_RS16615	0.88	-1.3
3,310,657	+		ABIE40_RS16615	0.88	+1.4
3,310,657	+		ABIE40_RS16615	0.88	-2.3
3,310,657	+		ABIE40_RS16615	0.88	-2.6
3,310,657	+		ABIE40_RS16615	0.88	-0.9
3,310,657	+		ABIE40_RS16615	0.88	+0.5
3,310,658	-		ABIE40_RS16615	0.88	+0.5
3,310,658	-		ABIE40_RS16615	0.88	-2.3
3,310,658	-		ABIE40_RS16615	0.88	-1.0
3,310,658	-		ABIE40_RS16615	0.88	-1.5
3,310,658	-		ABIE40_RS16615	0.88	-0.9
3,310,658	-		ABIE40_RS16615	0.88	+0.5
3,310,658	-		ABIE40_RS16615	0.88	-1.7
3,310,658	-		ABIE40_RS16615	0.88	-2.5
3,310,658	-		ABIE40_RS16615	0.88	-0.9
3,310,658	-		ABIE40_RS16615	0.88	-1.0
3,310,777	+				-1.5
3,310,777	+				-3.2
3,310,778	-				+0.9
3,310,780	+				-1.3
3,310,780	+				-2.2
3,310,780	+				-0.0
3,310,780	+				-2.6
3,310,780	+				+0.1
3,310,781	-				+1.1
3,310,781	-				-2.0
3,310,781	-				-1.0
3,310,781	-				-2.6
3,310,891	+				+2.1
3,310,891	+				-2.8
3,310,891	+				-1.3
3,310,891	+				-0.2
3,310,891	+				-0.5
3,310,891	+				+0.1
3,310,891	+				+0.5
3,310,891	+				-0.5
3,310,892	-				-1.2
3,310,892	-				-0.1
3,310,892	-				-0.2
3,310,892	-				-0.9
3,310,892	-				-2.6
3,310,892	-				-1.6
3,310,892	-				-3.4
3,310,892	-				-2.3
3,310,892	-				+1.1
3,310,892	-				+2.7
3,310,898	-				-0.9
3,310,919	+				+1.1
3,310,919	+				-0.5
3,310,919	+				-3.0
3,310,920	-				-0.8
3,310,920	-				-2.5
3,310,935	+				-1.0
3,310,935	+				-1.2
3,310,973	+				+2.1
3,311,000	-				+0.1
3,311,074	+				-0.3
3,311,098	+				-1.4
3,311,099	-				+0.5
3,311,153	+				-0.9
3,311,153	+				-1.5
3,311,154	-				+0.1
3,311,154	-				+0.8
3,311,175	-				-0.1
3,311,233	-				+1.1
3,311,324	+		ABIE40_RS16620	0.13	-0.2
3,311,324	+		ABIE40_RS16620	0.13	+1.1
3,311,325	-		ABIE40_RS16620	0.13	+1.1
3,311,325	-		ABIE40_RS16620	0.13	-2.2
3,311,325	-		ABIE40_RS16620	0.13	+1.4
3,311,325	-		ABIE40_RS16620	0.13	-0.3
3,311,325	-		ABIE40_RS16620	0.13	+0.5
3,311,325	-		ABIE40_RS16620	0.13	+0.4
3,311,375	+		ABIE40_RS16620	0.22	-0.6
3,311,376	-		ABIE40_RS16620	0.22	-1.0
3,311,377	+		ABIE40_RS16620	0.23	-1.0
3,311,377	+		ABIE40_RS16620	0.23	-0.0
3,311,377	+		ABIE40_RS16620	0.23	+0.7
3,311,377	+		ABIE40_RS16620	0.23	-0.2
3,311,377	+		ABIE40_RS16620	0.23	-1.8
3,311,377	+		ABIE40_RS16620	0.23	-2.5
3,311,377	+		ABIE40_RS16620	0.23	+0.1
3,311,378	-		ABIE40_RS16620	0.23	+0.6
3,311,378	-		ABIE40_RS16620	0.23	-1.5
3,311,378	-		ABIE40_RS16620	0.23	-0.2
3,311,388	-		ABIE40_RS16620	0.25	+0.9
3,311,388	-		ABIE40_RS16620	0.25	-1.2
3,311,421	-		ABIE40_RS16620	0.31	+0.5
3,311,421	-		ABIE40_RS16620	0.31	-0.5
3,311,433	-		ABIE40_RS16620	0.33	+0.1
3,311,433	-		ABIE40_RS16620	0.33	-1.3
3,311,433	-		ABIE40_RS16620	0.33	+1.0
3,311,433	-		ABIE40_RS16620	0.33	+1.5
3,311,433	-		ABIE40_RS16620	0.33	-0.4
3,311,498	+		ABIE40_RS16620	0.45	-0.7
3,311,498	+		ABIE40_RS16620	0.45	+1.0
3,311,498	+		ABIE40_RS16620	0.45	+0.6
3,311,499	-		ABIE40_RS16620	0.45	-0.8
3,311,499	-		ABIE40_RS16620	0.45	+1.4
3,311,600	+		ABIE40_RS16620	0.64	+2.7
3,311,601	-		ABIE40_RS16620	0.64	+0.6
3,311,774	+				-1.5
3,311,775	-				+0.4
3,311,792	+				-1.0
3,311,793	-				-0.2
3,311,793	-				+0.5
3,311,826	-				+2.1
3,311,826	-				-0.5
3,311,830	+				-0.5
3,311,830	+				-3.0
3,311,833	+				-0.3
3,311,833	+				+1.4
3,311,833	+				-1.5
3,311,834	-				-0.2
3,311,876	+				-0.7
3,311,876	+				-0.4
3,311,876	+				-1.0
3,311,876	+				-0.2
3,311,877	-				-0.2
3,311,877	-				-2.4
3,311,877	-				-0.2
3,311,877	-				+0.5
3,311,877	-				+0.8
3,311,877	-				+1.1
3,311,877	-				-0.5