Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS07700

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
1,500,966	+		ABIE40_RS07695	0.44	-1.8
1,500,966	+		ABIE40_RS07695	0.44	-0.5
1,501,064	+		ABIE40_RS07695	0.49	+1.4
1,501,065	-		ABIE40_RS07695	0.49	+0.4
1,501,065	-		ABIE40_RS07695	0.49	-0.2
1,501,073	+		ABIE40_RS07695	0.50	-2.5
1,501,073	+		ABIE40_RS07695	0.50	-0.1
1,501,073	+		ABIE40_RS07695	0.50	-2.3
1,501,074	-		ABIE40_RS07695	0.50	+0.1
1,501,142	+		ABIE40_RS07695	0.54	-0.6
1,501,143	-		ABIE40_RS07695	0.54	+0.0
1,501,183	+		ABIE40_RS07695	0.56	-1.8
1,501,183	+		ABIE40_RS07695	0.56	-0.9
1,501,183	+		ABIE40_RS07695	0.56	-2.1
1,501,184	-		ABIE40_RS07695	0.56	+0.2
1,501,187	+		ABIE40_RS07695	0.56	-0.4
1,501,187	+		ABIE40_RS07695	0.56	-0.4
1,501,187	+		ABIE40_RS07695	0.56	+0.9
1,501,187	+		ABIE40_RS07695	0.56	-1.4
1,501,187	+		ABIE40_RS07695	0.56	+0.9
1,501,187	+		ABIE40_RS07695	0.56	+0.8
1,501,188	-		ABIE40_RS07695	0.56	+0.1
1,501,188	-		ABIE40_RS07695	0.56	-0.4
1,501,188	-		ABIE40_RS07695	0.56	+1.4
1,501,188	-		ABIE40_RS07695	0.56	+0.4
1,501,188	-		ABIE40_RS07695	0.56	-0.6
1,501,188	-		ABIE40_RS07695	0.56	+0.4
1,501,188	-		ABIE40_RS07695	0.56	+0.1
1,501,188	-		ABIE40_RS07695	0.56	-0.4
1,501,188	-		ABIE40_RS07695	0.56	-0.6
1,501,188	-		ABIE40_RS07695	0.56	+1.6
1,501,188	-		ABIE40_RS07695	0.56	+0.8
1,501,188	-		ABIE40_RS07695	0.56	+0.4
1,501,188	-		ABIE40_RS07695	0.56	+0.6
1,501,188	-		ABIE40_RS07695	0.56	-2.4
1,501,188	-		ABIE40_RS07695	0.56	-1.2
1,501,193	+		ABIE40_RS07695	0.57	+1.4
1,501,193	+		ABIE40_RS07695	0.57	-2.1
1,501,193	+		ABIE40_RS07695	0.57	+0.3
1,501,193	+		ABIE40_RS07695	0.57	+1.0
1,501,193	+		ABIE40_RS07695	0.57	+0.0
1,501,193	+		ABIE40_RS07695	0.57	-1.1
1,501,193	+		ABIE40_RS07695	0.57	+0.9
1,501,193	+		ABIE40_RS07695	0.57	-0.1
1,501,194	-		ABIE40_RS07695	0.57	-1.1
1,501,194	-		ABIE40_RS07695	0.57	+0.0
1,501,194	-		ABIE40_RS07695	0.57	+1.1
1,501,194	-		ABIE40_RS07695	0.57	-0.5
1,501,194	-		ABIE40_RS07695	0.57	-1.3
1,501,194	-		ABIE40_RS07695	0.57	-1.6
1,501,194	-		ABIE40_RS07695	0.57	+0.4
1,501,276	+		ABIE40_RS07695	0.62	+0.1
1,501,277	-		ABIE40_RS07695	0.62	+1.1
1,501,277	-		ABIE40_RS07695	0.62	+1.0
1,501,277	-		ABIE40_RS07695	0.62	+1.4
1,501,277	-		ABIE40_RS07695	0.62	-0.0
1,501,277	-		ABIE40_RS07695	0.62	+0.8
1,501,389	+		ABIE40_RS07695	0.68	-0.5
1,501,445	+		ABIE40_RS07695	0.71	-0.0
1,501,480	+		ABIE40_RS07695	0.73	+1.4
1,501,492	+		ABIE40_RS07695	0.74	-3.2
1,501,510	+		ABIE40_RS07695	0.75	+0.6
1,501,511	-		ABIE40_RS07695	0.75	-1.1
1,501,531	+		ABIE40_RS07695	0.76	-0.2
1,501,605	+		ABIE40_RS07695	0.81	-1.1
1,501,605	+		ABIE40_RS07695	0.81	-1.2
1,501,605	+		ABIE40_RS07695	0.81	+0.0
1,501,606	-		ABIE40_RS07695	0.81	-1.0
1,501,606	-		ABIE40_RS07695	0.81	-0.1
1,501,606	-		ABIE40_RS07695	0.81	-0.5
1,501,614	-		ABIE40_RS07695	0.81	+0.0
1,501,665	-		ABIE40_RS07695	0.84	-0.2
1,501,670	+		ABIE40_RS07695	0.84	-0.7
1,501,671	-		ABIE40_RS07695	0.84	-2.3
1,501,671	-		ABIE40_RS07695	0.84	-0.1
1,501,671	-		ABIE40_RS07695	0.84	+0.8
1,501,671	-		ABIE40_RS07695	0.84	-2.2
1,501,671	-		ABIE40_RS07695	0.84	-1.3
1,501,672	+		ABIE40_RS07695	0.84	+0.1
1,501,673	-		ABIE40_RS07695	0.85	-0.8
1,501,725	+		ABIE40_RS07695	0.88	-0.2
1,501,726	-		ABIE40_RS07695	0.88	-0.7
1,501,784	-				-0.8
1,501,825	+				-0.7
1,501,825	+				+1.4
1,501,826	-				-1.1
1,501,826	-				-0.2
1,501,882	+				+0.0
1,501,951	+				-1.3
1,501,951	+				-0.3
1,501,952	-				+0.5
1,501,952	-				+0.1
1,501,952	-				+0.2
1,501,952	-				-2.0
1,501,955	+				-1.2
1,501,955	+				-1.4
1,501,955	+				-0.4
1,501,955	+				-0.2
1,501,955	+				-0.2
1,501,955	+				-0.7
1,501,955	+				-0.2
1,501,955	+				+1.0
1,501,955	+				-0.2
1,501,955	+				+0.0
1,501,955	+				+1.1
1,501,955	+				-2.0
1,501,956	-				-0.0
1,501,956	-				+0.8
1,501,956	-				-0.8
1,501,956	-				+0.8
1,501,956	-				+1.4
1,501,956	-				+1.6
1,501,957	+				-2.2
1,501,957	+				+0.4
1,501,957	+				+0.2
1,501,958	-				-0.5
1,501,958	-				-2.8
1,501,981	+				+0.4
1,501,982	-				-0.6
1,501,982	-				-1.5
1,501,986	-				-0.3
1,501,996	-		ABIE40_RS07700	0.12	-0.8
1,502,026	-		ABIE40_RS07700	0.25	+0.0
1,502,026	-		ABIE40_RS07700	0.25	-0.6
1,502,026	-		ABIE40_RS07700	0.25	+0.9
1,502,026	-		ABIE40_RS07700	0.25	-1.2
1,502,036	+		ABIE40_RS07700	0.29	-0.2
1,502,036	-		ABIE40_RS07700	0.29	-0.2
1,502,036	-		ABIE40_RS07700	0.29	+0.8
1,502,043	+		ABIE40_RS07700	0.32	-1.0
1,502,043	+		ABIE40_RS07700	0.32	+2.9
1,502,044	-		ABIE40_RS07700	0.33	-0.5
1,502,074	+		ABIE40_RS07700	0.45	-2.8
1,502,074	+		ABIE40_RS07700	0.45	+0.6
1,502,074	+		ABIE40_RS07700	0.45	-2.0
1,502,074	+		ABIE40_RS07700	0.45	-1.1
1,502,074	+		ABIE40_RS07700	0.45	+0.0
1,502,075	-		ABIE40_RS07700	0.45	-0.8
1,502,075	-		ABIE40_RS07700	0.45	-3.1
1,502,075	-		ABIE40_RS07700	0.45	-1.0
1,502,075	-		ABIE40_RS07700	0.45	-0.4
1,502,075	-		ABIE40_RS07700	0.45	+0.7
1,502,075	-		ABIE40_RS07700	0.45	-2.5
1,502,075	-		ABIE40_RS07700	0.45	-0.7
1,502,098	+		ABIE40_RS07700	0.55	-2.6
1,502,098	+		ABIE40_RS07700	0.55	-1.1
1,502,099	-		ABIE40_RS07700	0.55	+0.4
1,502,099	-		ABIE40_RS07700	0.55	-1.4
1,502,184	+				-1.2
1,502,184	+				+0.9
1,502,229	+				-2.5
1,502,230	-				-0.2
1,502,230	-				+0.0
1,502,315	-				+0.8
1,502,315	-				+0.6
1,502,315	-				+1.4
1,502,318	+				-2.1
1,502,319	-				+1.0
1,502,331	+				-0.8
1,502,331	+				-1.2
1,503,135	+				+0.9
1,503,135	+				-1.1
1,503,136	-				-0.4
1,503,136	-				-0.5